RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 A0A087WZ39 114 aa5.65□□□□□ -1.5
TDP1-208ENST00000553989 PANO1I0J062 215 aa5.65□□□□□ -1.5
TDP1-208ENST00000553989 BAALC-AS2P0C853 105 aa5.65□□□□□ -1.5
TDP1-208ENST00000553989 SS18Q15532 418 aa5.65□□□□□ -1.5
TDP1-208ENST00000553989 IGHV3OR16-9A0A0B4J2B5 98 aa5.64□□□□□ -1.51
TDP1-208ENST00000553989 TEX49A0A1B0GTD5 131 aa5.64□□□□□ -1.51
TDP1-208ENST00000553989 NPC2P61916 151 aa5.64□□□□□ -1.51
TDP1-208ENST00000553989 SDIM1Q6ZPB5 146 aa5.64□□□□□ -1.51
TDP1-208ENST00000553989 Q6ZRU5 148 aa5.64□□□□□ -1.51
TDP1-208ENST00000553989 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
TDP1-208ENST00000553989 CHTF8P0CG12 524 aa5.63□□□□□ -1.51
TDP1-208ENST00000553989 LINC00158P58513 81 aa5.63□□□□□ -1.51
TDP1-208ENST00000553989 CNBPP62633 177 aaKnown RBP5.63□□□□□ -1.51
TDP1-208ENST00000553989 C6orf226Q5I0X4 101 aa5.63□□□□□ -1.51
TDP1-208ENST00000553989 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
TDP1-208ENST00000553989 CLEC2BQ92478 149 aa5.63□□□□□ -1.51
TDP1-208ENST00000553989 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
TDP1-208ENST00000553989 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 A0A087WYN8 130 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 IGKV3OR2-268A0A0C4DH90 116 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 LINC00959A0A1B0GUT2 108 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 KRTAP26-1Q6PEX3 210 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 SOSTDC1Q6X4U4 206 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 DAND5Q8N907 189 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 ANAPC13Q9BS18 74 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 SND1-IT1Q9HBX3 110 aa5.62□□□□□ -1.51
TDP1-208ENST00000553989 IGLV4-60A0A075B6I1 120 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 A0A0U1RRA0 63 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 A0A1B0GX51 115 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 MT1HL1P0DM35 61 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 COX17Q14061 63 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 MIR7-3HGQ8N6C7 128 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 SPACA4Q8TDM5 124 aa5.61□□□□□ -1.51
TDP1-208ENST00000553989 IGKV2-24A0A0C4DH68 120 aa5.6□□□□□ -1.51
TDP1-208ENST00000553989 CXCL5P42830 114 aa5.6□□□□□ -1.51
TDP1-208ENST00000553989 LINC00643Q86TS7 51 aa5.6□□□□□ -1.51
TDP1-208ENST00000553989 Q8IZM0 81 aa5.6□□□□□ -1.51
TDP1-208ENST00000553989 TOMM7Q9P0U1 55 aa5.6□□□□□ -1.51
TDP1-208ENST00000553989 TRBV7-7A0A0K0K1E9 115 aa5.59□□□□□ -1.51
TDP1-208ENST00000553989 DNAL4O96015 105 aa5.59□□□□□ -1.51
TDP1-208ENST00000553989 NDUFV3P56181 108 aaKnown RBP5.59□□□□□ -1.51
TDP1-208ENST00000553989 HIGD2BQ4VC39 106 aa5.59□□□□□ -1.51
TDP1-208ENST00000553989 NDUFC2O95298 119 aa5.58□□□□□ -1.52
TDP1-208ENST00000553989 SLPIP03973 132 aa5.58□□□□□ -1.52
TDP1-208ENST00000553989 CD164L2Q6UWJ8 174 aa5.58□□□□□ -1.52
TDP1-208ENST00000553989 C5orf38Q86SI9 138 aa5.58□□□□□ -1.52
TDP1-208ENST00000553989 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
TDP1-208ENST00000553989 H3BQ85 93 aa5.57□□□□□ -1.52
TDP1-208ENST00000553989 C15orf56Q8N910 161 aa5.57□□□□□ -1.52
TDP1-208ENST00000553989 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
TDP1-208ENST00000553989 PKHD1L1Q86WI1 4243 aa5.56□□□□□ -1.52
TDP1-208ENST00000553989 PRR3P79522 188 aaKnown RBP5.56□□□□□ -1.52
TDP1-208ENST00000553989 SMIM11BQ8TCY0 68 aa5.56□□□□□ -1.52
TDP1-208ENST00000553989 CHCHD10Q8WYQ3 142 aaPredicted RBP5.56□□□□□ -1.52
TDP1-208ENST00000553989 IGKV2-28A0A075B6P5 120 aa5.55□□□□□ -1.52
TDP1-208ENST00000553989 IGKV2D-28P01615 120 aa5.55□□□□□ -1.52
TDP1-208ENST00000553989 PFN2P35080 140 aa5.55□□□□□ -1.52
TDP1-208ENST00000553989 LINC00337Q8N6G1 96 aa5.55□□□□□ -1.52
TDP1-208ENST00000553989 OR13C6PQ8NH95 151 aa5.55□□□□□ -1.52
TDP1-208ENST00000553989 TMEM126AQ9H061 195 aa5.55□□□□□ -1.52
TDP1-208ENST00000553989 PKIGQ9Y2B9 76 aa5.55□□□□□ -1.52
TDP1-208ENST00000553989 A0A096LNI7 61 aa5.54□□□□□ -1.52
TDP1-208ENST00000553989 JMJD7-PLA2G4BH0Y9G9 81 aa5.54□□□□□ -1.52
TDP1-208ENST00000553989 XCL1P47992 114 aa5.54□□□□□ -1.52
TDP1-208ENST00000553989 REG3GQ6UW15 175 aa5.54□□□□□ -1.52
TDP1-208ENST00000553989 OBSCN-AS1Q96MR7 158 aa5.54□□□□□ -1.52
TDP1-208ENST00000553989 GVQW2A0A096LPI5 108 aaPredicted RBP5.53□□□□□ -1.52
TDP1-208ENST00000553989 S100A7L2Q5SY68 101 aa5.53□□□□□ -1.52
TDP1-208ENST00000553989 ORMDL1Q9P0S3 153 aa5.53□□□□□ -1.52
TDP1-208ENST00000553989 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
TDP1-208ENST00000553989 TMEM256-PLSCR3K7ERE1 68 aa5.52□□□□□ -1.53
TDP1-208ENST00000553989 KIAA0087Q14695 138 aa5.52□□□□□ -1.53
TDP1-208ENST00000553989 SPINK6Q6UWN8 80 aa5.52□□□□□ -1.53
TDP1-208ENST00000553989 FAM218AQ96MZ4 157 aa5.52□□□□□ -1.53
TDP1-208ENST00000553989 LINC00167Q96N53 147 aa5.52□□□□□ -1.53
TDP1-208ENST00000553989 LINC00526Q96FQ7 95 aa5.51□□□□□ -1.53
TDP1-208ENST00000553989 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
TDP1-208ENST00000553989 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
TDP1-208ENST00000553989 Q6ZRP5 223 aa5.5□□□□□ -1.53
TDP1-208ENST00000553989 F8WDY8 70 aa5.49□□□□□ -1.53
TDP1-208ENST00000553989 SYCNQ0VAF6 134 aa5.49□□□□□ -1.53
TDP1-208ENST00000553989 CCKP06307 115 aa5.48□□□□□ -1.53
TDP1-208ENST00000553989 PDE6GP18545 87 aa5.48□□□□□ -1.53
TDP1-208ENST00000553989 Q6JHZ5 121 aa5.48□□□□□ -1.53
TDP1-208ENST00000553989 LRP2P98164 4655 aa5.48□□□□□ -1.53
TDP1-208ENST00000553989 TRBV7-6A0A0J9YX20 115 aa5.46□□□□□ -1.54
TDP1-208ENST00000553989 LOC107984640A0A0U1RRK4 108 aa5.46□□□□□ -1.54
TDP1-208ENST00000553989 ATOX1O00244 68 aa5.46□□□□□ -1.54
TDP1-208ENST00000553989 KRTAP10-8P60410 259 aa5.46□□□□□ -1.54
TDP1-208ENST00000553989 RPL18AQ02543 176 aaKnown RBP5.46□□□□□ -1.54
TDP1-208ENST00000553989 ATP5EP2Q5VTU8 51 aa5.46□□□□□ -1.54
TDP1-208ENST00000553989 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.54
TDP1-208ENST00000553989 RNF213Q63HN8 5207 aa5.46□□□□□ -1.54
TDP1-208ENST00000553989 TRBV10-3A0A0K0K1G6 114 aa5.45□□□□□ -1.54
TDP1-208ENST00000553989 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
TDP1-208ENST00000553989 UQCRQO14949 82 aa5.45□□□□□ -1.54
TDP1-208ENST00000553989 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
TDP1-208ENST00000553989 LINC00575Q6W349 94 aa5.45□□□□□ -1.54
TDP1-208ENST00000553989 C3orf22Q8N5N4 141 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms