RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 LEPROTL1O95214 131 aa7.52□□□□□ -1.21
ACTN1-219ENST00000556432 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
ACTN1-219ENST00000556432 TRAV12-1A0A0B4J245 112 aa7.51□□□□□ -1.21
ACTN1-219ENST00000556432 B5MCH6 92 aa7.51□□□□□ -1.21
ACTN1-219ENST00000556432 S100A1P23297 94 aa7.51□□□□□ -1.21
ACTN1-219ENST00000556432 PMCHL2Q9BQD1 86 aa7.51□□□□□ -1.21
ACTN1-219ENST00000556432 LIMD2Q9BT23 127 aa7.5□□□□□ -1.21
ACTN1-219ENST00000556432 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
ACTN1-219ENST00000556432 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
ACTN1-219ENST00000556432 HRCT1Q6UXD1 115 aa7.48□□□□□ -1.21
ACTN1-219ENST00000556432 Q9BRP9 147 aa7.48□□□□□ -1.21
ACTN1-219ENST00000556432 HSPB8Q9UJY1 196 aa7.48□□□□□ -1.21
ACTN1-219ENST00000556432 TMEM223A0PJW6 202 aa7.47□□□□□ -1.21
ACTN1-219ENST00000556432 IGLV6-57P01721 117 aa7.47□□□□□ -1.21
ACTN1-219ENST00000556432 Q6ZRX8 168 aa7.46□□□□□ -1.22
ACTN1-219ENST00000556432 MIR7-3HGQ8N6C7 128 aa7.46□□□□□ -1.22
ACTN1-219ENST00000556432 DDTP30046 118 aa7.45□□□□□ -1.22
ACTN1-219ENST00000556432 TSPEAR-AS2P59090 65 aa7.44□□□□□ -1.22
ACTN1-219ENST00000556432 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
ACTN1-219ENST00000556432 MAP1LC3CQ9BXW4 147 aa7.43□□□□□ -1.22
ACTN1-219ENST00000556432 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-219ENST00000556432 DPM2O94777 84 aa7.42□□□□□ -1.22
ACTN1-219ENST00000556432 JOSD1Q15040 202 aaPredicted RBP7.42□□□□□ -1.22
ACTN1-219ENST00000556432 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
ACTN1-219ENST00000556432 IGKCP01834 107 aa7.41□□□□□ -1.22
ACTN1-219ENST00000556432 PLNP26678 52 aa7.41□□□□□ -1.22
ACTN1-219ENST00000556432 ST20-AS1Q8NBB2 130 aa7.41□□□□□ -1.22
ACTN1-219ENST00000556432 C3orf79P0CE67 100 aa7.4□□□□□ -1.22
ACTN1-219ENST00000556432 Q6Q795 121 aa7.4□□□□□ -1.22
ACTN1-219ENST00000556432 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
ACTN1-219ENST00000556432 KRTDAPP60985 99 aa7.39□□□□□ -1.23
ACTN1-219ENST00000556432 HERV-K104P63124 156 aa7.39□□□□□ -1.23
ACTN1-219ENST00000556432 S100A7L2Q5SY68 101 aa7.39□□□□□ -1.23
ACTN1-219ENST00000556432 SSPOA2VEC9 5147 aa7.39□□□□□ -1.23
ACTN1-219ENST00000556432 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
ACTN1-219ENST00000556432 LINC01545Q5VT33 79 aa7.38□□□□□ -1.23
ACTN1-219ENST00000556432 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
ACTN1-219ENST00000556432 LEPROTO15243 131 aa7.37□□□□□ -1.23
ACTN1-219ENST00000556432 CFC1P0CG37 223 aa7.36□□□□□ -1.23
ACTN1-219ENST00000556432 HERVK_113P61574 105 aa7.36□□□□□ -1.23
ACTN1-219ENST00000556432 SLC25A34Q6PIV7 304 aa7.36□□□□□ -1.23
ACTN1-219ENST00000556432 PET117Q6UWS5 81 aa7.36□□□□□ -1.23
ACTN1-219ENST00000556432 HIST3H2BBQ8N257 126 aa7.36□□□□□ -1.23
ACTN1-219ENST00000556432 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-219ENST00000556432 USH2AO75445 5202 aa7.36□□□□□ -1.23
ACTN1-219ENST00000556432 TRAV23DV6A0A075B6W5 121 aa7.35□□□□□ -1.23
ACTN1-219ENST00000556432 H7C2G1 150 aa7.35□□□□□ -1.23
ACTN1-219ENST00000556432 J3QQQ9 107 aa7.35□□□□□ -1.23
ACTN1-219ENST00000556432 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
ACTN1-219ENST00000556432 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.23
ACTN1-219ENST00000556432 ATOH7Q8N100 152 aa7.34□□□□□ -1.23
ACTN1-219ENST00000556432 HIST1H2BLQ99880 126 aa7.34□□□□□ -1.23
ACTN1-219ENST00000556432 LAMTOR3Q9UHA4 124 aa7.34□□□□□ -1.23
ACTN1-219ENST00000556432 E9PLD3 99 aa7.33□□□□□ -1.24
ACTN1-219ENST00000556432 ZNF73O43830 326 aaPredicted RBP7.33□□□□□ -1.24
ACTN1-219ENST00000556432 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
ACTN1-219ENST00000556432 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
ACTN1-219ENST00000556432 HINT1P49773 126 aaPredicted RBP7.32□□□□□ -1.24
ACTN1-219ENST00000556432 C5orf52A6NGY3 159 aa7.31□□□□□ -1.24
ACTN1-219ENST00000556432 S100A6P06703 90 aa7.31□□□□□ -1.24
ACTN1-219ENST00000556432 S100A2P29034 98 aa7.31□□□□□ -1.24
ACTN1-219ENST00000556432 SNRPEP62304 92 aaKnown RBP7.31□□□□□ -1.24
ACTN1-219ENST00000556432 C20orf202A1L168 122 aa7.3□□□□□ -1.24
ACTN1-219ENST00000556432 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
ACTN1-219ENST00000556432 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
ACTN1-219ENST00000556432 LOC107984156A0A0G2JMH3 177 aa7.29□□□□□ -1.24
ACTN1-219ENST00000556432 NMUP48645 174 aa7.29□□□□□ -1.24
ACTN1-219ENST00000556432 CD164Q04900 197 aa7.29□□□□□ -1.24
ACTN1-219ENST00000556432 C1orf195Q5TG92 126 aa7.29□□□□□ -1.24
ACTN1-219ENST00000556432 ARL17AQ8IVW1 177 aa7.29□□□□□ -1.24
ACTN1-219ENST00000556432 A0A0J9YXY3 114 aa7.28□□□□□ -1.24
ACTN1-219ENST00000556432 SPRR1BP22528 89 aa7.28□□□□□ -1.24
ACTN1-219ENST00000556432 NPC2P61916 151 aa7.28□□□□□ -1.24
ACTN1-219ENST00000556432 Q1RN00 199 aa7.28□□□□□ -1.24
ACTN1-219ENST00000556432 PRO1933Q9H354 126 aa7.27□□□□□ -1.25
ACTN1-219ENST00000556432 ZNF815PA8K554 130 aa7.26□□□□□ -1.25
ACTN1-219ENST00000556432 EIF4EBP3O60516 100 aaPredicted RBP7.26□□□□□ -1.25
ACTN1-219ENST00000556432 NDUFC2O95298 119 aa7.26□□□□□ -1.25
ACTN1-219ENST00000556432 ADAMTSL4-AS1Q5T5F5 129 aa7.26□□□□□ -1.25
ACTN1-219ENST00000556432 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
ACTN1-219ENST00000556432 DEFB105AQ8NG35 78 aa7.25□□□□□ -1.25
ACTN1-219ENST00000556432 LITAFQ99732 161 aa7.25□□□□□ -1.25
ACTN1-219ENST00000556432 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
ACTN1-219ENST00000556432 DHRS4-AS1Q9P1J3 65 aa7.25□□□□□ -1.25
ACTN1-219ENST00000556432 CBY1Q9Y3M2 126 aa7.25□□□□□ -1.25
ACTN1-219ENST00000556432 TAL2Q16559 108 aa7.24□□□□□ -1.25
ACTN1-219ENST00000556432 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
ACTN1-219ENST00000556432 Q5XG85 94 aa7.23□□□□□ -1.25
ACTN1-219ENST00000556432 SMIM29Q86T20 159 aa7.23□□□□□ -1.25
ACTN1-219ENST00000556432 PCP2Q8IVA1 136 aa7.23□□□□□ -1.25
ACTN1-219ENST00000556432 AKR1D1P51857 326 aa7.22□□□□□ -1.25
ACTN1-219ENST00000556432 ATP11AUNQ6ZP68 121 aa7.22□□□□□ -1.25
ACTN1-219ENST00000556432 OR13C6PQ8NH95 151 aa7.22□□□□□ -1.25
ACTN1-219ENST00000556432 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
ACTN1-219ENST00000556432 TIMM17BO60830 172 aa7.19□□□□□ -1.26
ACTN1-219ENST00000556432 SCGB1D1O95968 90 aa7.19□□□□□ -1.26
ACTN1-219ENST00000556432 LINC00308Q8TCZ7 52 aa7.19□□□□□ -1.26
ACTN1-219ENST00000556432 TEX49A0A1B0GTD5 131 aa7.18□□□□□ -1.26
ACTN1-219ENST00000556432 TCL1BO95988 128 aa7.18□□□□□ -1.26
ACTN1-219ENST00000556432 SCGB1D4Q6XE38 83 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms