RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 Q6JHZ5 121 aa12.49□□□□□ -0.41
FOXN3-214ENST00000557258 FAM19A1Q7Z5A9 133 aa12.48□□□□□ -0.41
FOXN3-214ENST00000557258 KRTAP7-1Q8IUC3 87 aa12.47□□□□□ -0.41
FOXN3-214ENST00000557258 SRRM2Q9UQ35 2752 aaKnown RBP12.47□□□□□ -0.41
FOXN3-214ENST00000557258 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.46□□□□□ -0.41
FOXN3-214ENST00000557258 C3orf22Q8N5N4 141 aa12.46□□□□□ -0.41
FOXN3-214ENST00000557258 UBL5Q9BZL1 73 aa12.44□□□□□ -0.42
FOXN3-214ENST00000557258 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
FOXN3-214ENST00000557258 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
FOXN3-214ENST00000557258 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.43□□□□□ -0.42
FOXN3-214ENST00000557258 HAMPP81172 84 aa12.43□□□□□ -0.42
FOXN3-214ENST00000557258 UBE2DNLQ8IWF7 75 aa12.43□□□□□ -0.42
FOXN3-214ENST00000557258 SCXQ7RTU7 201 aa12.42□□□□□ -0.42
FOXN3-214ENST00000557258 LOC110117498A0A087WWA1 95 aa12.42□□□□□ -0.42
FOXN3-214ENST00000557258 KCNQ1DNQ9H478 68 aa12.42□□□□□ -0.42
FOXN3-214ENST00000557258 PSCAO43653 123 aa12.4□□□□□ -0.42
FOXN3-214ENST00000557258 RMI2Q96E14 147 aa12.4□□□□□ -0.42
FOXN3-214ENST00000557258 TRBV7-6A0A0J9YX20 115 aa12.39□□□□□ -0.43
FOXN3-214ENST00000557258 ST20-AS1Q8NBB2 130 aa12.39□□□□□ -0.43
FOXN3-214ENST00000557258 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
FOXN3-214ENST00000557258 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
FOXN3-214ENST00000557258 TLX1NBP0CAT3 122 aa12.38□□□□□ -0.43
FOXN3-214ENST00000557258 Q6ZVQ6 151 aa12.38□□□□□ -0.43
FOXN3-214ENST00000557258 Q9BRP9 147 aa12.38□□□□□ -0.43
FOXN3-214ENST00000557258 F8WDY8 70 aa12.37□□□□□ -0.43
FOXN3-214ENST00000557258 TRBV7-4A0A0J9YYF1 115 aa12.36□□□□□ -0.43
FOXN3-214ENST00000557258 IGLV1-50A0A075B6I6 118 aa12.36□□□□□ -0.43
FOXN3-214ENST00000557258 C9orf153Q5TBE3 101 aa12.36□□□□□ -0.43
FOXN3-214ENST00000557258 MEGF8Q7Z7M0 2845 aa12.35□□□□□ -0.43
FOXN3-214ENST00000557258 LINC01547P58512 204 aaPredicted RBP12.35□□□□□ -0.43
FOXN3-214ENST00000557258 MRPL55Q7Z7F7 128 aaKnown RBP12.35□□□□□ -0.43
FOXN3-214ENST00000557258 ETDCA0A1B0GVM5 59 aa12.34□□□□□ -0.43
FOXN3-214ENST00000557258 Q8N377 158 aa12.34□□□□□ -0.43
FOXN3-214ENST00000557258 A0A096LNI7 61 aa12.34□□□□□ -0.43
FOXN3-214ENST00000557258 ERC2-IT1O76042 136 aa12.34□□□□□ -0.43
FOXN3-214ENST00000557258 C3orf84H3BNL1 204 aa12.34□□□□□ -0.43
FOXN3-214ENST00000557258 Q6ZRX8 168 aa12.34□□□□□ -0.43
FOXN3-214ENST00000557258 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.44
FOXN3-214ENST00000557258 ATOX1O00244 68 aa12.33□□□□□ -0.44
FOXN3-214ENST00000557258 CYSTM1Q9H1C7 97 aa12.33□□□□□ -0.44
FOXN3-214ENST00000557258 APLNQ9ULZ1 77 aa12.33□□□□□ -0.44
FOXN3-214ENST00000557258 STARD9Q9P2P6 4700 aa12.32□□□□□ -0.44
FOXN3-214ENST00000557258 CHTF8P0CG12 524 aa12.32□□□□□ -0.44
FOXN3-214ENST00000557258 DNHD1Q96M86 4753 aa12.3□□□□□ -0.44
FOXN3-214ENST00000557258 KRTAP4-16G5E9R7 235 aaPredicted RBP12.3□□□□□ -0.44
FOXN3-214ENST00000557258 UBE2BP63146 152 aa12.3□□□□□ -0.44
FOXN3-214ENST00000557258 A0A1W2PNN7 141 aa12.29□□□□□ -0.44
FOXN3-214ENST00000557258 UQCRQO14949 82 aa12.29□□□□□ -0.44
FOXN3-214ENST00000557258 COX7CP15954 63 aa12.29□□□□□ -0.44
FOXN3-214ENST00000557258 Q8N9L7 120 aa12.29□□□□□ -0.44
FOXN3-214ENST00000557258 PLA2G2DQ9UNK4 145 aa12.28□□□□□ -0.44
FOXN3-214ENST00000557258 A0A0G2JQZ4 141 aa12.27□□□□□ -0.44
FOXN3-214ENST00000557258 ATP5EP2Q5VTU8 51 aa12.27□□□□□ -0.44
FOXN3-214ENST00000557258 H3BQ85 93 aa12.27□□□□□ -0.45
FOXN3-214ENST00000557258 GHRHP01286 108 aa12.27□□□□□ -0.45
FOXN3-214ENST00000557258 PDE6GP18545 87 aa12.27□□□□□ -0.45
FOXN3-214ENST00000557258 PRLHP81277 87 aa12.27□□□□□ -0.45
FOXN3-214ENST00000557258 FUSP35637 526 aaKnown RBP eCLIP12.26□□□□□ -0.453e-8■□□□□ 10.9
FOXN3-214ENST00000557258 PRYO14603 147 aa12.26□□□□□ -0.45
FOXN3-214ENST00000557258 B9D2Q9BPU9 175 aa12.26□□□□□ -0.45
FOXN3-214ENST00000557258 TGP01266 2768 aa12.26□□□□□ -0.45
FOXN3-214ENST00000557258 IGLV5-37A0A075B6J1 123 aa12.24□□□□□ -0.45
FOXN3-214ENST00000557258 SPRR1AP35321 89 aa12.24□□□□□ -0.45
FOXN3-214ENST00000557258 DHRS4-AS1Q9P1J3 65 aa12.24□□□□□ -0.45
FOXN3-214ENST00000557258 REG3GQ6UW15 175 aa12.23□□□□□ -0.45
FOXN3-214ENST00000557258 DYNC2H1Q8NCM8 4307 aaKnown RBP12.23□□□□□ -0.45
FOXN3-214ENST00000557258 SERP2Q8N6R1 65 aa12.22□□□□□ -0.45
FOXN3-214ENST00000557258 KRTAP11-1Q8IUC1 163 aa12.21□□□□□ -0.45
FOXN3-214ENST00000557258 KMT2AQ03164 3969 aa12.2□□□□□ -0.46
FOXN3-214ENST00000557258 C16orf90A8MZG2 172 aa12.2□□□□□ -0.46
FOXN3-214ENST00000557258 PHF5AQ7RTV0 110 aaKnown RBP12.2□□□□□ -0.46
FOXN3-214ENST00000557258 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
FOXN3-214ENST00000557258 CNBPP62633 177 aaKnown RBP12.17□□□□□ -0.46
FOXN3-214ENST00000557258 NREPQ16612 68 aa12.16□□□□□ -0.46
FOXN3-214ENST00000557258 BPY2O14599 106 aa12.16□□□□□ -0.46
FOXN3-214ENST00000557258 C1orf137Q5JT78 98 aa12.16□□□□□ -0.46
FOXN3-214ENST00000557258 A0A1W2PNM2 257 aa12.15□□□□□ -0.46
FOXN3-214ENST00000557258 PANO1I0J062 215 aa12.15□□□□□ -0.46
FOXN3-214ENST00000557258 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
FOXN3-214ENST00000557258 IGLV5-48A0A075B6I7 105 aa12.14□□□□□ -0.47
FOXN3-214ENST00000557258 CXCL6P80162 114 aa12.14□□□□□ -0.47
FOXN3-214ENST00000557258 CRYGAP11844 174 aa12.13□□□□□ -0.47
FOXN3-214ENST00000557258 DPH3Q96FX2 82 aa12.13□□□□□ -0.47
FOXN3-214ENST00000557258 LRCOL1A6NCL2 159 aa12.12□□□□□ -0.47
FOXN3-214ENST00000557258 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
FOXN3-214ENST00000557258 TNP2Q05952 138 aa12.1□□□□□ -0.47
FOXN3-214ENST00000557258 SMIM29Q86T20 159 aa12.09□□□□□ -0.47
FOXN3-214ENST00000557258 NUPR2A6NF83 97 aa12.08□□□□□ -0.48
FOXN3-214ENST00000557258 J3KT08 172 aa12.08□□□□□ -0.48
FOXN3-214ENST00000557258 DNAH2Q9P225 4427 aa12.06□□□□□ -0.48
FOXN3-214ENST00000557258 LINC00476Q8WZB0 136 aa12.06□□□□□ -0.48
FOXN3-214ENST00000557258 Q6ZRN7 208 aaPredicted RBP12.06□□□□□ -0.48
FOXN3-214ENST00000557258 VPS13DQ5THJ4 4388 aa12.06□□□□□ -0.48
FOXN3-214ENST00000557258 DEFB116Q30KQ4 102 aa12.05□□□□□ -0.48
FOXN3-214ENST00000557258 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
FOXN3-214ENST00000557258 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
FOXN3-214ENST00000557258 IGKV4-1P06312 121 aa12.04□□□□□ -0.48
FOXN3-214ENST00000557258 SNURFQ9Y675 71 aa12.04□□□□□ -0.48
FOXN3-214ENST00000557258 EPM2AB3EWF7 344 aa12.04□□□□□ -0.48
FOXN3-214ENST00000557258 FBN3Q75N90 2809 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms