RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 C5orf38Q86SI9 138 aa7.51□□□□□ -1.21
VPS33B-204ENST00000554660 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
VPS33B-204ENST00000554660 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
VPS33B-204ENST00000554660 H3BQ85 93 aa7.5□□□□□ -1.21
VPS33B-204ENST00000554660 KIAA0087Q14695 138 aa7.5□□□□□ -1.21
VPS33B-204ENST00000554660 Q6ZSA8 131 aa7.5□□□□□ -1.21
VPS33B-204ENST00000554660 IGKV3OR2-268A0A0C4DH90 116 aa7.49□□□□□ -1.21
VPS33B-204ENST00000554660 LINC01556Q5JQF7 62 aa7.49□□□□□ -1.21
VPS33B-204ENST00000554660 CFAP161Q6P656 301 aa7.49□□□□□ -1.21
VPS33B-204ENST00000554660 TMEM126AQ9H061 195 aa7.49□□□□□ -1.21
VPS33B-204ENST00000554660 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
VPS33B-204ENST00000554660 XCL1P47992 114 aa7.48□□□□□ -1.21
VPS33B-204ENST00000554660 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
VPS33B-204ENST00000554660 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
VPS33B-204ENST00000554660 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.47□□□□□ -1.21
VPS33B-204ENST00000554660 LECT2O14960 151 aa7.47□□□□□ -1.21
VPS33B-204ENST00000554660 PFN2P35080 140 aa7.47□□□□□ -1.21
VPS33B-204ENST00000554660 LELP1Q5T871 98 aa7.47□□□□□ -1.21
VPS33B-204ENST00000554660 SCXQ7RTU7 201 aa7.47□□□□□ -1.21
VPS33B-204ENST00000554660 CHCHD10Q8WYQ3 142 aaPredicted RBP7.47□□□□□ -1.21
VPS33B-204ENST00000554660 A0A087WYN8 130 aa7.46□□□□□ -1.22
VPS33B-204ENST00000554660 GVQW2A0A096LPI5 108 aaPredicted RBP7.46□□□□□ -1.22
VPS33B-204ENST00000554660 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.22
VPS33B-204ENST00000554660 REG3AQ06141 175 aa7.46□□□□□ -1.22
VPS33B-204ENST00000554660 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
VPS33B-204ENST00000554660 Q6JHZ5 121 aa7.46□□□□□ -1.22
VPS33B-204ENST00000554660 Q8N3U1 123 aa7.46□□□□□ -1.22
VPS33B-204ENST00000554660 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.22
VPS33B-204ENST00000554660 TMEM256-PLSCR3K7ERE1 68 aa7.45□□□□□ -1.22
VPS33B-204ENST00000554660 ATP5EP2Q5VTU8 51 aa7.45□□□□□ -1.22
VPS33B-204ENST00000554660 OR13C6PQ8NH95 151 aa7.45□□□□□ -1.22
VPS33B-204ENST00000554660 SMCR5Q8TEV8 140 aa7.45□□□□□ -1.22
VPS33B-204ENST00000554660 PRR34Q9NV39 138 aa7.45□□□□□ -1.22
VPS33B-204ENST00000554660 HIST1H4AP62805 103 aaKnown RBP7.44□□□□□ -1.22
VPS33B-204ENST00000554660 GAGE2AQ6NT46 116 aa7.44□□□□□ -1.22
VPS33B-204ENST00000554660 LINC00269Q8N2A0 174 aa7.44□□□□□ -1.22
VPS33B-204ENST00000554660 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
VPS33B-204ENST00000554660 ANGP03950 147 aaKnown RBP7.42□□□□□ -1.22
VPS33B-204ENST00000554660 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 F8WDY8 70 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 ATOX1O00244 68 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 UQCRQO14949 82 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 OXTP01178 125 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 GHRHP01286 108 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 CCKP06307 115 aa7.41□□□□□ -1.22
VPS33B-204ENST00000554660 B5MCH6 92 aa7.4□□□□□ -1.22
VPS33B-204ENST00000554660 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
VPS33B-204ENST00000554660 SPAG11BQ08648 103 aa7.4□□□□□ -1.22
VPS33B-204ENST00000554660 CIRBP-AS1Q8TBR5 109 aa7.4□□□□□ -1.22
VPS33B-204ENST00000554660 TRBV7-6A0A0J9YX20 115 aa7.39□□□□□ -1.23
VPS33B-204ENST00000554660 TRBV10-3A0A0K0K1G6 114 aa7.39□□□□□ -1.23
VPS33B-204ENST00000554660 C14orf132Q9NPU4 83 aa7.39□□□□□ -1.23
VPS33B-204ENST00000554660 IGLV6-57P01721 117 aa7.38□□□□□ -1.23
VPS33B-204ENST00000554660 PDE6GP18545 87 aa7.38□□□□□ -1.23
VPS33B-204ENST00000554660 CLPSL2Q6UWE3 100 aa7.38□□□□□ -1.23
VPS33B-204ENST00000554660 LINC00575Q6W349 94 aa7.38□□□□□ -1.23
VPS33B-204ENST00000554660 C3orf22Q8N5N4 141 aa7.38□□□□□ -1.23
VPS33B-204ENST00000554660 LINC00526Q96FQ7 95 aa7.37□□□□□ -1.23
VPS33B-204ENST00000554660 LOC110117498A0A087WWA1 95 aa7.36□□□□□ -1.23
VPS33B-204ENST00000554660 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
VPS33B-204ENST00000554660 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
VPS33B-204ENST00000554660 BCE1O60756 84 aa7.35□□□□□ -1.23
VPS33B-204ENST00000554660 COX7CP15954 63 aa7.35□□□□□ -1.23
VPS33B-204ENST00000554660 RPL18AQ02543 176 aaKnown RBP7.35□□□□□ -1.23
VPS33B-204ENST00000554660 C6orf99Q4VX62 202 aa7.35□□□□□ -1.23
VPS33B-204ENST00000554660 LRP2P98164 4655 aa7.34□□□□□ -1.23
VPS33B-204ENST00000554660 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
VPS33B-204ENST00000554660 hADV29S1A0JD25 119 aa7.34□□□□□ -1.23
VPS33B-204ENST00000554660 NCR3O14931 201 aa7.34□□□□□ -1.23
VPS33B-204ENST00000554660 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
VPS33B-204ENST00000554660 C9orf129Q5T035 196 aaKnown RBP7.34□□□□□ -1.23
VPS33B-204ENST00000554660 C2orf48Q96LS8 159 aa7.34□□□□□ -1.23
VPS33B-204ENST00000554660 IGLV10-54A0A075B6I4 117 aa7.33□□□□□ -1.24
VPS33B-204ENST00000554660 CRYGAP11844 174 aa7.33□□□□□ -1.24
VPS33B-204ENST00000554660 ENHOQ6UWT2 76 aa7.33□□□□□ -1.24
VPS33B-204ENST00000554660 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
VPS33B-204ENST00000554660 SS18L2Q9UHA2 77 aa7.33□□□□□ -1.24
VPS33B-204ENST00000554660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
VPS33B-204ENST00000554660 RMI2Q96E14 147 aa7.32□□□□□ -1.24
VPS33B-204ENST00000554660 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
VPS33B-204ENST00000554660 SLPIP03973 132 aa7.31□□□□□ -1.24
VPS33B-204ENST00000554660 MT1HL1P0DM35 61 aa7.31□□□□□ -1.24
VPS33B-204ENST00000554660 C9orf153Q5TBE3 101 aa7.31□□□□□ -1.24
VPS33B-204ENST00000554660 DIRC1Q969H9 104 aa7.31□□□□□ -1.24
VPS33B-204ENST00000554660 UBL5Q9BZL1 73 aa7.31□□□□□ -1.24
VPS33B-204ENST00000554660 RBM3P98179 157 aaKnown RBP7.3□□□□□ -1.24
VPS33B-204ENST00000554660 C9orf116Q5BN46 136 aaPredicted RBP7.3□□□□□ -1.24
VPS33B-204ENST00000554660 C10orf25Q5T742 122 aa7.3□□□□□ -1.24
VPS33B-204ENST00000554660 Q6ZQT0 140 aa7.3□□□□□ -1.24
VPS33B-204ENST00000554660 SERP2Q8N6R1 65 aa7.3□□□□□ -1.24
VPS33B-204ENST00000554660 Q8NDZ9 215 aa7.3□□□□□ -1.24
VPS33B-204ENST00000554660 C6orf48Q9UBA6 75 aa7.3□□□□□ -1.24
VPS33B-204ENST00000554660 TNXBP22105 4242 aa7.3□□□□□ -1.24
VPS33B-204ENST00000554660 TRAV23DV6A0A075B6W5 121 aa7.29□□□□□ -1.24
VPS33B-204ENST00000554660 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
VPS33B-204ENST00000554660 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
VPS33B-204ENST00000554660 M0R378 163 aa7.28□□□□□ -1.24
VPS33B-204ENST00000554660 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
VPS33B-204ENST00000554660 SVIPQ8NHG7 77 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms