RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 CYSTM1Q9H1C7 97 aa8.28□□□□□ -1.08
VIPAS39-206ENST00000553888 MUC7Q8TAX7 377 aa8.28□□□□□ -1.08
VIPAS39-206ENST00000553888 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
VIPAS39-206ENST00000553888 PSCAO43653 123 aa8.27□□□□□ -1.09
VIPAS39-206ENST00000553888 TRACP01848 142 aa8.27□□□□□ -1.09
VIPAS39-206ENST00000553888 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
VIPAS39-206ENST00000553888 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
VIPAS39-206ENST00000553888 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
VIPAS39-206ENST00000553888 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
VIPAS39-206ENST00000553888 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.26□□□□□ -1.09
VIPAS39-206ENST00000553888 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
VIPAS39-206ENST00000553888 H3BT86 120 aa8.25□□□□□ -1.09
VIPAS39-206ENST00000553888 BAALC-AS2P0C853 105 aa8.25□□□□□ -1.09
VIPAS39-206ENST00000553888 TMEM258P61165 79 aa8.25□□□□□ -1.09
VIPAS39-206ENST00000553888 H0YGX0 51 aa8.25□□□□□ -1.09
VIPAS39-206ENST00000553888 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
VIPAS39-206ENST00000553888 DNAL4O96015 105 aa8.23□□□□□ -1.09
VIPAS39-206ENST00000553888 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
VIPAS39-206ENST00000553888 TRAV23DV6A0A075B6W5 121 aa8.22□□□□□ -1.09
VIPAS39-206ENST00000553888 INAFM2P0DMQ5 153 aa8.22□□□□□ -1.09
VIPAS39-206ENST00000553888 CRYGAP11844 174 aa8.22□□□□□ -1.09
VIPAS39-206ENST00000553888 KRTAP21-3Q3LHN1 58 aa8.22□□□□□ -1.09
VIPAS39-206ENST00000553888 M0R378 163 aa8.21□□□□□ -1.1
VIPAS39-206ENST00000553888 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.1
VIPAS39-206ENST00000553888 RBM12B-AS1Q9P1G2 102 aa8.21□□□□□ -1.1
VIPAS39-206ENST00000553888 Q8N814 137 aa8.2□□□□□ -1.1
VIPAS39-206ENST00000553888 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
VIPAS39-206ENST00000553888 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
VIPAS39-206ENST00000553888 Q6ZRN7 208 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-206ENST00000553888 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
VIPAS39-206ENST00000553888 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
VIPAS39-206ENST00000553888 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
VIPAS39-206ENST00000553888 COX7CP15954 63 aa8.19□□□□□ -1.1
VIPAS39-206ENST00000553888 NKAPP1Q8N9T2 125 aa8.19□□□□□ -1.1
VIPAS39-206ENST00000553888 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
VIPAS39-206ENST00000553888 LINC00575Q6W349 94 aa8.18□□□□□ -1.1
VIPAS39-206ENST00000553888 A0A096LNI7 61 aa8.18□□□□□ -1.1
VIPAS39-206ENST00000553888 DIRC1Q969H9 104 aa8.18□□□□□ -1.1
VIPAS39-206ENST00000553888 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
VIPAS39-206ENST00000553888 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
VIPAS39-206ENST00000553888 ORMDL1Q9P0S3 153 aa8.16□□□□□ -1.1
VIPAS39-206ENST00000553888 HECTD4Q9Y4D8 3996 aa8.15□□□□□ -1.1
VIPAS39-206ENST00000553888 CNBPP62633 177 aaKnown RBP8.15□□□□□ -1.1
VIPAS39-206ENST00000553888 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
VIPAS39-206ENST00000553888 COX7BP24311 80 aa8.14□□□□□ -1.11
VIPAS39-206ENST00000553888 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
VIPAS39-206ENST00000553888 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
VIPAS39-206ENST00000553888 Q6ZQY7 126 aa8.13□□□□□ -1.11
VIPAS39-206ENST00000553888 C14orf132Q9NPU4 83 aa8.13□□□□□ -1.11
VIPAS39-206ENST00000553888 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
VIPAS39-206ENST00000553888 C8orf87E5RJ46 101 aa8.13□□□□□ -1.11
VIPAS39-206ENST00000553888 LY6G6CO95867 125 aa8.13□□□□□ -1.11
VIPAS39-206ENST00000553888 DNAH17Q9UFH2 4485 aa8.12□□□□□ -1.11
VIPAS39-206ENST00000553888 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
VIPAS39-206ENST00000553888 FP248Q71RG6 208 aaPredicted RBP8.11□□□□□ -1.11
VIPAS39-206ENST00000553888 KCNQ1DNQ9H478 68 aa8.11□□□□□ -1.11
VIPAS39-206ENST00000553888 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
VIPAS39-206ENST00000553888 C16orf90A8MZG2 172 aa8.1□□□□□ -1.11
VIPAS39-206ENST00000553888 PANO1I0J062 215 aa8.1□□□□□ -1.11
VIPAS39-206ENST00000553888 Q6ZR54 194 aa8.1□□□□□ -1.11
VIPAS39-206ENST00000553888 LINC00528Q8N1L1 170 aa8.1□□□□□ -1.11
VIPAS39-206ENST00000553888 C14orf177Q52M58 125 aa8.1□□□□□ -1.11
VIPAS39-206ENST00000553888 IGLV5-37A0A075B6J1 123 aa8.09□□□□□ -1.11
VIPAS39-206ENST00000553888 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.11
VIPAS39-206ENST00000553888 C9orf163Q8N9P6 203 aa8.08□□□□□ -1.12
VIPAS39-206ENST00000553888 FRAS1Q86XX4 4008 aa8.08□□□□□ -1.12
VIPAS39-206ENST00000553888 DNAH6Q9C0G6 4158 aa8.07□□□□□ -1.12
VIPAS39-206ENST00000553888 A0A087WTM6 91 aa8.07□□□□□ -1.12
VIPAS39-206ENST00000553888 OBSCN-AS1Q96MR7 158 aa8.07□□□□□ -1.12
VIPAS39-206ENST00000553888 TMEM256-PLSCR3K7ERE1 68 aa8.07□□□□□ -1.12
VIPAS39-206ENST00000553888 KRTAP11-1Q8IUC1 163 aa8.07□□□□□ -1.12
VIPAS39-206ENST00000553888 WWC2-AS2Q96NR7 200 aa8.07□□□□□ -1.12
VIPAS39-206ENST00000553888 TRBV7-6A0A0J9YX20 115 aa8.06□□□□□ -1.12
VIPAS39-206ENST00000553888 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
VIPAS39-206ENST00000553888 ALMS1Q8TCU4 4167 aa8.06□□□□□ -1.12
VIPAS39-206ENST00000553888 KRTAP4-16G5E9R7 235 aaPredicted RBP8.06□□□□□ -1.12
VIPAS39-206ENST00000553888 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
VIPAS39-206ENST00000553888 Q9BRP9 147 aa8.06□□□□□ -1.12
VIPAS39-206ENST00000553888 LINC00476Q8WZB0 136 aa8.05□□□□□ -1.12
VIPAS39-206ENST00000553888 LINC00474Q9P2X8 69 aa8.04□□□□□ -1.12
VIPAS39-206ENST00000553888 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
VIPAS39-206ENST00000553888 SMCR5Q8TEV8 140 aa8.04□□□□□ -1.12
VIPAS39-206ENST00000553888 LAMTOR3Q9UHA4 124 aa8.04□□□□□ -1.12
VIPAS39-206ENST00000553888 SMIM26A0A096LP01 95 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 ETDCA0A1B0GVM5 59 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 PRYO14603 147 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 SPRR1AP35321 89 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 PRR15Q8IV56 129 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 DEFB105AQ8NG35 78 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 Q6ZRX8 168 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 DNAH8Q96JB1 4490 aa8.03□□□□□ -1.12
VIPAS39-206ENST00000553888 C1orf134Q5TEV5 83 aa8.02□□□□□ -1.12
VIPAS39-206ENST00000553888 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.02□□□□□ -1.12
VIPAS39-206ENST00000553888 DNAH11Q96DT5 4516 aa8.02□□□□□ -1.13
VIPAS39-206ENST00000553888 ERC2-IT1O76042 136 aa8.02□□□□□ -1.13
VIPAS39-206ENST00000553888 DNAH5Q8TE73 4624 aa8.02□□□□□ -1.13
VIPAS39-206ENST00000553888 RBM3P98179 157 aaKnown RBP8.02□□□□□ -1.13
VIPAS39-206ENST00000553888 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
VIPAS39-206ENST00000553888 ST20-AS1Q8NBB2 130 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms