RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 C3orf79P0CE67 100 aa10.43□□□□□ -0.74
SHMT2-206ENST00000553529 NMUP48645 174 aa10.43□□□□□ -0.74
SHMT2-206ENST00000553529 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
SHMT2-206ENST00000553529 LINC01545Q5VT33 79 aa10.42□□□□□ -0.74
SHMT2-206ENST00000553529 PET117Q6UWS5 81 aa10.42□□□□□ -0.74
SHMT2-206ENST00000553529 Q8NBF4 154 aa10.42□□□□□ -0.74
SHMT2-206ENST00000553529 IGLV6-57P01721 117 aa10.41□□□□□ -0.74
SHMT2-206ENST00000553529 SPANXB1Q9NS25 103 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-206ENST00000553529 TRBV10-2A0A0K0K1G8 114 aa10.4□□□□□ -0.74
SHMT2-206ENST00000553529 MIEN1Q9BRT3 115 aa10.4□□□□□ -0.74
SHMT2-206ENST00000553529 MUC17Q685J3 4493 aa10.39□□□□□ -0.75
SHMT2-206ENST00000553529 IGLV9-49A0A0B4J1Y8 123 aa10.38□□□□□ -0.75
SHMT2-206ENST00000553529 LINC00483Q53H64 154 aa10.38□□□□□ -0.75
SHMT2-206ENST00000553529 S100A7L2Q5SY68 101 aa10.38□□□□□ -0.75
SHMT2-206ENST00000553529 Q6ZRX8 168 aa10.38□□□□□ -0.75
SHMT2-206ENST00000553529 ST20-AS1Q8NBB2 130 aa10.38□□□□□ -0.75
SHMT2-206ENST00000553529 ZNF706Q9Y5V0 76 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-206ENST00000553529 IGLV7-46A0A075B6I9 117 aa10.37□□□□□ -0.75
SHMT2-206ENST00000553529 TRAV23DV6A0A075B6W5 121 aa10.37□□□□□ -0.75
SHMT2-206ENST00000553529 NDUFC2O95298 119 aa10.37□□□□□ -0.75
SHMT2-206ENST00000553529 MOBPQ13875 183 aa10.36□□□□□ -0.75
SHMT2-206ENST00000553529 JOSD1Q15040 202 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-206ENST00000553529 ATOH7Q8N100 152 aa10.36□□□□□ -0.75
SHMT2-206ENST00000553529 LINC00308Q8TCZ7 52 aa10.36□□□□□ -0.75
SHMT2-206ENST00000553529 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
SHMT2-206ENST00000553529 SMIM6P0DI80 62 aa10.34□□□□□ -0.75
SHMT2-206ENST00000553529 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
SHMT2-206ENST00000553529 HSBP1L1C9JCN9 74 aa10.33□□□□□ -0.76
SHMT2-206ENST00000553529 ZNF73O43830 326 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-206ENST00000553529 S100A12P80511 92 aa10.32□□□□□ -0.76
SHMT2-206ENST00000553529 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
SHMT2-206ENST00000553529 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
SHMT2-206ENST00000553529 CDIP1Q9H305 208 aa10.3□□□□□ -0.76
SHMT2-206ENST00000553529 OR13C6PQ8NH95 151 aa10.29□□□□□ -0.76
SHMT2-206ENST00000553529 VAMP8Q9BV40 100 aa10.28□□□□□ -0.76
SHMT2-206ENST00000553529 SPANXCQ9NY87 97 aa10.28□□□□□ -0.76
SHMT2-206ENST00000553529 TIMM17BO60830 172 aa10.27□□□□□ -0.77
SHMT2-206ENST00000553529 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
SHMT2-206ENST00000553529 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
SHMT2-206ENST00000553529 PCP2Q8IVA1 136 aa10.27□□□□□ -0.77
SHMT2-206ENST00000553529 C12orf57Q99622 126 aa10.27□□□□□ -0.77
SHMT2-206ENST00000553529 C9orf153Q5TBE3 101 aa10.24□□□□□ -0.77
SHMT2-206ENST00000553529 PAM16Q9Y3D7 125 aa10.24□□□□□ -0.77
SHMT2-206ENST00000553529 KRTAP13-3Q3SY46 172 aa10.23□□□□□ -0.77
SHMT2-206ENST00000553529 Q8N377 158 aa10.23□□□□□ -0.77
SHMT2-206ENST00000553529 SPATA45Q537H7 98 aa10.22□□□□□ -0.77
SHMT2-206ENST00000553529 FAT4Q6V0I7 4981 aa10.22□□□□□ -0.77
SHMT2-206ENST00000553529 SPINK1P00995 79 aa10.21□□□□□ -0.77
SHMT2-206ENST00000553529 C6orf99Q4VX62 202 aa10.21□□□□□ -0.77
SHMT2-206ENST00000553529 LINC00518Q8N0U6 118 aa10.21□□□□□ -0.77
SHMT2-206ENST00000553529 SCGB1D4Q6XE38 83 aa10.2□□□□□ -0.78
SHMT2-206ENST00000553529 SPANXDQ9BXN6 97 aa10.2□□□□□ -0.78
SHMT2-206ENST00000553529 CTAG1AP78358 180 aa10.19□□□□□ -0.78
SHMT2-206ENST00000553529 HRCT1Q6UXD1 115 aa10.19□□□□□ -0.78
SHMT2-206ENST00000553529 SSBP3-AS1Q7Z2R9 100 aa10.18□□□□□ -0.78
SHMT2-206ENST00000553529 MUSTN1Q8IVN3 82 aa10.18□□□□□ -0.78
SHMT2-206ENST00000553529 KRTAP4-1Q9BYQ7 146 aa10.18□□□□□ -0.78
SHMT2-206ENST00000553529 COX7BP24311 80 aa10.17□□□□□ -0.78
SHMT2-206ENST00000553529 ELOF1P60002 83 aaKnown RBP10.17□□□□□ -0.78
SHMT2-206ENST00000553529 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-206ENST00000553529 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
SHMT2-206ENST00000553529 DEFB105AQ8NG35 78 aa10.16□□□□□ -0.78
SHMT2-206ENST00000553529 TSTD3H0UI37 97 aa10.15□□□□□ -0.78
SHMT2-206ENST00000553529 SPRR1BP22528 89 aa10.14□□□□□ -0.79
SHMT2-206ENST00000553529 Q1RN00 199 aa10.14□□□□□ -0.79
SHMT2-206ENST00000553529 HINT1P49773 126 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-206ENST00000553529 LCE2AQ5TA79 106 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-206ENST00000553529 A6NDN8 102 aa10.12□□□□□ -0.79
SHMT2-206ENST00000553529 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
SHMT2-206ENST00000553529 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
SHMT2-206ENST00000553529 DHRS4-AS1Q9P1J3 65 aa10.11□□□□□ -0.79
SHMT2-206ENST00000553529 LINC01547P58512 204 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-206ENST00000553529 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
SHMT2-206ENST00000553529 UQCR10Q9UDW1 63 aa10.1□□□□□ -0.79
SHMT2-206ENST00000553529 COX8AP10176 69 aa10.09□□□□□ -0.79
SHMT2-206ENST00000553529 RPS29P62273 56 aaKnown RBP10.09□□□□□ -0.79
SHMT2-206ENST00000553529 SMIM29Q86T20 159 aa10.09□□□□□ -0.79
SHMT2-206ENST00000553529 H7C2G1 150 aa10.08□□□□□ -0.8
SHMT2-206ENST00000553529 SLC25A20O43772 301 aa10.08□□□□□ -0.8
SHMT2-206ENST00000553529 IFITM1P13164 125 aa10.07□□□□□ -0.8
SHMT2-206ENST00000553529 TAL2Q16559 108 aa10.07□□□□□ -0.8
SHMT2-206ENST00000553529 SMIM11BQ8TCY0 68 aa10.07□□□□□ -0.8
SHMT2-206ENST00000553529 CBY1Q9Y3M2 126 aa10.06□□□□□ -0.8
SHMT2-206ENST00000553529 ASB16-AS1Q495Z4 193 aa10.05□□□□□ -0.8
SHMT2-206ENST00000553529 XP32Q5T750 250 aa10.05□□□□□ -0.8
SHMT2-206ENST00000553529 LAMTOR3Q9UHA4 124 aa10.05□□□□□ -0.8
SHMT2-206ENST00000553529 A0A0U1RQV1 116 aa10.04□□□□□ -0.8
SHMT2-206ENST00000553529 DLEU1O43261 78 aa10.04□□□□□ -0.8
SHMT2-206ENST00000553529 PCP4L1A6NKN8 68 aa10.03□□□□□ -0.8
SHMT2-206ENST00000553529 A0A1B0GWB2 263 aa10.02□□□□□ -0.81
SHMT2-206ENST00000553529 TRBV7-6A0A0J9YX20 115 aa10.01□□□□□ -0.81
SHMT2-206ENST00000553529 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
SHMT2-206ENST00000553529 A4D1N5 150 aa10.01□□□□□ -0.81
SHMT2-206ENST00000553529 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
SHMT2-206ENST00000553529 Q6ZVH6 145 aa10.01□□□□□ -0.81
SHMT2-206ENST00000553529 IGLV5-48A0A075B6I7 105 aa10□□□□□ -0.81
SHMT2-206ENST00000553529 TRAV13-2A0A0B4J235 113 aa9.97□□□□□ -0.81
SHMT2-206ENST00000553529 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
SHMT2-206ENST00000553529 HIGD1BQ9P298 99 aa9.96□□□□□ -0.82
SHMT2-206ENST00000553529 HIST1H4GQ99525 98 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms