RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 Q6ZRP5 223 aa10.64□□□□□ -0.71
TUBB3-209ENST00000555609 RETNQ9HD89 108 aa10.64□□□□□ -0.71
TUBB3-209ENST00000555609 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
TUBB3-209ENST00000555609 IGKV2D-24A0A075B6R9 120 aa10.62□□□□□ -0.71
TUBB3-209ENST00000555609 DEFB131BA0A096LNP1 70 aa10.62□□□□□ -0.71
TUBB3-209ENST00000555609 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
TUBB3-209ENST00000555609 A0A1B0GW54 56 aa10.61□□□□□ -0.71
TUBB3-209ENST00000555609 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
TUBB3-209ENST00000555609 NKAPP1Q8N9T2 125 aa10.61□□□□□ -0.71
TUBB3-209ENST00000555609 C11orf45Q8TAV5 145 aa10.6□□□□□ -0.71
TUBB3-209ENST00000555609 C20orf197Q8N268 126 aa10.59□□□□□ -0.71
TUBB3-209ENST00000555609 VWFP04275 2813 aa10.59□□□□□ -0.71
TUBB3-209ENST00000555609 IGLV5-37A0A075B6J1 123 aa10.59□□□□□ -0.71
TUBB3-209ENST00000555609 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
TUBB3-209ENST00000555609 DHRS4-AS1Q9P1J3 65 aa10.59□□□□□ -0.71
TUBB3-209ENST00000555609 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
TUBB3-209ENST00000555609 PRYO14603 147 aa10.56□□□□□ -0.72
TUBB3-209ENST00000555609 C7orf33Q8WU49 177 aa10.56□□□□□ -0.72
TUBB3-209ENST00000555609 PKD1L1Q8TDX9 2849 aa10.55□□□□□ -0.72
TUBB3-209ENST00000555609 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
TUBB3-209ENST00000555609 NDUFC1O43677 76 aa10.55□□□□□ -0.72
TUBB3-209ENST00000555609 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
TUBB3-209ENST00000555609 ERC2-IT1O76042 136 aa10.54□□□□□ -0.72
TUBB3-209ENST00000555609 RMI2Q96E14 147 aa10.54□□□□□ -0.72
TUBB3-209ENST00000555609 NREPQ16612 68 aa10.53□□□□□ -0.72
TUBB3-209ENST00000555609 FAM236DA0A1B0GTK5 79 aa10.53□□□□□ -0.72
TUBB3-209ENST00000555609 FAM236CP0DP71 79 aa10.53□□□□□ -0.72
TUBB3-209ENST00000555609 SERTAD4-AS1Q5TG53 156 aa10.52□□□□□ -0.73
TUBB3-209ENST00000555609 Q8N377 158 aa10.52□□□□□ -0.73
TUBB3-209ENST00000555609 H7BZZ5 65 aa10.51□□□□□ -0.73
TUBB3-209ENST00000555609 SPRR1AP35321 89 aa10.51□□□□□ -0.73
TUBB3-209ENST00000555609 Q6ZRX8 168 aa10.51□□□□□ -0.73
TUBB3-209ENST00000555609 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
TUBB3-209ENST00000555609 IGLV1-50A0A075B6I6 118 aa10.49□□□□□ -0.73
TUBB3-209ENST00000555609 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
TUBB3-209ENST00000555609 SERP1Q9Y6X1 66 aa10.49□□□□□ -0.73
TUBB3-209ENST00000555609 BPY2O14599 106 aa10.48□□□□□ -0.73
TUBB3-209ENST00000555609 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.73
TUBB3-209ENST00000555609 SCXQ7RTU7 201 aa10.48□□□□□ -0.73
TUBB3-209ENST00000555609 ETDCA0A1B0GVM5 59 aa10.47□□□□□ -0.73
TUBB3-209ENST00000555609 EPM2AB3EWF7 344 aa10.47□□□□□ -0.73
TUBB3-209ENST00000555609 IGKV4-1P06312 121 aa10.47□□□□□ -0.73
TUBB3-209ENST00000555609 ATP5EP56381 51 aaPredicted RBP10.47□□□□□ -0.73
TUBB3-209ENST00000555609 Q5XG85 94 aa10.47□□□□□ -0.73
TUBB3-209ENST00000555609 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
TUBB3-209ENST00000555609 LINC00588Q9Y4M8 146 aa10.46□□□□□ -0.74
TUBB3-209ENST00000555609 OXTP01178 125 aa10.45□□□□□ -0.74
TUBB3-209ENST00000555609 TNP2Q05952 138 aa10.44□□□□□ -0.74
TUBB3-209ENST00000555609 DEFB105AQ8NG35 78 aa10.44□□□□□ -0.74
TUBB3-209ENST00000555609 TM2D3Q9BRN9 247 aa10.44□□□□□ -0.74
TUBB3-209ENST00000555609 Q9BRP9 147 aa10.43□□□□□ -0.74
TUBB3-209ENST00000555609 PRO0628Q9UI54 55 aa10.43□□□□□ -0.74
TUBB3-209ENST00000555609 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
TUBB3-209ENST00000555609 MRPL55Q7Z7F7 128 aaKnown RBP10.41□□□□□ -0.74
TUBB3-209ENST00000555609 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
TUBB3-209ENST00000555609 C1orf137Q5JT78 98 aa10.4□□□□□ -0.74
TUBB3-209ENST00000555609 Q8NBF4 154 aa10.4□□□□□ -0.74
TUBB3-209ENST00000555609 SNURFQ9Y675 71 aa10.4□□□□□ -0.74
TUBB3-209ENST00000555609 RPL37AP8A6NKH3 93 aa10.4□□□□□ -0.75
TUBB3-209ENST00000555609 F8WEM9 126 aa10.4□□□□□ -0.75
TUBB3-209ENST00000555609 C3orf84H3BNL1 204 aa10.4□□□□□ -0.75
TUBB3-209ENST00000555609 TMEM254Q8TBM7 123 aa10.4□□□□□ -0.75
TUBB3-209ENST00000555609 OCR1Q9BZK8 76 aa10.4□□□□□ -0.75
TUBB3-209ENST00000555609 A0A1W2PNM2 257 aa10.38□□□□□ -0.75
TUBB3-209ENST00000555609 FAM168BA1KXE4 195 aa10.38□□□□□ -0.75
TUBB3-209ENST00000555609 C4orf26Q17RF5 130 aa10.38□□□□□ -0.75
TUBB3-209ENST00000555609 HRCT1Q6UXD1 115 aa10.38□□□□□ -0.75
TUBB3-209ENST00000555609 KRTAP7-1Q8IUC3 87 aa10.37□□□□□ -0.75
TUBB3-209ENST00000555609 SMIM26A0A096LP01 95 aa10.36□□□□□ -0.75
TUBB3-209ENST00000555609 CASC10Q5T4H9 136 aa10.36□□□□□ -0.75
TUBB3-209ENST00000555609 REG3GQ6UW15 175 aa10.36□□□□□ -0.75
TUBB3-209ENST00000555609 Q8N9L7 120 aa10.35□□□□□ -0.75
TUBB3-209ENST00000555609 A0A0U1RQV1 116 aa10.34□□□□□ -0.75
TUBB3-209ENST00000555609 UBE2BP63146 152 aa10.34□□□□□ -0.75
TUBB3-209ENST00000555609 ST20-AS1Q8NBB2 130 aa10.33□□□□□ -0.76
TUBB3-209ENST00000555609 FBN3Q75N90 2809 aa10.32□□□□□ -0.76
TUBB3-209ENST00000555609 CNBPP62633 177 aaKnown RBP10.3□□□□□ -0.76
TUBB3-209ENST00000555609 DNAH3Q8TD57 4116 aa10.29□□□□□ -0.76
TUBB3-209ENST00000555609 LCE6AA0A183 80 aa10.29□□□□□ -0.76
TUBB3-209ENST00000555609 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
TUBB3-209ENST00000555609 SMIM29Q86T20 159 aa10.29□□□□□ -0.76
TUBB3-209ENST00000555609 MEGF8Q7Z7M0 2845 aa10.29□□□□□ -0.76
TUBB3-209ENST00000555609 IGLV8-61A0A075B6I0 122 aa10.28□□□□□ -0.76
TUBB3-209ENST00000555609 PRB2P02812 416 aaPredicted RBP10.26□□□□□ -0.77
TUBB3-209ENST00000555609 DSCR10P59022 87 aa10.25□□□□□ -0.77
TUBB3-209ENST00000555609 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
TUBB3-209ENST00000555609 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
TUBB3-209ENST00000555609 K7EIL1 84 aa10.23□□□□□ -0.77
TUBB3-209ENST00000555609 PKIGQ9Y2B9 76 aa10.23□□□□□ -0.77
TUBB3-209ENST00000555609 DNAH1Q9P2D7 4330 aa10.23□□□□□ -0.77
TUBB3-209ENST00000555609 A0A096LNI7 61 aa10.21□□□□□ -0.78
TUBB3-209ENST00000555609 H0Y9J4 135 aa10.21□□□□□ -0.78
TUBB3-209ENST00000555609 PRKDCP78527 4128 aaKnown RBP10.21□□□□□ -0.78
TUBB3-209ENST00000555609 IGFL1Q6UW32 110 aa10.2□□□□□ -0.78
TUBB3-209ENST00000555609 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
TUBB3-209ENST00000555609 HIGD2AQ9BW72 106 aa10.19□□□□□ -0.78
TUBB3-209ENST00000555609 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
TUBB3-209ENST00000555609 LINC00336Q6ZUF6 198 aa10.19□□□□□ -0.78
TUBB3-209ENST00000555609 A0A1W2PNN7 141 aa10.18□□□□□ -0.78
TUBB3-209ENST00000555609 HCG22E2RYF7 251 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms