RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-225ENST00000557267 NCR2O95944 276 aa-0.9□□□□□ -2.55
KTN1-225ENST00000557267 IDO1P14902 403 aa-0.9□□□□□ -2.55
KTN1-225ENST00000557267 S100A10P60903 97 aa-0.9□□□□□ -2.55
KTN1-225ENST00000557267 LSM6P62312 80 aaKnown RBP-0.9□□□□□ -2.55
KTN1-225ENST00000557267 AKR1C8PQ5T2L2 129 aa-0.9□□□□□ -2.55
KTN1-225ENST00000557267 Q6AWC8 147 aa-0.9□□□□□ -2.55
KTN1-225ENST00000557267 EFCAB11Q9BUY7 163 aa-0.9□□□□□ -2.55
KTN1-225ENST00000557267 PVALEFA0A1B0GWK0 134 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 CPSF4LA6NMK7 179 aaKnown RBP-0.91□□□□□ -2.56
KTN1-225ENST00000557267 TMEM256-PLSCR3K7ERE1 68 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 ACYP2P14621 99 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 NPC2P61916 151 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 MIC13Q5XKP0 118 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 PATE2Q6UY27 113 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 Q6ZUT4 128 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 POPDC3Q9HBV1 291 aa-0.91□□□□□ -2.56
KTN1-225ENST00000557267 F2Z2F3 143 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 H0YJX3 145 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 PGRMC1O00264 195 aaKnown RBP-0.92□□□□□ -2.56
KTN1-225ENST00000557267 CYB5AP00167 134 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 IFI6P09912 130 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 HSD17B12Q53GQ0 312 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 FAM74A4Q5TZK3 123 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 PBDC1Q9BVG4 233 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 DPY30Q9C005 99 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 RERGLQ9H628 205 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 ARMC1Q9NVT9 282 aa-0.92□□□□□ -2.56
KTN1-225ENST00000557267 ZNF815PA8K554 130 aa-0.93□□□□□ -2.56
KTN1-225ENST00000557267 HMGN2P05204 90 aaKnown RBP-0.93□□□□□ -2.56
KTN1-225ENST00000557267 S100PP25815 95 aa-0.93□□□□□ -2.56
KTN1-225ENST00000557267 BORCS8Q96FH0 119 aa-0.93□□□□□ -2.56
KTN1-225ENST00000557267 ARHGAP5-AS1Q96IT6 56 aa-0.93□□□□□ -2.56
KTN1-225ENST00000557267 CCDC42Q96M95 316 aa-0.93□□□□□ -2.56
KTN1-225ENST00000557267 SMIM2Q9BVW6 85 aa-0.93□□□□□ -2.56
KTN1-225ENST00000557267 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.93□□□□□ -2.56
KTN1-225ENST00000557267 TRAV30A0A087WSZ9 112 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 TRAPPC2P0DI81 140 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 TRAPPC2BP0DI82 140 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 SLC25A6P12236 298 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 CKS1BP61024 79 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 S100A12P80511 92 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 MIR22HGQ0VDD5 57 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 COTL1Q14019 142 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 DEFB105AQ8NG35 78 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 FAM213BQ8TBF2 198 aa-0.94□□□□□ -2.56
KTN1-225ENST00000557267 LSM10Q969L4 123 aaKnown RBP-0.94□□□□□ -2.56
KTN1-225ENST00000557267 SNRNP25Q9BV90 132 aaKnown RBP-0.94□□□□□ -2.56
KTN1-225ENST00000557267 H7C1C5 153 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 M0QY20 66 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 NMBP08949 121 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 NCS1P62166 190 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 SNRPFP62306 86 aaKnown RBP-0.95□□□□□ -2.56
KTN1-225ENST00000557267 POU6F1Q14863 301 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 NMSQ5H8A3 153 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 XAF1Q6GPH4 301 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 COMMD6Q7Z4G1 85 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 STX19Q8N4C7 294 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 C5orf17Q8NAS9 161 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 FKBP11Q9NYL4 201 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 BET1LQ9NYM9 111 aa-0.95□□□□□ -2.56
KTN1-225ENST00000557267 TRAV13-1A0A0B4J241 112 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 UBE2L5PA0A1B0GUS4 154 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 APOC1P02654 83 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 CXCL1P09341 107 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 FGF7P21781 194 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 POLR2KP53803 58 aaKnown RBP-0.96□□□□□ -2.56
KTN1-225ENST00000557267 MRPS10P82664 201 aaKnown RBP-0.96□□□□□ -2.56
KTN1-225ENST00000557267 TMEM35BQ8NCS4 154 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 KCNQ1DNQ9H478 68 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 TOMM7Q9P0U1 55 aa-0.96□□□□□ -2.56
KTN1-225ENST00000557267 TEX49A0A1B0GTD5 131 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 PNMA8CA0A1B0GUJ8 204 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 GNG14A0A1W2PPG7 69 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 HMGN4O00479 90 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 HMGB3O15347 200 aaKnown RBP-0.97□□□□□ -2.56
KTN1-225ENST00000557267 RPP14O95059 124 aaKnown RBP-0.97□□□□□ -2.56
KTN1-225ENST00000557267 IGLC1P0CG04 106 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 RPL7P18124 248 aaKnown RBP-0.97□□□□□ -2.56
KTN1-225ENST00000557267 ZNF56Q15929 161 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 NCBP2-AS2Q69YL0 99 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 DCUN1D2Q6PH85 259 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 SNX29P2Q8IUI4 249 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 MUSTN1Q8IVN3 82 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 CDC26Q8NHZ8 85 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 FAM107BQ9H098 131 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 ABRACLQ9P1F3 81 aa-0.97□□□□□ -2.56
KTN1-225ENST00000557267 A0A1B0GWA3 101 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 IFITM5A6NNB3 132 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 F8VRH5 84 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 H7BZZ5 65 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 DBIP07108 87 aaKnown RBP-0.98□□□□□ -2.57
KTN1-225ENST00000557267 SNRPGP62308 76 aaKnown RBP-0.98□□□□□ -2.57
KTN1-225ENST00000557267 TMEM78Q5T7P6 136 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 ZNF818PQ6ZRF7 136 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 FXYD6Q9H0Q3 95 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 NDUFA4L2Q9NRX3 87 aa-0.98□□□□□ -2.57
KTN1-225ENST00000557267 A6NIN4 97 aa-0.99□□□□□ -2.57
KTN1-225ENST00000557267 CORTO00230 105 aa-0.99□□□□□ -2.57
KTN1-225ENST00000557267 LYRM1O43325 122 aa-0.99□□□□□ -2.57
KTN1-225ENST00000557267 RPL35P42766 123 aaKnown RBP-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms