RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 RAB5AP20339 215 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 HERVK_113P63121 156 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 COX19Q49B96 90 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 MRPL51Q4U2R6 128 aaKnown RBP2.4□□□□□ -2.03
SCFD1-223ENST00000557076 PDZD11Q5EBL8 140 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 S100ZQ8WXG8 99 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 SMIM2Q9BVW6 85 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 MAP1LC3CQ9BXW4 147 aa2.4□□□□□ -2.03
SCFD1-223ENST00000557076 C20orf202A1L168 122 aa2.39□□□□□ -2.03
SCFD1-223ENST00000557076 HSBP1O75506 76 aa2.39□□□□□ -2.03
SCFD1-223ENST00000557076 CKS2P33552 79 aa2.39□□□□□ -2.03
SCFD1-223ENST00000557076 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
SCFD1-223ENST00000557076 IGIPA6NJ69 53 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 LINC00614P0C842 121 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 SPRR1AP35321 89 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 COX17Q14061 63 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 UQCC3Q6UW78 93 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 COX7B2Q8TF08 81 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 LIMD2Q9BT23 127 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 KCNQ1DNQ9H478 68 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 SND1-IT1Q9HBX3 110 aa2.38□□□□□ -2.03
SCFD1-223ENST00000557076 A0A1B0GV72 72 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 E9PLD3 99 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 ARPC5O15511 151 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 ATP5LO75964 103 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 PPBPP02775 128 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 PFN2P35080 140 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 CXCL6P80162 114 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 MTURNQ8N3F0 131 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 V9GYY9 64 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
SCFD1-223ENST00000557076 D6R8Y8 96 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 F8W036 122 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 ERC2-IT1O76042 136 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 Q8NDZ9 215 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 TIMM17AQ99595 171 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 OSTCQ9NRP0 149 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 CYSLTR1Q9Y271 337 aa2.36□□□□□ -2.03
SCFD1-223ENST00000557076 TRAV9-1A0A075B6T8 112 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 ETDCA0A1B0GVM5 59 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 TINCRA0A1B0GVN0 87 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 TMEM250H0YL14 139 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 NPYP01303 97 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 ZNF345Q14585 488 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 C10orf91Q5T1B1 145 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 Q5XG85 94 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 ATP11AUNQ6ZP68 121 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 NAT8BQ9UHF3 227 aa2.35□□□□□ -2.03
SCFD1-223ENST00000557076 LOC389332A0A1B0GUA5 103 aa2.34□□□□□ -2.03
SCFD1-223ENST00000557076 HMSDA8MTL9 139 aa2.34□□□□□ -2.03
SCFD1-223ENST00000557076 S100PP25815 95 aa2.34□□□□□ -2.03
SCFD1-223ENST00000557076 CD164Q04900 197 aa2.34□□□□□ -2.03
SCFD1-223ENST00000557076 C9orf153Q5TBE3 101 aa2.34□□□□□ -2.03
SCFD1-223ENST00000557076 TMEM136Q6ZRR5 245 aa2.34□□□□□ -2.03
SCFD1-223ENST00000557076 SPANXB1Q9NS25 103 aaPredicted RBP2.34□□□□□ -2.03
SCFD1-223ENST00000557076 V9GYV3 84 aa2.34□□□□□ -2.03
SCFD1-223ENST00000557076 TRBV20-1A0A075B6N2 111 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 KANTRA0A1W2PQU2 76 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 SMIM27A0A1W2PRY6 76 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 K7EMI3 77 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 S100A8P05109 93 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 SCGB1A1P11684 91 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 LGALS3P17931 250 aaKnown RBP2.33□□□□□ -2.04
SCFD1-223ENST00000557076 Q1RN00 199 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 ORMDL2Q53FV1 153 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 C1orf195Q5TG92 126 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 HRCT1Q6UXD1 115 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 ORMDL3Q8N138 153 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 PRELID3AQ96N28 172 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 Q9BRP9 147 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 ERG28Q9UKR5 140 aa2.33□□□□□ -2.04
SCFD1-223ENST00000557076 LINC00587B1AMM8 73 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 TSTD3H0UI37 97 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 SPINK8P0C7L1 97 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 SFTA2Q6UW10 78 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 ALKAL2Q6UX46 152 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 Q8N8P6 123 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 C12orf57Q99622 126 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 LAMTOR2Q9Y2Q5 125 aa2.32□□□□□ -2.04
SCFD1-223ENST00000557076 H3BRM9 83 aa2.31□□□□□ -2.04
SCFD1-223ENST00000557076 C6orf99Q4VX62 202 aa2.31□□□□□ -2.04
SCFD1-223ENST00000557076 SLC25A34Q6PIV7 304 aa2.31□□□□□ -2.04
SCFD1-223ENST00000557076 Q6ZRX8 168 aa2.31□□□□□ -2.04
SCFD1-223ENST00000557076 TOMM6Q96B49 74 aa2.31□□□□□ -2.04
SCFD1-223ENST00000557076 C20orf166-AS1Q96NR2 134 aa2.31□□□□□ -2.04
SCFD1-223ENST00000557076 CST9LQ9H4G1 147 aa2.31□□□□□ -2.04
SCFD1-223ENST00000557076 TRBV10-3A0A0K0K1G6 114 aa2.3□□□□□ -2.04
SCFD1-223ENST00000557076 A0A1B0GXF2 115 aa2.3□□□□□ -2.04
SCFD1-223ENST00000557076 SPRR1BP22528 89 aa2.3□□□□□ -2.04
SCFD1-223ENST00000557076 LINC00158P58513 81 aa2.3□□□□□ -2.04
SCFD1-223ENST00000557076 JOSD1Q15040 202 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-223ENST00000557076 TAL2Q16559 108 aa2.3□□□□□ -2.04
SCFD1-223ENST00000557076 ZNF625Q96I27 306 aaPredicted RBP2.3□□□□□ -2.04
SCFD1-223ENST00000557076 SMIM7Q9BQ49 75 aa2.3□□□□□ -2.04
SCFD1-223ENST00000557076 MAP1LC3AQ9H492 121 aa2.3□□□□□ -2.04
SCFD1-223ENST00000557076 A0A1B0GV90 55 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms