RNA–Protein interactions for RNA: ENST00000556417.5

LINC00520-204, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-204ENST00000556417 LEPROTO15243 131 aa5.08□□□□□ -1.6
LINC00520-204ENST00000556417 DPM2O94777 84 aa5.08□□□□□ -1.6
LINC00520-204ENST00000556417 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
LINC00520-204ENST00000556417 HERVK_113P61574 105 aa5.08□□□□□ -1.6
LINC00520-204ENST00000556417 ETDCA0A1B0GVM5 59 aa5.07□□□□□ -1.6
LINC00520-204ENST00000556417 IGKCP01834 107 aa5.07□□□□□ -1.6
LINC00520-204ENST00000556417 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
LINC00520-204ENST00000556417 S100A12P80511 92 aa5.07□□□□□ -1.6
LINC00520-204ENST00000556417 TRBV10-3A0A0K0K1G6 114 aa5.06□□□□□ -1.6
LINC00520-204ENST00000556417 GAGE2AQ6NT46 116 aa5.06□□□□□ -1.6
LINC00520-204ENST00000556417 SPAG11AQ6PDA7 123 aa5.06□□□□□ -1.6
LINC00520-204ENST00000556417 SMCR5Q8TEV8 140 aa5.06□□□□□ -1.6
LINC00520-204ENST00000556417 MIEN1Q9BRT3 115 aa5.06□□□□□ -1.6
LINC00520-204ENST00000556417 KCNQ1DNQ9H478 68 aa5.06□□□□□ -1.6
LINC00520-204ENST00000556417 FP248Q71RG6 208 aaPredicted RBP5.05□□□□□ -1.6
LINC00520-204ENST00000556417 SPRR4Q96PI1 79 aa5.05□□□□□ -1.6
LINC00520-204ENST00000556417 ZNF706Q9Y5V0 76 aaPredicted RBP5.05□□□□□ -1.6
LINC00520-204ENST00000556417 DDTP30046 118 aa5.04□□□□□ -1.6
LINC00520-204ENST00000556417 NMUP48645 174 aa5.04□□□□□ -1.6
LINC00520-204ENST00000556417 NPC2P61916 151 aa5.04□□□□□ -1.6
LINC00520-204ENST00000556417 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
LINC00520-204ENST00000556417 S100A7L2Q5SY68 101 aa5.04□□□□□ -1.6
LINC00520-204ENST00000556417 LINC00337Q8N6G1 96 aa5.04□□□□□ -1.6
LINC00520-204ENST00000556417 SPRR1AP35321 89 aa5.03□□□□□ -1.6
LINC00520-204ENST00000556417 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
LINC00520-204ENST00000556417 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
LINC00520-204ENST00000556417 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
LINC00520-204ENST00000556417 LOC107984156A0A0G2JMH3 177 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 A0A0J9YXY3 114 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 TRBV10-2A0A0K0K1G8 114 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BKO60814 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BJP06899 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BOP23527 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BBP33778 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BDP58876 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BCP62807 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST2H2BEQ16778 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.02□□□□□ -1.61
LINC00520-204ENST00000556417 ARL17AQ8IVW1 177 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BHQ93079 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BNQ99877 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 HIST1H2BMQ99879 126 aa5.02□□□□□ -1.61
LINC00520-204ENST00000556417 SPANXB1Q9NS25 103 aaPredicted RBP5.02□□□□□ -1.61
LINC00520-204ENST00000556417 E9PLD3 99 aa5.01□□□□□ -1.61
LINC00520-204ENST00000556417 KRTAP4-16G5E9R7 235 aaPredicted RBP5.01□□□□□ -1.61
LINC00520-204ENST00000556417 SYS1-DBNDD2H3BUS1 97 aa5.01□□□□□ -1.61
LINC00520-204ENST00000556417 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
LINC00520-204ENST00000556417 Q8NBF4 154 aa5.01□□□□□ -1.61
LINC00520-204ENST00000556417 IGLV9-49A0A0B4J1Y8 123 aa5□□□□□ -1.61
LINC00520-204ENST00000556417 ERC2-IT1O76042 136 aa5□□□□□ -1.61
LINC00520-204ENST00000556417 NDUFC2O95298 119 aa5□□□□□ -1.61
LINC00520-204ENST00000556417 SPINK1P00995 79 aa5□□□□□ -1.61
LINC00520-204ENST00000556417 LINC01547P58512 204 aaPredicted RBP5□□□□□ -1.61
LINC00520-204ENST00000556417 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
LINC00520-204ENST00000556417 TRAV23DV6A0A075B6W5 121 aa4.99□□□□□ -1.61
LINC00520-204ENST00000556417 IGLV6-57P01721 117 aa4.99□□□□□ -1.61
LINC00520-204ENST00000556417 SOSTDC1Q6X4U4 206 aa4.99□□□□□ -1.61
LINC00520-204ENST00000556417 OR13C6PQ8NH95 151 aa4.99□□□□□ -1.61
LINC00520-204ENST00000556417 Q9BRP9 147 aa4.99□□□□□ -1.61
LINC00520-204ENST00000556417 ZNF73O43830 326 aaPredicted RBP4.98□□□□□ -1.61
LINC00520-204ENST00000556417 HINT1P49773 126 aaPredicted RBP4.98□□□□□ -1.61
LINC00520-204ENST00000556417 MOBPQ13875 183 aa4.98□□□□□ -1.61
LINC00520-204ENST00000556417 JOSD1Q15040 202 aaPredicted RBP4.98□□□□□ -1.61
LINC00520-204ENST00000556417 VAMP3Q15836 100 aa4.98□□□□□ -1.61
LINC00520-204ENST00000556417 LINC00483Q53H64 154 aa4.98□□□□□ -1.61
LINC00520-204ENST00000556417 Q6ZRX8 168 aa4.98□□□□□ -1.61
LINC00520-204ENST00000556417 ZNF815PA8K554 130 aa4.97□□□□□ -1.61
LINC00520-204ENST00000556417 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
LINC00520-204ENST00000556417 KRTDAPP60985 99 aa4.97□□□□□ -1.61
LINC00520-204ENST00000556417 LINC01545Q5VT33 79 aa4.97□□□□□ -1.61
LINC00520-204ENST00000556417 LINC00308Q8TCZ7 52 aa4.97□□□□□ -1.61
LINC00520-204ENST00000556417 TTTY13Q9BZ97 58 aa4.97□□□□□ -1.61
LINC00520-204ENST00000556417 C3orf79P0CE67 100 aa4.96□□□□□ -1.62
LINC00520-204ENST00000556417 Q8N377 158 aa4.96□□□□□ -1.62
LINC00520-204ENST00000556417 LOC105371267A0A1B0GV96 52 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 C9orf118A6NHY6 69 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
LINC00520-204ENST00000556417 C9orf153Q5TBE3 101 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 SSBP3-AS1Q7Z2R9 100 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 ST20-AS1Q8NBB2 130 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 LITAFQ99732 161 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 KRTAP4-2Q9BYR5 136 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 SPANXCQ9NY87 97 aa4.95□□□□□ -1.62
LINC00520-204ENST00000556417 TIMM17BO60830 172 aa4.94□□□□□ -1.62
LINC00520-204ENST00000556417 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
LINC00520-204ENST00000556417 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
LINC00520-204ENST00000556417 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
LINC00520-204ENST00000556417 C5orf47Q569G3 176 aa4.93□□□□□ -1.62
LINC00520-204ENST00000556417 ATOH7Q8N100 152 aa4.93□□□□□ -1.62
LINC00520-204ENST00000556417 C20orf202A1L168 122 aa4.92□□□□□ -1.62
LINC00520-204ENST00000556417 SLC25A20O43772 301 aa4.92□□□□□ -1.62
LINC00520-204ENST00000556417 COA6Q5JTJ3 125 aaKnown RBP4.92□□□□□ -1.62
LINC00520-204ENST00000556417 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
LINC00520-204ENST00000556417 Q75L30 129 aa4.92□□□□□ -1.62
LINC00520-204ENST00000556417 LINC00518Q8N0U6 118 aa4.92□□□□□ -1.62
LINC00520-204ENST00000556417 SPANXDQ9BXN6 97 aa4.92□□□□□ -1.62
LINC00520-204ENST00000556417 KRTAP19-2Q3LHN2 52 aa4.91□□□□□ -1.62
LINC00520-204ENST00000556417 DEFB105AQ8NG35 78 aa4.91□□□□□ -1.62
LINC00520-204ENST00000556417 DHRS4-AS1Q9P1J3 65 aa4.91□□□□□ -1.62
LINC00520-204ENST00000556417 PAM16Q9Y3D7 125 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms