RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 LINC01556Q5JQF7 62 aa3.47□□□□□ -1.85
TMEM55B-204ENST00000553602 Q5XG85 94 aa3.47□□□□□ -1.85
TMEM55B-204ENST00000553602 C15orf56Q8N910 161 aa3.47□□□□□ -1.85
TMEM55B-204ENST00000553602 CSMD2Q7Z408 3487 aa3.46□□□□□ -1.85
TMEM55B-204ENST00000553602 Q6ZRU5 148 aa3.46□□□□□ -1.86
TMEM55B-204ENST00000553602 KRTAP3-1Q9BYR8 98 aa3.46□□□□□ -1.86
TMEM55B-204ENST00000553602 XAGE1AQ9HD64 81 aa3.46□□□□□ -1.86
TMEM55B-204ENST00000553602 DHRS4-AS1Q9P1J3 65 aa3.46□□□□□ -1.86
TMEM55B-204ENST00000553602 HIVEP2P31629 2446 aa3.46□□□□□ -1.86
TMEM55B-204ENST00000553602 HIVEP1P15822 2718 aa3.46□□□□□ -1.86
TMEM55B-204ENST00000553602 WNK1Q9H4A3 2382 aa3.46□□□□□ -1.86
TMEM55B-204ENST00000553602 JMJD1CQ15652 2540 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 NSD1Q96L73 2696 aaPredicted RBP3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 LCE6AA0A183 80 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 PRYO14603 147 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 DEFB4AO15263 64 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 IGKV4-1P06312 121 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 SPRR1AP35321 89 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 NREPQ16612 68 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 KPRPQ5T749 579 aaPredicted RBP3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 SONP18583 2426 aaKnown RBP3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 PDZD2O15018 2839 aa3.45□□□□□ -1.86
TMEM55B-204ENST00000553602 SETD2Q9BYW2 2564 aaPredicted RBP3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 ZNF469Q96JG9 3925 aaPredicted RBP3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 SMIM26A0A096LP01 95 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 TRAV10A0A0B4J240 114 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 BPY2O14599 106 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 DNAH10OSP0CZ25 163 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 HTN3P15516 51 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 SYCNQ0VAF6 134 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 WFDC10BQ8IUB3 73 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 TMEM254Q8TBM7 123 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 MRAPQ8TCY5 172 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 LINC00476Q8WZB0 136 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 ZFHX3Q15911 3703 aa3.44□□□□□ -1.86
TMEM55B-204ENST00000553602 OTOGQ6ZRI0 2925 aa3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 A0A0U1RQV1 116 aa3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 KRTAP4-16G5E9R7 235 aaPredicted RBP3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 FUSP35637 526 aaKnown RBP eCLIP3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 HIGD2BQ4VC39 106 aa3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 Q6ZRP5 223 aa3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 Q6ZRX8 168 aa3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
TMEM55B-204ENST00000553602 F8WEM9 126 aa3.42□□□□□ -1.86
TMEM55B-204ENST00000553602 Q8NBF4 154 aa3.42□□□□□ -1.86
TMEM55B-204ENST00000553602 C7orf33Q8WU49 177 aa3.42□□□□□ -1.86
TMEM55B-204ENST00000553602 SPRR4Q96PI1 79 aa3.42□□□□□ -1.86
TMEM55B-204ENST00000553602 TM2D3Q9BRN9 247 aa3.42□□□□□ -1.86
TMEM55B-204ENST00000553602 MAP1AP78559 2803 aaPredicted RBP3.42□□□□□ -1.86
TMEM55B-204ENST00000553602 Q8N377 158 aa3.41□□□□□ -1.86
TMEM55B-204ENST00000553602 RMI2Q96E14 147 aa3.41□□□□□ -1.86
TMEM55B-204ENST00000553602 VPS13CQ709C8 3753 aa3.4□□□□□ -1.86
TMEM55B-204ENST00000553602 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
TMEM55B-204ENST00000553602 ESRGQ1W209 222 aa3.4□□□□□ -1.87
TMEM55B-204ENST00000553602 Q6ZTC4 211 aa3.4□□□□□ -1.87
TMEM55B-204ENST00000553602 SMR3AQ99954 134 aa3.4□□□□□ -1.87
TMEM55B-204ENST00000553602 KRTAP4-7Q9BYR0 210 aa3.4□□□□□ -1.87
TMEM55B-204ENST00000553602 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
TMEM55B-204ENST00000553602 FN1P02751 2386 aaKnown RBP3.4□□□□□ -1.87
TMEM55B-204ENST00000553602 IGLV8-61A0A075B6I0 122 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 IGKV2D-24A0A075B6R9 120 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 DEFB131BA0A096LNP1 70 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 ETDCA0A1B0GVM5 59 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 A0A1W2PNM2 257 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 RPL37AP8A6NKH3 93 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 INAFM1C9JVW0 142 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 C4orf26Q17RF5 130 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 KRTAP21-3Q3LHN1 58 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 SERTAD4-AS1Q5TG53 156 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 HRCT1Q6UXD1 115 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 SCXQ7RTU7 201 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
TMEM55B-204ENST00000553602 C1orf137Q5JT78 98 aa3.38□□□□□ -1.87
TMEM55B-204ENST00000553602 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
TMEM55B-204ENST00000553602 ZCCHC13Q8WW36 166 aaKnown RBP3.38□□□□□ -1.87
TMEM55B-204ENST00000553602 Q9BRP9 147 aa3.38□□□□□ -1.87
TMEM55B-204ENST00000553602 MRPL55Q7Z7F7 128 aaKnown RBP3.37□□□□□ -1.87
TMEM55B-204ENST00000553602 C3orf84H3BNL1 204 aa3.36□□□□□ -1.87
TMEM55B-204ENST00000553602 C11orf45Q8TAV5 145 aa3.36□□□□□ -1.87
TMEM55B-204ENST00000553602 RETNQ9HD89 108 aa3.36□□□□□ -1.87
TMEM55B-204ENST00000553602 NIPBLQ6KC79 2804 aaeCLIP3.36□□□□□ -1.87
TMEM55B-204ENST00000553602 ATRQ13535 2644 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 H0Y9J4 135 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 H3BPC8 53 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 NDUFB1O75438 58 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 DSCR10P59022 87 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 CNBPP62633 177 aaKnown RBP3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 REG3GQ6UW15 175 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 KRTAP7-1Q8IUC3 87 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 Q8N9L7 120 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 CYP4F30PQ9H0H9 118 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 PKIGQ9Y2B9 76 aa3.35□□□□□ -1.87
TMEM55B-204ENST00000553602 NF1P21359 2839 aa3.34□□□□□ -1.87
TMEM55B-204ENST00000553602 HCG22E2RYF7 251 aa3.34□□□□□ -1.87
TMEM55B-204ENST00000553602 SPRR1BP22528 89 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms