RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 IGLV6-57P01721 117 aa9.68□□□□□ -0.86
PPP4R3A-201ENST00000554308 LOC110117498A0A087WWA1 95 aa9.67□□□□□ -0.86
PPP4R3A-201ENST00000554308 TRBV10-3A0A0K0K1G6 114 aa9.67□□□□□ -0.86
PPP4R3A-201ENST00000554308 CAMK2N2Q96S95 79 aa9.67□□□□□ -0.86
PPP4R3A-201ENST00000554308 C6orf48Q9UBA6 75 aa9.67□□□□□ -0.86
PPP4R3A-201ENST00000554308 SCXQ7RTU7 201 aa9.67□□□□□ -0.86
PPP4R3A-201ENST00000554308 Q5XG85 94 aa9.66□□□□□ -0.86
PPP4R3A-201ENST00000554308 C15orf56Q8N910 161 aa9.66□□□□□ -0.86
PPP4R3A-201ENST00000554308 PRKDCP78527 4128 aaKnown RBP9.66□□□□□ -0.86
PPP4R3A-201ENST00000554308 B9D2Q9BPU9 175 aa9.66□□□□□ -0.86
PPP4R3A-201ENST00000554308 DNAH7Q8WXX0 4024 aa9.65□□□□□ -0.86
PPP4R3A-201ENST00000554308 HRCT1Q6UXD1 115 aa9.64□□□□□ -0.87
PPP4R3A-201ENST00000554308 SNURFQ9Y675 71 aa9.64□□□□□ -0.87
PPP4R3A-201ENST00000554308 Q6ZRU5 148 aa9.64□□□□□ -0.87
PPP4R3A-201ENST00000554308 H7BZZ5 65 aa9.62□□□□□ -0.87
PPP4R3A-201ENST00000554308 MUC7Q8TAX7 377 aa9.62□□□□□ -0.87
PPP4R3A-201ENST00000554308 DNAH10Q8IVF4 4471 aa9.62□□□□□ -0.87
PPP4R3A-201ENST00000554308 TRAV7A0A075B6U4 112 aa9.61□□□□□ -0.87
PPP4R3A-201ENST00000554308 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
PPP4R3A-201ENST00000554308 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
PPP4R3A-201ENST00000554308 CASC10Q5T4H9 136 aa9.61□□□□□ -0.87
PPP4R3A-201ENST00000554308 RMI2Q96E14 147 aa9.61□□□□□ -0.87
PPP4R3A-201ENST00000554308 GVQW2A0A096LPI5 108 aaPredicted RBP9.6□□□□□ -0.87
PPP4R3A-201ENST00000554308 NDUFC2-KCTD14E9PQ53 114 aa9.6□□□□□ -0.87
PPP4R3A-201ENST00000554308 DIRC1Q969H9 104 aa9.6□□□□□ -0.87
PPP4R3A-201ENST00000554308 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
PPP4R3A-201ENST00000554308 ZNF73O43830 326 aaPredicted RBP9.59□□□□□ -0.87
PPP4R3A-201ENST00000554308 DNAH1Q9P2D7 4330 aa9.59□□□□□ -0.87
PPP4R3A-201ENST00000554308 COX7BP24311 80 aa9.57□□□□□ -0.88
PPP4R3A-201ENST00000554308 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
PPP4R3A-201ENST00000554308 TRBV7-4A0A0J9YYF1 115 aa9.56□□□□□ -0.88
PPP4R3A-201ENST00000554308 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
PPP4R3A-201ENST00000554308 CXCL6P80162 114 aa9.56□□□□□ -0.88
PPP4R3A-201ENST00000554308 Q8N9L7 120 aa9.56□□□□□ -0.88
PPP4R3A-201ENST00000554308 TGP01266 2768 aa9.55□□□□□ -0.88
PPP4R3A-201ENST00000554308 Q6ZRP5 223 aa9.55□□□□□ -0.88
PPP4R3A-201ENST00000554308 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
PPP4R3A-201ENST00000554308 APLNQ9ULZ1 77 aa9.55□□□□□ -0.88
PPP4R3A-201ENST00000554308 F8WEM9 126 aa9.54□□□□□ -0.88
PPP4R3A-201ENST00000554308 ELOF1P60002 83 aaKnown RBP9.54□□□□□ -0.88
PPP4R3A-201ENST00000554308 KLKP1Q107X0 134 aa9.54□□□□□ -0.88
PPP4R3A-201ENST00000554308 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
PPP4R3A-201ENST00000554308 PDE6GP18545 87 aa9.53□□□□□ -0.88
PPP4R3A-201ENST00000554308 VPREB1P12018 145 aa9.53□□□□□ -0.88
PPP4R3A-201ENST00000554308 STARD9Q9P2P6 4700 aa9.52□□□□□ -0.88
PPP4R3A-201ENST00000554308 BCE1O60756 84 aa9.52□□□□□ -0.89
PPP4R3A-201ENST00000554308 EPM2AB3EWF7 344 aa9.51□□□□□ -0.89
PPP4R3A-201ENST00000554308 SERP1Q9Y6X1 66 aa9.51□□□□□ -0.89
PPP4R3A-201ENST00000554308 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
PPP4R3A-201ENST00000554308 FBN3Q75N90 2809 aa9.49□□□□□ -0.89
PPP4R3A-201ENST00000554308 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
PPP4R3A-201ENST00000554308 PSCAO43653 123 aa9.48□□□□□ -0.89
PPP4R3A-201ENST00000554308 LINC00528Q8N1L1 170 aa9.48□□□□□ -0.89
PPP4R3A-201ENST00000554308 BPY2O14599 106 aa9.47□□□□□ -0.89
PPP4R3A-201ENST00000554308 NREPQ16612 68 aa9.47□□□□□ -0.89
PPP4R3A-201ENST00000554308 H3BQ85 93 aa9.47□□□□□ -0.89
PPP4R3A-201ENST00000554308 NUPR2A6NF83 97 aa9.46□□□□□ -0.89
PPP4R3A-201ENST00000554308 M0R378 163 aa9.46□□□□□ -0.89
PPP4R3A-201ENST00000554308 F8WDY8 70 aa9.46□□□□□ -0.9
PPP4R3A-201ENST00000554308 C3orf84H3BNL1 204 aa9.46□□□□□ -0.9
PPP4R3A-201ENST00000554308 FP248Q71RG6 208 aaPredicted RBP9.45□□□□□ -0.9
PPP4R3A-201ENST00000554308 DEFB105AQ8NG35 78 aa9.45□□□□□ -0.9
PPP4R3A-201ENST00000554308 IGKV4-1P06312 121 aa9.44□□□□□ -0.9
PPP4R3A-201ENST00000554308 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
PPP4R3A-201ENST00000554308 SERTAD4-AS1Q5TG53 156 aa9.44□□□□□ -0.9
PPP4R3A-201ENST00000554308 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
PPP4R3A-201ENST00000554308 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
PPP4R3A-201ENST00000554308 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
PPP4R3A-201ENST00000554308 LINC00336Q6ZUF6 198 aa9.42□□□□□ -0.9
PPP4R3A-201ENST00000554308 NKAPP1Q8N9T2 125 aa9.42□□□□□ -0.9
PPP4R3A-201ENST00000554308 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
PPP4R3A-201ENST00000554308 KMT2AQ03164 3969 aa9.39□□□□□ -0.91
PPP4R3A-201ENST00000554308 NBDYA0A0U1RRE5 68 aa9.39□□□□□ -0.91
PPP4R3A-201ENST00000554308 RPL37AP8A6NKH3 93 aa9.39□□□□□ -0.91
PPP4R3A-201ENST00000554308 Q8N377 158 aa9.38□□□□□ -0.91
PPP4R3A-201ENST00000554308 OCR1Q9BZK8 76 aa9.38□□□□□ -0.91
PPP4R3A-201ENST00000554308 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
PPP4R3A-201ENST00000554308 FAM229BQ4G0N7 80 aa9.37□□□□□ -0.91
PPP4R3A-201ENST00000554308 C7orf33Q8WU49 177 aa9.37□□□□□ -0.91
PPP4R3A-201ENST00000554308 IGKV2-24A0A0C4DH68 120 aa9.36□□□□□ -0.91
PPP4R3A-201ENST00000554308 NDUFC1O43677 76 aa9.36□□□□□ -0.91
PPP4R3A-201ENST00000554308 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
PPP4R3A-201ENST00000554308 KRTAP7-1Q8IUC3 87 aa9.35□□□□□ -0.91
PPP4R3A-201ENST00000554308 VPS13DQ5THJ4 4388 aa9.35□□□□□ -0.91
PPP4R3A-201ENST00000554308 A0A0U1RQV1 116 aa9.34□□□□□ -0.91
PPP4R3A-201ENST00000554308 PRYO14603 147 aa9.33□□□□□ -0.92
PPP4R3A-201ENST00000554308 KCNQ1DNQ9H478 68 aa9.33□□□□□ -0.92
PPP4R3A-201ENST00000554308 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
PPP4R3A-201ENST00000554308 A0A096LNI7 61 aa9.32□□□□□ -0.92
PPP4R3A-201ENST00000554308 A0A1W2PNM2 257 aa9.32□□□□□ -0.92
PPP4R3A-201ENST00000554308 ST20-AS1Q8NBB2 130 aa9.32□□□□□ -0.92
PPP4R3A-201ENST00000554308 ERC2-IT1O76042 136 aa9.31□□□□□ -0.92
PPP4R3A-201ENST00000554308 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
PPP4R3A-201ENST00000554308 Q9BRP9 147 aa9.31□□□□□ -0.92
PPP4R3A-201ENST00000554308 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
PPP4R3A-201ENST00000554308 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
PPP4R3A-201ENST00000554308 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
PPP4R3A-201ENST00000554308 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
PPP4R3A-201ENST00000554308 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
PPP4R3A-201ENST00000554308 LRCOL1A6NCL2 159 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms