RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 HIGD2AQ9BW72 106 aa3.72□□□□□ -1.81
TMEM260-209ENST00000556079 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
TMEM260-209ENST00000556079 IGKV2D-26A0A0A0MRZ7 120 aa3.71□□□□□ -1.82
TMEM260-209ENST00000556079 J3QQQ9 107 aa3.71□□□□□ -1.82
TMEM260-209ENST00000556079 IGKCP01834 107 aa3.71□□□□□ -1.82
TMEM260-209ENST00000556079 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
TMEM260-209ENST00000556079 PPDPFQ9H3Y8 114 aa3.71□□□□□ -1.82
TMEM260-209ENST00000556079 MYMXA0A1B0GTQ4 84 aa3.7□□□□□ -1.82
TMEM260-209ENST00000556079 ERC2-IT1O76042 136 aa3.7□□□□□ -1.82
TMEM260-209ENST00000556079 CRYGAP11844 174 aa3.7□□□□□ -1.82
TMEM260-209ENST00000556079 RPL24P83731 157 aaKnown RBP3.7□□□□□ -1.82
TMEM260-209ENST00000556079 PLEKHB2Q96CS7 222 aa3.7□□□□□ -1.82
TMEM260-209ENST00000556079 HSPB8Q9UJY1 196 aa3.7□□□□□ -1.82
TMEM260-209ENST00000556079 A0A0J9YXY3 114 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 C5orf52A6NGY3 159 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 KRTAP4-16G5E9R7 235 aaPredicted RBP3.69□□□□□ -1.82
TMEM260-209ENST00000556079 SYS1-DBNDD2H3BUS1 97 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 ATP6V1G1O75348 118 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 LGALS3P17931 250 aaKnown RBP3.69□□□□□ -1.82
TMEM260-209ENST00000556079 PLNP26678 52 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 RPL13AP40429 203 aaKnown RBP3.69□□□□□ -1.82
TMEM260-209ENST00000556079 HERV-K104P63124 156 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 SMCR5Q8TEV8 140 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 LITAFQ99732 161 aa3.69□□□□□ -1.82
TMEM260-209ENST00000556079 C3orf79P0CE67 100 aa3.68□□□□□ -1.82
TMEM260-209ENST00000556079 ATOH7Q8N100 152 aa3.68□□□□□ -1.82
TMEM260-209ENST00000556079 MAP1LC3CQ9BXW4 147 aa3.68□□□□□ -1.82
TMEM260-209ENST00000556079 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 E9PLD3 99 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 DDTP30046 118 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 SPRR1AP35321 89 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 KRTDAPP60985 99 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 HERVK_113P61574 105 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 LINC01545Q5VT33 79 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 SFTA2Q6UW10 78 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 Q9BRP9 147 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 KCNQ1DNQ9H478 68 aa3.67□□□□□ -1.82
TMEM260-209ENST00000556079 ETDCA0A1B0GVM5 59 aa3.66□□□□□ -1.82
TMEM260-209ENST00000556079 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
TMEM260-209ENST00000556079 FAM229BQ4G0N7 80 aa3.66□□□□□ -1.82
TMEM260-209ENST00000556079 ST20-AS1Q8NBB2 130 aa3.66□□□□□ -1.82
TMEM260-209ENST00000556079 LOC107984156A0A0G2JMH3 177 aa3.65□□□□□ -1.83
TMEM260-209ENST00000556079 IGLV6-57P01721 117 aa3.65□□□□□ -1.83
TMEM260-209ENST00000556079 GAGE2AQ6NT46 116 aa3.65□□□□□ -1.83
TMEM260-209ENST00000556079 ARL17AQ8IVW1 177 aa3.65□□□□□ -1.83
TMEM260-209ENST00000556079 LINC00337Q8N6G1 96 aa3.65□□□□□ -1.83
TMEM260-209ENST00000556079 Q8NBF4 154 aa3.65□□□□□ -1.83
TMEM260-209ENST00000556079 LINC00308Q8TCZ7 52 aa3.65□□□□□ -1.83
TMEM260-209ENST00000556079 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
TMEM260-209ENST00000556079 A0A0U1RQV1 116 aa3.64□□□□□ -1.83
TMEM260-209ENST00000556079 ZNF815PA8K554 130 aa3.64□□□□□ -1.83
TMEM260-209ENST00000556079 NMUP48645 174 aa3.64□□□□□ -1.83
TMEM260-209ENST00000556079 COA6Q5JTJ3 125 aaKnown RBP3.64□□□□□ -1.83
TMEM260-209ENST00000556079 PCP2Q8IVA1 136 aa3.64□□□□□ -1.83
TMEM260-209ENST00000556079 SPANXB1Q9NS25 103 aaPredicted RBP3.64□□□□□ -1.83
TMEM260-209ENST00000556079 TRAV23DV6A0A075B6W5 121 aa3.63□□□□□ -1.83
TMEM260-209ENST00000556079 MOBPQ13875 183 aa3.63□□□□□ -1.83
TMEM260-209ENST00000556079 S100A7L2Q5SY68 101 aa3.63□□□□□ -1.83
TMEM260-209ENST00000556079 MIEN1Q9BRT3 115 aa3.63□□□□□ -1.83
TMEM260-209ENST00000556079 TRBV10-2A0A0K0K1G8 114 aa3.62□□□□□ -1.83
TMEM260-209ENST00000556079 LINC00483Q53H64 154 aa3.62□□□□□ -1.83
TMEM260-209ENST00000556079 Q6ZRX8 168 aa3.62□□□□□ -1.83
TMEM260-209ENST00000556079 HIST3H2BBQ8N257 126 aa3.62□□□□□ -1.83
TMEM260-209ENST00000556079 OR13C6PQ8NH95 151 aa3.62□□□□□ -1.83
TMEM260-209ENST00000556079 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
TMEM260-209ENST00000556079 A0A0G2JQZ4 141 aa3.61□□□□□ -1.83
TMEM260-209ENST00000556079 LINC00587B1AMM8 73 aa3.61□□□□□ -1.83
TMEM260-209ENST00000556079 ZNF73O43830 326 aaPredicted RBP3.61□□□□□ -1.83
TMEM260-209ENST00000556079 NDUFC2O95298 119 aa3.61□□□□□ -1.83
TMEM260-209ENST00000556079 TIMM17BO60830 172 aa3.6□□□□□ -1.83
TMEM260-209ENST00000556079 HIST1H2BLQ99880 126 aa3.6□□□□□ -1.83
TMEM260-209ENST00000556079 SPANXCQ9NY87 97 aa3.6□□□□□ -1.83
TMEM260-209ENST00000556079 ZNF706Q9Y5V0 76 aaPredicted RBP3.6□□□□□ -1.83
TMEM260-209ENST00000556079 C9orf153Q5TBE3 101 aa3.59□□□□□ -1.83
TMEM260-209ENST00000556079 HRCT1Q6UXD1 115 aa3.59□□□□□ -1.83
TMEM260-209ENST00000556079 MUSTN1Q8IVN3 82 aa3.59□□□□□ -1.83
TMEM260-209ENST00000556079 C6orf99Q4VX62 202 aa3.58□□□□□ -1.84
TMEM260-209ENST00000556079 SCGB1D4Q6XE38 83 aa3.58□□□□□ -1.84
TMEM260-209ENST00000556079 SPANXDQ9BXN6 97 aa3.58□□□□□ -1.84
TMEM260-209ENST00000556079 KRTAP4-1Q9BYQ7 146 aa3.58□□□□□ -1.84
TMEM260-209ENST00000556079 C20orf202A1L168 122 aa3.57□□□□□ -1.84
TMEM260-209ENST00000556079 COX7BP24311 80 aa3.57□□□□□ -1.84
TMEM260-209ENST00000556079 Q1RN00 199 aa3.57□□□□□ -1.84
TMEM260-209ENST00000556079 KRTAP13-3Q3SY46 172 aa3.57□□□□□ -1.84
TMEM260-209ENST00000556079 Q8N377 158 aa3.57□□□□□ -1.84
TMEM260-209ENST00000556079 DEFB105AQ8NG35 78 aa3.57□□□□□ -1.84
TMEM260-209ENST00000556079 LINC01547P58512 204 aaPredicted RBP3.56□□□□□ -1.84
TMEM260-209ENST00000556079 ELOF1P60002 83 aaKnown RBP3.56□□□□□ -1.84
TMEM260-209ENST00000556079 SNRPEP62304 92 aaKnown RBP3.56□□□□□ -1.84
TMEM260-209ENST00000556079 S100A12P80511 92 aa3.56□□□□□ -1.84
TMEM260-209ENST00000556079 TPRXLQ17RH7 258 aa3.56□□□□□ -1.84
TMEM260-209ENST00000556079 C12orf57Q99622 126 aa3.56□□□□□ -1.84
TMEM260-209ENST00000556079 A6NDN8 102 aa3.55□□□□□ -1.84
TMEM260-209ENST00000556079 H7C2G1 150 aa3.55□□□□□ -1.84
TMEM260-209ENST00000556079 UBE2V1Q13404 147 aa3.55□□□□□ -1.84
TMEM260-209ENST00000556079 LINC00518Q8N0U6 118 aa3.55□□□□□ -1.84
TMEM260-209ENST00000556079 SMIM11BQ8TCY0 68 aa3.55□□□□□ -1.84
TMEM260-209ENST00000556079 SPRR1BP22528 89 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms