RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PRO1933Q9H354 126 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 CST9LQ9H4G1 147 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 MRPL35Q9NZE8 188 aaKnown RBP2.93□□□□□ -1.94
CKAP4-203ENST00000553039 UBE2D4Q9Y2X8 147 aa2.93□□□□□ -1.94
CKAP4-203ENST00000553039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.92□□□□□ -1.94
CKAP4-203ENST00000553039 IGKV2-29A2NJV5 120 aaPredicted RBP2.92□□□□□ -1.94
CKAP4-203ENST00000553039 ZNF25P17030 456 aaPredicted RBP2.92□□□□□ -1.94
CKAP4-203ENST00000553039 HERVK_113P61574 105 aa2.92□□□□□ -1.94
CKAP4-203ENST00000553039 MRPS36P82909 103 aaKnown RBP2.92□□□□□ -1.94
CKAP4-203ENST00000553039 KRTAP13-3Q3SY46 172 aa2.92□□□□□ -1.94
CKAP4-203ENST00000553039 MRPL52Q86TS9 123 aaKnown RBP2.92□□□□□ -1.94
CKAP4-203ENST00000553039 TMEM101Q96IK0 257 aa2.92□□□□□ -1.94
CKAP4-203ENST00000553039 MIEN1Q9BRT3 115 aa2.92□□□□□ -1.94
CKAP4-203ENST00000553039 UQCR10Q9UDW1 63 aa2.92□□□□□ -1.94
CKAP4-203ENST00000553039 CBY1Q9Y3M2 126 aa2.92□□□□□ -1.94
CKAP4-203ENST00000553039 IGHV3OR16-9A0A0B4J2B5 98 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 IGLC3P0DOY3 106 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 NMUP48645 174 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 SEC11AP67812 179 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 FAM229BQ4G0N7 80 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 SLC25A34Q6PIV7 304 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 Q6ZUT4 128 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 MRPL55Q7Z7F7 128 aaKnown RBP2.91□□□□□ -1.94
CKAP4-203ENST00000553039 KRTAP11-1Q8IUC1 163 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 DAND5Q8N907 189 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 C14orf144Q96I85 54 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 AMELXQ99217 191 aa2.91□□□□□ -1.94
CKAP4-203ENST00000553039 MUC17Q685J3 4493 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 LINC00959A0A1B0GUT2 108 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 TINCRA0A1B0GVN0 87 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 CCL25O15444 150 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 COX8AP10176 69 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 Q1RN00 199 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 RNASE13Q5GAN3 156 aaKnown RBP2.9□□□□□ -1.95
CKAP4-203ENST00000553039 TMEM170BQ5T4T1 132 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 BOD1L2Q8IYS8 172 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 NDUFA12Q9UI09 145 aa2.9□□□□□ -1.95
CKAP4-203ENST00000553039 LINC00587B1AMM8 73 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 H3BRM9 83 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 COX7A2LO14548 114 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 DLEU1O43261 78 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 HERVK_113P63121 156 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 COX6B2Q6YFQ2 88 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 FAM19A5Q7Z5A7 132 aaPredicted RBP2.89□□□□□ -1.95
CKAP4-203ENST00000553039 FAM104AQ969W3 186 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
CKAP4-203ENST00000553039 TRAV13-1A0A0B4J241 112 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 FAM168BA1KXE4 195 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 ZNF22P17026 224 aaPredicted RBP2.88□□□□□ -1.95
CKAP4-203ENST00000553039 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
CKAP4-203ENST00000553039 KRTAP13-2Q52LG2 175 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 FAM19A3Q7Z5A8 133 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 PCP2Q8IVA1 136 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 ANAPC11Q9NYG5 84 aa2.88□□□□□ -1.95
CKAP4-203ENST00000553039 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 ZNF815PA8K554 130 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 J3QQQ9 107 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 M0R143 59 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 LEPROTO15243 131 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 CD164Q04900 197 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 SCGB1D4Q6XE38 83 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 C2orf91Q6ZV80 131 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 HIGD1BQ9P298 99 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 TP73-AS1Q9UF72 201 aa2.87□□□□□ -1.95
CKAP4-203ENST00000553039 A0A0J9YXY3 114 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 NDUFA1O15239 70 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 BCE1O60756 84 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 SPINK8P0C7L1 97 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 HSD52Q0P140 79 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 BATFQ16520 125 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 TTTY13Q9BZ97 58 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 CDKN2A-AS1Q9UH64 79 aa2.86□□□□□ -1.95
CKAP4-203ENST00000553039 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
CKAP4-203ENST00000553039 TMEM238C9JI98 176 aa2.85□□□□□ -1.95
CKAP4-203ENST00000553039 HINT1P49773 126 aaPredicted RBP2.85□□□□□ -1.95
CKAP4-203ENST00000553039 TSPEAR-AS2P59090 65 aa2.85□□□□□ -1.95
CKAP4-203ENST00000553039 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
CKAP4-203ENST00000553039 SNHG12Q9BXW3 62 aa2.85□□□□□ -1.95
CKAP4-203ENST00000553039 KRTAP16-1A8MUX0 517 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 SPINK1P00995 79 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 SPAG11BQ08648 103 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 PCOTHQ58A44 107 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 COL5A1-AS1Q5SY13 56 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 BVES-AS1Q5T3Y7 98 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 Q6ZVH6 145 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 C22orf24Q9Y442 160 aa2.84□□□□□ -1.95
CKAP4-203ENST00000553039 TIMM17BO60830 172 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 UBE2AP49459 152 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 LCE3BQ5TA77 95 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 C5orf38Q86SI9 138 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 KRTAP7-1Q8IUC3 87 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 CEND1Q8N111 149 aa2.83□□□□□ -1.96
CKAP4-203ENST00000553039 COX7B2Q8TF08 81 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms