RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 GAGE2AQ6NT46 116 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 SSBP3-AS1Q7Z2R9 100 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 BOD1L2Q8IYS8 172 aa5.91□□□□□ -1.46
SYNE2-221ENST00000556342 IGLV9-49A0A0B4J1Y8 123 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
SYNE2-221ENST00000556342 CFC1BP0CG36 223 aa5.89□□□□□ -1.47
SYNE2-221ENST00000556342 FABP9Q0Z7S8 132 aa5.89□□□□□ -1.47
SYNE2-221ENST00000556342 COA6Q5JTJ3 125 aaKnown RBP5.89□□□□□ -1.47
SYNE2-221ENST00000556342 BAGE3Q86Y29 109 aa5.89□□□□□ -1.47
SYNE2-221ENST00000556342 TRBV10-3A0A0K0K1G6 114 aa5.88□□□□□ -1.47
SYNE2-221ENST00000556342 ERC2-IT1O76042 136 aa5.88□□□□□ -1.47
SYNE2-221ENST00000556342 HBDP02042 147 aa5.88□□□□□ -1.47
SYNE2-221ENST00000556342 TRGC2P03986 189 aa5.88□□□□□ -1.47
SYNE2-221ENST00000556342 SMIM13P0DJ93 91 aa5.88□□□□□ -1.47
SYNE2-221ENST00000556342 S100PP25815 95 aa5.88□□□□□ -1.47
SYNE2-221ENST00000556342 COX19Q49B96 90 aa5.88□□□□□ -1.47
SYNE2-221ENST00000556342 SMIM6P0DI80 62 aa5.87□□□□□ -1.47
SYNE2-221ENST00000556342 PMCHL1Q16048 86 aa5.87□□□□□ -1.47
SYNE2-221ENST00000556342 MIR7-3HGQ8N6C7 128 aa5.87□□□□□ -1.47
SYNE2-221ENST00000556342 URB1-AS1Q96HZ7 61 aa5.87□□□□□ -1.47
SYNE2-221ENST00000556342 C12orf57Q99622 126 aa5.87□□□□□ -1.47
SYNE2-221ENST00000556342 TMEM223A0PJW6 202 aa5.86□□□□□ -1.47
SYNE2-221ENST00000556342 LINC00614P0C842 121 aa5.86□□□□□ -1.47
SYNE2-221ENST00000556342 MEIG1Q5JSS6 88 aa5.86□□□□□ -1.47
SYNE2-221ENST00000556342 HIST3H2BBQ8N257 126 aa5.86□□□□□ -1.47
SYNE2-221ENST00000556342 S100A6P06703 90 aa5.85□□□□□ -1.47
SYNE2-221ENST00000556342 AKR1D1P51857 326 aa5.85□□□□□ -1.47
SYNE2-221ENST00000556342 S100A12P80511 92 aa5.85□□□□□ -1.47
SYNE2-221ENST00000556342 PCOTHQ58A44 107 aa5.85□□□□□ -1.47
SYNE2-221ENST00000556342 C18orf32Q8TCD1 76 aa5.85□□□□□ -1.47
SYNE2-221ENST00000556342 Q9BRP9 147 aa5.85□□□□□ -1.47
SYNE2-221ENST00000556342 CHTOPQ9Y3Y2 248 aaKnown RBP5.85□□□□□ -1.47
SYNE2-221ENST00000556342 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
SYNE2-221ENST00000556342 IGLV8-61A0A075B6I0 122 aa5.83□□□□□ -1.48
SYNE2-221ENST00000556342 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
SYNE2-221ENST00000556342 KRTAP10-6P60371 365 aaPredicted RBP5.83□□□□□ -1.48
SYNE2-221ENST00000556342 HERV-K104P63124 156 aa5.83□□□□□ -1.48
SYNE2-221ENST00000556342 C9orf153Q5TBE3 101 aa5.83□□□□□ -1.48
SYNE2-221ENST00000556342 Q6ZRX8 168 aa5.83□□□□□ -1.48
SYNE2-221ENST00000556342 LINC00587B1AMM8 73 aa5.82□□□□□ -1.48
SYNE2-221ENST00000556342 DDTP30046 118 aa5.82□□□□□ -1.48
SYNE2-221ENST00000556342 PYY3Q5JQD4 70 aa5.82□□□□□ -1.48
SYNE2-221ENST00000556342 HIST1H2BLQ99880 126 aa5.81□□□□□ -1.48
SYNE2-221ENST00000556342 MAP1LC3CQ9BXW4 147 aa5.81□□□□□ -1.48
SYNE2-221ENST00000556342 TRAV12-1A0A0B4J245 112 aa5.8□□□□□ -1.48
SYNE2-221ENST00000556342 TRBV10-2A0A0K0K1G8 114 aa5.8□□□□□ -1.48
SYNE2-221ENST00000556342 LOC107984156A0A0G2JMH3 177 aa5.79□□□□□ -1.48
SYNE2-221ENST00000556342 MYMXA0A1B0GTQ4 84 aa5.79□□□□□ -1.48
SYNE2-221ENST00000556342 C9orf92A6NGG3 77 aa5.79□□□□□ -1.48
SYNE2-221ENST00000556342 ARL17AQ8IVW1 177 aa5.79□□□□□ -1.48
SYNE2-221ENST00000556342 TRAPPC1Q9Y5R8 145 aa5.79□□□□□ -1.48
SYNE2-221ENST00000556342 JOSD1Q15040 202 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-221ENST00000556342 ST20-AS1Q8NBB2 130 aa5.78□□□□□ -1.48
SYNE2-221ENST00000556342 IFI27L1Q96BM0 104 aa5.78□□□□□ -1.48
SYNE2-221ENST00000556342 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
SYNE2-221ENST00000556342 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-221ENST00000556342 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
SYNE2-221ENST00000556342 TRAV23DV6A0A075B6W5 121 aa5.76□□□□□ -1.49
SYNE2-221ENST00000556342 M0R2T5 61 aa5.76□□□□□ -1.49
SYNE2-221ENST00000556342 FABP4P15090 132 aa5.76□□□□□ -1.49
SYNE2-221ENST00000556342 S100A2P29034 98 aa5.76□□□□□ -1.49
SYNE2-221ENST00000556342 TSPEAR-AS2P59090 65 aa5.76□□□□□ -1.49
SYNE2-221ENST00000556342 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
SYNE2-221ENST00000556342 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-221ENST00000556342 ZNF73O43830 326 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-221ENST00000556342 NDUFC2O95298 119 aa5.75□□□□□ -1.49
SYNE2-221ENST00000556342 HRCT1Q6UXD1 115 aa5.75□□□□□ -1.49
SYNE2-221ENST00000556342 MIEN1Q9BRT3 115 aa5.75□□□□□ -1.49
SYNE2-221ENST00000556342 PCP4L1A6NKN8 68 aa5.74□□□□□ -1.49
SYNE2-221ENST00000556342 CHCHD1Q96BP2 118 aaKnown RBP5.74□□□□□ -1.49
SYNE2-221ENST00000556342 SPRR1BP22528 89 aa5.73□□□□□ -1.49
SYNE2-221ENST00000556342 LEPROTO15243 131 aa5.72□□□□□ -1.49
SYNE2-221ENST00000556342 SLC25A34Q6PIV7 304 aa5.72□□□□□ -1.49
SYNE2-221ENST00000556342 COX6B2Q6YFQ2 88 aa5.72□□□□□ -1.49
SYNE2-221ENST00000556342 H0Y8G0 127 aa5.71□□□□□ -1.5
SYNE2-221ENST00000556342 SERF1AO75920 110 aa5.71□□□□□ -1.5
SYNE2-221ENST00000556342 SOSTDC1Q6X4U4 206 aa5.71□□□□□ -1.5
SYNE2-221ENST00000556342 J3QQQ9 107 aa5.7□□□□□ -1.5
SYNE2-221ENST00000556342 HINT1P49773 126 aaPredicted RBP5.7□□□□□ -1.5
SYNE2-221ENST00000556342 LAMTOR3Q9UHA4 124 aa5.7□□□□□ -1.5
SYNE2-221ENST00000556342 NMUP48645 174 aa5.69□□□□□ -1.5
SYNE2-221ENST00000556342 RPL37P61927 97 aaKnown RBP5.69□□□□□ -1.5
SYNE2-221ENST00000556342 CD164Q04900 197 aa5.69□□□□□ -1.5
SYNE2-221ENST00000556342 CBY1Q9Y3M2 126 aa5.69□□□□□ -1.5
SYNE2-221ENST00000556342 HSBP1O75506 76 aa5.68□□□□□ -1.5
SYNE2-221ENST00000556342 LGALS3P17931 250 aaKnown RBP5.68□□□□□ -1.5
SYNE2-221ENST00000556342 PLNP26678 52 aa5.68□□□□□ -1.5
SYNE2-221ENST00000556342 NPC2P61916 151 aa5.68□□□□□ -1.5
SYNE2-221ENST00000556342 HERVK_113P61574 105 aa5.67□□□□□ -1.5
SYNE2-221ENST00000556342 Q5XG85 94 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms