RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 SVBPQ8N300 66 aa9.34□□□□□ -0.91
XRCC3-215ENST00000555964 J3QQQ9 107 aa9.33□□□□□ -0.92
XRCC3-215ENST00000555964 ZNF73O43830 326 aaPredicted RBP9.32□□□□□ -0.92
XRCC3-215ENST00000555964 APOC3P02656 99 aa9.32□□□□□ -0.92
XRCC3-215ENST00000555964 CFC1BP0CG36 223 aa9.32□□□□□ -0.92
XRCC3-215ENST00000555964 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
XRCC3-215ENST00000555964 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
XRCC3-215ENST00000555964 LEPROTL1O95214 131 aa9.3□□□□□ -0.92
XRCC3-215ENST00000555964 DPM2O94777 84 aa9.28□□□□□ -0.92
XRCC3-215ENST00000555964 HSPB8Q9UJY1 196 aa9.28□□□□□ -0.92
XRCC3-215ENST00000555964 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
XRCC3-215ENST00000555964 ST20-AS1Q8NBB2 130 aa9.27□□□□□ -0.93
XRCC3-215ENST00000555964 IGLV8-61A0A075B6I0 122 aa9.26□□□□□ -0.93
XRCC3-215ENST00000555964 PCOTHQ58A44 107 aa9.26□□□□□ -0.93
XRCC3-215ENST00000555964 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
XRCC3-215ENST00000555964 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
XRCC3-215ENST00000555964 SPRR1BP22528 89 aa9.25□□□□□ -0.93
XRCC3-215ENST00000555964 IGKCP01834 107 aa9.24□□□□□ -0.93
XRCC3-215ENST00000555964 MT1HP80294 61 aa9.23□□□□□ -0.93
XRCC3-215ENST00000555964 YPEL4Q96NS1 127 aa9.23□□□□□ -0.93
XRCC3-215ENST00000555964 C9orf92A6NGG3 77 aa9.22□□□□□ -0.93
XRCC3-215ENST00000555964 NPC2P61916 151 aa9.22□□□□□ -0.93
XRCC3-215ENST00000555964 KRTAP19-2Q3LHN2 52 aa9.22□□□□□ -0.93
XRCC3-215ENST00000555964 HRCT1Q6UXD1 115 aa9.22□□□□□ -0.93
XRCC3-215ENST00000555964 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.93
XRCC3-215ENST00000555964 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
XRCC3-215ENST00000555964 CD164Q04900 197 aa9.21□□□□□ -0.94
XRCC3-215ENST00000555964 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
XRCC3-215ENST00000555964 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
XRCC3-215ENST00000555964 SERF1AO75920 110 aa9.2□□□□□ -0.94
XRCC3-215ENST00000555964 OR13C6PQ8NH95 151 aa9.2□□□□□ -0.94
XRCC3-215ENST00000555964 E9PLD3 99 aa9.18□□□□□ -0.94
XRCC3-215ENST00000555964 ADAMTSL4-AS1Q5T5F5 129 aa9.18□□□□□ -0.94
XRCC3-215ENST00000555964 PMCHL2Q9BQD1 86 aa9.18□□□□□ -0.94
XRCC3-215ENST00000555964 FABP4P15090 132 aa9.17□□□□□ -0.94
XRCC3-215ENST00000555964 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
XRCC3-215ENST00000555964 PRO1933Q9H354 126 aa9.17□□□□□ -0.94
XRCC3-215ENST00000555964 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
XRCC3-215ENST00000555964 TRGC2P03986 189 aa9.16□□□□□ -0.94
XRCC3-215ENST00000555964 H7C2G1 150 aa9.15□□□□□ -0.94
XRCC3-215ENST00000555964 TAL2Q16559 108 aa9.15□□□□□ -0.94
XRCC3-215ENST00000555964 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.94
XRCC3-215ENST00000555964 TIMM17BO60830 172 aa9.14□□□□□ -0.95
XRCC3-215ENST00000555964 COX7BP24311 80 aa9.14□□□□□ -0.95
XRCC3-215ENST00000555964 LINC00310P59036 64 aa9.14□□□□□ -0.95
XRCC3-215ENST00000555964 ELOF1P60002 83 aaKnown RBP9.14□□□□□ -0.95
XRCC3-215ENST00000555964 Q5XG85 94 aa9.14□□□□□ -0.95
XRCC3-215ENST00000555964 TEX49A0A1B0GTD5 131 aa9.13□□□□□ -0.95
XRCC3-215ENST00000555964 M0R2T5 61 aa9.13□□□□□ -0.95
XRCC3-215ENST00000555964 LINC00518Q8N0U6 118 aa9.13□□□□□ -0.95
XRCC3-215ENST00000555964 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
XRCC3-215ENST00000555964 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
XRCC3-215ENST00000555964 Q1RN00 199 aa9.12□□□□□ -0.95
XRCC3-215ENST00000555964 AKR1D1P51857 326 aa9.11□□□□□ -0.95
XRCC3-215ENST00000555964 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
XRCC3-215ENST00000555964 C6orf99Q4VX62 202 aa9.1□□□□□ -0.95
XRCC3-215ENST00000555964 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
XRCC3-215ENST00000555964 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
XRCC3-215ENST00000555964 LITAFQ99732 161 aa9.09□□□□□ -0.95
XRCC3-215ENST00000555964 TRBV7-6A0A0J9YX20 115 aa9.08□□□□□ -0.96
XRCC3-215ENST00000555964 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
XRCC3-215ENST00000555964 COPS9Q8WXC6 57 aa9.07□□□□□ -0.96
XRCC3-215ENST00000555964 A0A1B0GWB2 263 aa9.06□□□□□ -0.96
XRCC3-215ENST00000555964 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
XRCC3-215ENST00000555964 SYS1-DBNDD2H3BUS1 97 aa9.04□□□□□ -0.96
XRCC3-215ENST00000555964 TCL1BO95988 128 aa9.04□□□□□ -0.96
XRCC3-215ENST00000555964 IGLV5-48A0A075B6I7 105 aa9.02□□□□□ -0.97
XRCC3-215ENST00000555964 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
XRCC3-215ENST00000555964 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.97
XRCC3-215ENST00000555964 A4D1N5 150 aa9.01□□□□□ -0.97
XRCC3-215ENST00000555964 LINC01545Q5VT33 79 aa9□□□□□ -0.97
XRCC3-215ENST00000555964 PET117Q6UWS5 81 aa8.99□□□□□ -0.97
XRCC3-215ENST00000555964 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
XRCC3-215ENST00000555964 A6NDN8 102 aa8.97□□□□□ -0.97
XRCC3-215ENST00000555964 F8WEM9 126 aa8.97□□□□□ -0.97
XRCC3-215ENST00000555964 IFITM1P13164 125 aa8.97□□□□□ -0.97
XRCC3-215ENST00000555964 Q6ZVH6 145 aa8.95□□□□□ -0.98
XRCC3-215ENST00000555964 FLGP20930 4061 aaPredicted RBP8.94□□□□□ -0.98
XRCC3-215ENST00000555964 COLCA2A8K830 154 aa8.94□□□□□ -0.98
XRCC3-215ENST00000555964 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
XRCC3-215ENST00000555964 A0A0G2JQZ4 141 aa8.93□□□□□ -0.98
XRCC3-215ENST00000555964 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
XRCC3-215ENST00000555964 Q6JHZ5 121 aa8.9□□□□□ -0.98
XRCC3-215ENST00000555964 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
XRCC3-215ENST00000555964 VAMP3Q15836 100 aa8.89□□□□□ -0.99
XRCC3-215ENST00000555964 PCP2Q8IVA1 136 aa8.89□□□□□ -0.99
XRCC3-215ENST00000555964 C20orf202A1L168 122 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BKO60814 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BJP06899 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BOP23527 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BBP33778 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BDP58876 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BCP62807 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST2H2BEQ16778 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.88□□□□□ -0.99
XRCC3-215ENST00000555964 Q6Q795 121 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BHQ93079 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BNQ99877 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 HIST1H2BMQ99879 126 aa8.88□□□□□ -0.99
XRCC3-215ENST00000555964 C3orf79P0CE67 100 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms