RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CIRBPQ14011 172 aaKnown RBP3.35□□□□□ -1.87
ATXN3-244ENST00000556898 FAM19A5Q7Z5A7 132 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-244ENST00000556898 MYCBP2O75592 4640 aa3.35□□□□□ -1.87
ATXN3-244ENST00000556898 A4D1N5 150 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 LINC00587B1AMM8 73 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 K7ERJ3 54 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 NCR3O14931 201 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 SMR3BP02814 79 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-244ENST00000556898 HSD52Q0P140 79 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 COX17Q14061 63 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 CEND1Q8N111 149 aa3.34□□□□□ -1.87
ATXN3-244ENST00000556898 IGKV2-28A0A075B6P5 120 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 GAGE10A6NGK3 116 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 IGKV2D-28P01615 120 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 VPREB1P12018 145 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 BATFQ16520 125 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 BVES-AS1Q5T3Y7 98 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 PHF5AQ7RTV0 110 aaKnown RBP3.33□□□□□ -1.88
ATXN3-244ENST00000556898 KRTAP11-1Q8IUC1 163 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 SPACA4Q8TDM5 124 aa3.33□□□□□ -1.88
ATXN3-244ENST00000556898 A0A087WYN8 130 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 LOC107984156A0A0G2JMH3 177 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 IFITM1P13164 125 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 TAL2Q16559 108 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 ARL17AQ8IVW1 177 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 LINC00337Q8N6G1 96 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 DPH3Q96FX2 82 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 C22orf24Q9Y442 160 aa3.32□□□□□ -1.88
ATXN3-244ENST00000556898 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-244ENST00000556898 CFC1BP0CG36 223 aa3.31□□□□□ -1.88
ATXN3-244ENST00000556898 CFC1P0CG37 223 aa3.31□□□□□ -1.88
ATXN3-244ENST00000556898 Q6ZVH6 145 aa3.31□□□□□ -1.88
ATXN3-244ENST00000556898 SCXQ7RTU7 201 aa3.31□□□□□ -1.88
ATXN3-244ENST00000556898 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
ATXN3-244ENST00000556898 LINC00167Q96N53 147 aa3.31□□□□□ -1.88
ATXN3-244ENST00000556898 SNHG12Q9BXW3 62 aa3.31□□□□□ -1.88
ATXN3-244ENST00000556898 NHP2Q9NX24 153 aaKnown RBP3.31□□□□□ -1.88
ATXN3-244ENST00000556898 IGLV5-37A0A075B6J1 123 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 TRBV10-3A0A0K0K1G6 114 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 RPL37AP8A6NKH3 93 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 H7C2G1 150 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 M0QXV9 152 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 NDUFC2O95298 119 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 RPL24P83731 157 aaKnown RBP3.3□□□□□ -1.88
ATXN3-244ENST00000556898 Q6ZSA8 131 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 PRR26Q8N8Z3 221 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 OR13C6PQ8NH95 151 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 RAB37Q96AX2 223 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 NAA38Q9BRA0 125 aaKnown RBP3.3□□□□□ -1.88
ATXN3-244ENST00000556898 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
ATXN3-244ENST00000556898 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
ATXN3-244ENST00000556898 A6NDN8 102 aa3.29□□□□□ -1.88
ATXN3-244ENST00000556898 M0R378 163 aa3.29□□□□□ -1.88
ATXN3-244ENST00000556898 RPL13AP40429 203 aaKnown RBP3.29□□□□□ -1.88
ATXN3-244ENST00000556898 NKAPP1Q8N9T2 125 aa3.29□□□□□ -1.88
ATXN3-244ENST00000556898 PLAC8Q9NZF1 115 aa3.29□□□□□ -1.88
ATXN3-244ENST00000556898 VPS13BQ7Z7G8 4022 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 A0A0B4J2C4 111 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 M0R143 59 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 IGLV6-57P01721 117 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 S100A7L2Q5SY68 101 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 MRPL55Q7Z7F7 128 aaKnown RBP3.28□□□□□ -1.88
ATXN3-244ENST00000556898 PPDPFQ9H3Y8 114 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 PKIGQ9Y2B9 76 aa3.28□□□□□ -1.88
ATXN3-244ENST00000556898 IGLV1-50A0A075B6I6 118 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 TRBV10-2A0A0K0K1G8 114 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 TAX1BP3O14907 124 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 TSPAN13O95857 204 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 OXTP01178 125 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 UBE2BP63146 152 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 SMIM11BQ8TCY0 68 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 COPS9Q8WXC6 57 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 LINC00474Q9P2X8 69 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 PRO1854Q9UHT4 67 aa3.27□□□□□ -1.89
ATXN3-244ENST00000556898 TRAV23DV6A0A075B6W5 121 aa3.26□□□□□ -1.89
ATXN3-244ENST00000556898 TRAV13-2A0A0B4J235 113 aa3.26□□□□□ -1.89
ATXN3-244ENST00000556898 Q1RN00 199 aa3.26□□□□□ -1.89
ATXN3-244ENST00000556898 LBHQ53QV2 105 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-244ENST00000556898 PKHD1L1Q86WI1 4243 aa3.26□□□□□ -1.89
ATXN3-244ENST00000556898 PRLHP81277 87 aa3.25□□□□□ -1.89
ATXN3-244ENST00000556898 C6orf99Q4VX62 202 aa3.25□□□□□ -1.89
ATXN3-244ENST00000556898 TMEM126AQ9H061 195 aa3.25□□□□□ -1.89
ATXN3-244ENST00000556898 KCNQ1DNQ9H478 68 aa3.25□□□□□ -1.89
ATXN3-244ENST00000556898 PSORS1C2Q9UIG4 136 aa3.25□□□□□ -1.89
ATXN3-244ENST00000556898 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-244ENST00000556898 H3BUT2 72 aa3.24□□□□□ -1.89
ATXN3-244ENST00000556898 ZNF73O43830 326 aaPredicted RBP3.24□□□□□ -1.89
ATXN3-244ENST00000556898 SPRR1AP35321 89 aa3.24□□□□□ -1.89
ATXN3-244ENST00000556898 RPL28P46779 137 aaKnown RBP3.24□□□□□ -1.89
ATXN3-244ENST00000556898 C1orf137Q5JT78 98 aa3.24□□□□□ -1.89
ATXN3-244ENST00000556898 REG3GQ6UW15 175 aa3.24□□□□□ -1.89
ATXN3-244ENST00000556898 FAM19A1Q7Z5A9 133 aa3.24□□□□□ -1.89
ATXN3-244ENST00000556898 CLEC2BQ92478 149 aa3.24□□□□□ -1.89
ATXN3-244ENST00000556898 FAM218AQ96MZ4 157 aa3.24□□□□□ -1.89
ATXN3-244ENST00000556898 COX7BP24311 80 aa3.23□□□□□ -1.89
ATXN3-244ENST00000556898 PSMB2P49721 201 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms