RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 KRTAP13-1Q8IUC0 172 aa5.8□□□□□ -1.48
HNRNPC-228ENST00000557033 ZNF625Q96I27 306 aaPredicted RBP5.8□□□□□ -1.48
HNRNPC-228ENST00000557033 IGKV2-28A0A075B6P5 120 aa5.78□□□□□ -1.48
HNRNPC-228ENST00000557033 KRTAP16-1A8MUX0 517 aa5.78□□□□□ -1.48
HNRNPC-228ENST00000557033 IGKV2D-28P01615 120 aa5.78□□□□□ -1.48
HNRNPC-228ENST00000557033 LINC00158P58513 81 aa5.78□□□□□ -1.48
HNRNPC-228ENST00000557033 BOD1L2Q8IYS8 172 aa5.78□□□□□ -1.48
HNRNPC-228ENST00000557033 LINC00587B1AMM8 73 aa5.77□□□□□ -1.49
HNRNPC-228ENST00000557033 SCO1O75880 301 aa5.77□□□□□ -1.49
HNRNPC-228ENST00000557033 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
HNRNPC-228ENST00000557033 FAM19A1Q7Z5A9 133 aa5.77□□□□□ -1.49
HNRNPC-228ENST00000557033 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
HNRNPC-228ENST00000557033 TMEM126AQ9H061 195 aa5.77□□□□□ -1.49
HNRNPC-228ENST00000557033 TRGC2P03986 189 aa5.76□□□□□ -1.49
HNRNPC-228ENST00000557033 COA6Q5JTJ3 125 aaKnown RBP5.76□□□□□ -1.49
HNRNPC-228ENST00000557033 FAM19A2Q8N3H0 131 aa5.76□□□□□ -1.49
HNRNPC-228ENST00000557033 LPAP08519 4548 aa5.76□□□□□ -1.49
HNRNPC-228ENST00000557033 M0R378 163 aa5.75□□□□□ -1.49
HNRNPC-228ENST00000557033 LEPROTL1O95214 131 aa5.75□□□□□ -1.49
HNRNPC-228ENST00000557033 Q8NDZ9 215 aa5.75□□□□□ -1.49
HNRNPC-228ENST00000557033 MYMXA0A1B0GTQ4 84 aa5.74□□□□□ -1.49
HNRNPC-228ENST00000557033 TMEM238C9JI98 176 aa5.74□□□□□ -1.49
HNRNPC-228ENST00000557033 SMIM13P0DJ93 91 aa5.74□□□□□ -1.49
HNRNPC-228ENST00000557033 PRLHP81277 87 aa5.74□□□□□ -1.49
HNRNPC-228ENST00000557033 MEIG1Q5JSS6 88 aa5.74□□□□□ -1.49
HNRNPC-228ENST00000557033 IGKV2D-26A0A0A0MRZ7 120 aa5.73□□□□□ -1.49
HNRNPC-228ENST00000557033 CTAG1AP78358 180 aa5.73□□□□□ -1.49
HNRNPC-228ENST00000557033 Q6ZVH6 145 aa5.73□□□□□ -1.49
HNRNPC-228ENST00000557033 CEND1Q8N111 149 aa5.73□□□□□ -1.49
HNRNPC-228ENST00000557033 PLEKHB2Q96CS7 222 aa5.73□□□□□ -1.49
HNRNPC-228ENST00000557033 ANAPC11Q9NYG5 84 aa5.73□□□□□ -1.49
HNRNPC-228ENST00000557033 HSPB8Q9UJY1 196 aa5.73□□□□□ -1.49
HNRNPC-228ENST00000557033 PLNP26678 52 aa5.72□□□□□ -1.49
HNRNPC-228ENST00000557033 KRTAP13-2Q52LG2 175 aa5.72□□□□□ -1.49
HNRNPC-228ENST00000557033 MIR7-3HGQ8N6C7 128 aa5.72□□□□□ -1.49
HNRNPC-228ENST00000557033 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
HNRNPC-228ENST00000557033 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
HNRNPC-228ENST00000557033 COLCA2A8K830 154 aa5.71□□□□□ -1.5
HNRNPC-228ENST00000557033 LEPROTO15243 131 aa5.71□□□□□ -1.5
HNRNPC-228ENST00000557033 SLC7A5P1Q8MH63 180 aa5.71□□□□□ -1.5
HNRNPC-228ENST00000557033 LOC107984156A0A0G2JMH3 177 aa5.7□□□□□ -1.5
HNRNPC-228ENST00000557033 SPRR1AP35321 89 aa5.7□□□□□ -1.5
HNRNPC-228ENST00000557033 S100A12P80511 92 aa5.7□□□□□ -1.5
HNRNPC-228ENST00000557033 ARL17AQ8IVW1 177 aa5.7□□□□□ -1.5
HNRNPC-228ENST00000557033 LINC00337Q8N6G1 96 aa5.7□□□□□ -1.5
HNRNPC-228ENST00000557033 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
HNRNPC-228ENST00000557033 KCNQ1DNQ9H478 68 aa5.7□□□□□ -1.5
HNRNPC-228ENST00000557033 J3QQQ9 107 aa5.69□□□□□ -1.5
HNRNPC-228ENST00000557033 DPM2O94777 84 aa5.69□□□□□ -1.5
HNRNPC-228ENST00000557033 FABP4P15090 132 aa5.69□□□□□ -1.5
HNRNPC-228ENST00000557033 NMUP48645 174 aa5.69□□□□□ -1.5
HNRNPC-228ENST00000557033 HERVK_113P61574 105 aa5.69□□□□□ -1.5
HNRNPC-228ENST00000557033 HIGD2AQ9BW72 106 aa5.69□□□□□ -1.5
HNRNPC-228ENST00000557033 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
HNRNPC-228ENST00000557033 IGKCP01834 107 aa5.68□□□□□ -1.5
HNRNPC-228ENST00000557033 TRBV10-2A0A0K0K1G8 114 aa5.67□□□□□ -1.5
HNRNPC-228ENST00000557033 FAM240AA0A1B0GVK7 77 aa5.67□□□□□ -1.5
HNRNPC-228ENST00000557033 NCR3O14931 201 aa5.67□□□□□ -1.5
HNRNPC-228ENST00000557033 TSPEAR-AS2P59090 65 aa5.67□□□□□ -1.5
HNRNPC-228ENST00000557033 SPAG11AQ6PDA7 123 aa5.67□□□□□ -1.5
HNRNPC-228ENST00000557033 SPRR4Q96PI1 79 aa5.67□□□□□ -1.5
HNRNPC-228ENST00000557033 TRBV10-3A0A0K0K1G6 114 aa5.66□□□□□ -1.5
HNRNPC-228ENST00000557033 ETDCA0A1B0GVM5 59 aa5.66□□□□□ -1.5
HNRNPC-228ENST00000557033 NDUFC2O95298 119 aa5.66□□□□□ -1.5
HNRNPC-228ENST00000557033 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
HNRNPC-228ENST00000557033 SMCR5Q8TEV8 140 aa5.66□□□□□ -1.5
HNRNPC-228ENST00000557033 MIEN1Q9BRT3 115 aa5.66□□□□□ -1.5
HNRNPC-228ENST00000557033 PMCHL2Q9BQD1 86 aa5.65□□□□□ -1.5
HNRNPC-228ENST00000557033 DDTP30046 118 aa5.64□□□□□ -1.51
HNRNPC-228ENST00000557033 C3orf22Q8N5N4 141 aa5.64□□□□□ -1.51
HNRNPC-228ENST00000557033 DAND5Q8N907 189 aa5.64□□□□□ -1.51
HNRNPC-228ENST00000557033 SPANXB1Q9NS25 103 aaPredicted RBP5.64□□□□□ -1.51
HNRNPC-228ENST00000557033 CD164Q04900 197 aa5.63□□□□□ -1.51
HNRNPC-228ENST00000557033 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
HNRNPC-228ENST00000557033 CBY1Q9Y3M2 126 aa5.63□□□□□ -1.51
HNRNPC-228ENST00000557033 SYS1-DBNDD2H3BUS1 97 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BKO60814 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 IGLV6-57P01721 117 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BJP06899 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BOP23527 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BBP33778 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BDP58876 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BCP62807 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST2H2BEQ16778 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 S100A7L2Q5SY68 101 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BHQ93079 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BNQ99877 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 HIST1H2BMQ99879 126 aa5.62□□□□□ -1.51
HNRNPC-228ENST00000557033 SMIM26A0A096LP01 95 aa5.61□□□□□ -1.51
HNRNPC-228ENST00000557033 TPRXLQ17RH7 258 aa5.61□□□□□ -1.51
HNRNPC-228ENST00000557033 RETNLBQ9BQ08 111 aa5.61□□□□□ -1.51
HNRNPC-228ENST00000557033 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
HNRNPC-228ENST00000557033 MUC2Q02817 5179 aa5.61□□□□□ -1.51
HNRNPC-228ENST00000557033 SPINK1P00995 79 aa5.6□□□□□ -1.51
HNRNPC-228ENST00000557033 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
HNRNPC-228ENST00000557033 Q6ZRX8 168 aa5.6□□□□□ -1.51
HNRNPC-228ENST00000557033 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.51
HNRNPC-228ENST00000557033 TIMM17BO60830 172 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms