RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 LINC00208Q96KT6 92 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 PRR15LQ9BU68 103 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 TMEM14CQ9P0S9 112 aa1.59□□□□□ -2.15
FOXN3-217ENST00000557572 DOT1LQ8TEK3 1739 aa1.59□□□□□ -2.16
FOXN3-217ENST00000557572 IFT172Q9UG01 1749 aa1.59□□□□□ -2.16
FOXN3-217ENST00000557572 CSMD1Q96PZ7 3565 aa1.59□□□□□ -2.16
FOXN3-217ENST00000557572 COL5A1P20908 1838 aaPredicted RBP1.59□□□□□ -2.16
FOXN3-217ENST00000557572 COL4A1P02462 1669 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.58□□□□□ -2.16
FOXN3-217ENST00000557572 IGKV2-40A0A087WW87 121 aaPredicted RBP1.58□□□□□ -2.16
FOXN3-217ENST00000557572 MYMXA0A1B0GTQ4 84 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 LOC285095A0A1B0GVY8 99 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 C7orf77A4D0Y5 90 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 UMAD1C9J7I0 102 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 M0R2N4 97 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 IGKV2D-40P01614 121 aaPredicted RBP1.58□□□□□ -2.16
FOXN3-217ENST00000557572 SMIM13P0DJ93 91 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 SAA2P0DJI9 122 aaPredicted RBP1.58□□□□□ -2.16
FOXN3-217ENST00000557572 SPINT3P49223 89 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 FXYD4P59646 89 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 Q86TA4 180 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 FDCSPQ8NFU4 85 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 AMELXQ99217 191 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 NBASA2RRP1 2371 aa1.58□□□□□ -2.16
FOXN3-217ENST00000557572 DDX60LQ5H9U9 1706 aaKnown RBP1.57□□□□□ -2.16
FOXN3-217ENST00000557572 RYR1P21817 5038 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 LOC110117498A0A087WWA1 95 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 F8VRH5 84 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 M0R3E3 92 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 ARMS2P0C7Q2 107 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 DEFB121Q5J5C9 76 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 PPP1R1CQ8WVI7 109 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 AHCTF1Q8WYP5 2266 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 CACNA1EQ15878 2313 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 SPTBN1Q01082 2364 aaKnown RBP1.57□□□□□ -2.16
FOXN3-217ENST00000557572 HIVEP3Q5T1R4 2406 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 CSMD2Q7Z408 3487 aa1.57□□□□□ -2.16
FOXN3-217ENST00000557572 MAP2P11137 1827 aaKnown RBP1.56□□□□□ -2.16
FOXN3-217ENST00000557572 ACACAQ13085 2346 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 TENM1Q9UKZ4 2725 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 AKAP9Q99996 3911 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 A0A087WVE0 104 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 M0R135 149 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 HCRTO43612 131 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 FAM74A4Q5TZK3 123 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 Q96NJ1 140 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 WFDC6Q9BQY6 131 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 LINC01558Q9Y6Z2 57 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 V9GYV3 84 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 COL6A6A6NMZ7 2263 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 MEGF8Q7Z7M0 2845 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 VPS13CQ709C8 3753 aa1.56□□□□□ -2.16
FOXN3-217ENST00000557572 SDK1Q7Z5N4 2213 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 ZNF831Q5JPB2 1677 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 ICE1Q9Y2F5 2266 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 FXYD1O00168 92 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 PLGLAQ15195 96 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 R4GMQ9 66 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 ANKRD36A6QL64 1941 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 MXRA5Q9NR99 2828 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 PCLOQ9Y6V0 5065 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 MED13LQ71F56 2210 aa1.55□□□□□ -2.16
FOXN3-217ENST00000557572 URB1O60287 2271 aaKnown RBP1.55□□□□□ -2.16
FOXN3-217ENST00000557572 FAM208AQ9UK61 1670 aaKnown RBP1.55□□□□□ -2.16
FOXN3-217ENST00000557572 A0A087WWC5 75 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 CEBPZOSA8MTT3 80 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 LOC730098B7Z3J9 87 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 LEPROTL1O95214 131 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 IGKV4-1P06312 121 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 ZNF137PP52743 207 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 Q6JHZ5 121 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 BAGE2Q86Y30 109 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 HILPDAQ9Y5L2 63 aa1.54□□□□□ -2.16
FOXN3-217ENST00000557572 TRGV2A0A075B6R0 118 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 TRGV1A0A0A0MS02 117 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 CTXND1A0A1B0GTU2 59 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 A0A1B0GWA3 101 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 C6orf201Q7Z4U5 140 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 OBSCN-AS1Q96MR7 158 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 CD163L1Q9NR16 1453 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 PLAC8Q9NZF1 115 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 UBE2D4Q9Y2X8 147 aa1.53□□□□□ -2.16
FOXN3-217ENST00000557572 CUBNO60494 3623 aa1.53□□□□□ -2.17
FOXN3-217ENST00000557572 CSPG4Q6UVK1 2322 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 LRRC37AA6NMS7 1700 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 UQCR11O14957 56 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 GCHFRP30047 84 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 GNGT1P63211 74 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 KRTAP13-4Q3LI77 160 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 GDF5OSQ5U4N7 250 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 BAGE3Q86Y29 109 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 SPRR4Q96PI1 79 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 DNAJC13O75165 2243 aa1.52□□□□□ -2.17
FOXN3-217ENST00000557572 APC2O95996 2303 aa1.51□□□□□ -2.17
FOXN3-217ENST00000557572 INTS1Q8N201 2190 aaKnown RBP1.51□□□□□ -2.17
FOXN3-217ENST00000557572 ANKRD50Q9ULJ7 1429 aa1.51□□□□□ -2.17
FOXN3-217ENST00000557572 NCOA6Q14686 2063 aaPredicted RBP1.51□□□□□ -2.17
FOXN3-217ENST00000557572 TRAV1-2A0A0B4J238 106 aa1.51□□□□□ -2.17
FOXN3-217ENST00000557572 D6R8Y8 96 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms