RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	KRTAP13-1	Q8IUC0	172 aa		5.4	□□□□□ -1.54
ATXN2-223	ENST00000551551	LINC00518	Q8N0U6	118 aa		5.4	□□□□□ -1.54
ATXN2-223	ENST00000551551	C20orf202	A1L168	122 aa		5.39	□□□□□ -1.55
ATXN2-223	ENST00000551551		E9PLD3	99 aa		5.39	□□□□□ -1.55
ATXN2-223	ENST00000551551	ETDC	A0A1B0GVM5	59 aa		5.38	□□□□□ -1.55
ATXN2-223	ENST00000551551	SYS1-DBNDD2	H3BUS1	97 aa		5.38	□□□□□ -1.55
ATXN2-223	ENST00000551551	S100A7L2	Q5SY68	101 aa		5.38	□□□□□ -1.55
ATXN2-223	ENST00000551551	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.38	□□□□□ -1.55
ATXN2-223	ENST00000551551	TIMM17B	O60830	172 aa		5.37	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BK	O60814	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BJ	P06899	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BO	P23527	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BB	P33778	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	SPRR1A	P35321	89 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BD	P58876	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BC	P62807	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST2H2BE	Q16778	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	COA6	Q5JTJ3	125 aa	Known RBP	5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551		Q6ZVH6	145 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BH	Q93079	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BN	Q99877	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIST1H2BM	Q99879	126 aa		5.36	□□□□□ -1.55
ATXN2-223	ENST00000551551		A0A0J9YXY3	114 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	DDT	P30046	118 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	LINC00310	P59036	64 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	LINC01545	Q5VT33	79 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	SLC25A34	Q6PIV7	304 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	LINC00304	Q8N9R0	145 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	HIGD2A	Q9BW72	106 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	KRTAP4-11	Q9BYQ6	195 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	PPDPF	Q9H3Y8	114 aa		5.35	□□□□□ -1.55
ATXN2-223	ENST00000551551	TMEM238	C9JI98	176 aa		5.34	□□□□□ -1.55
ATXN2-223	ENST00000551551	S100A1	P23297	94 aa		5.34	□□□□□ -1.55
ATXN2-223	ENST00000551551	PRR4	Q16378	134 aa		5.34	□□□□□ -1.55
ATXN2-223	ENST00000551551	SPINK1	P00995	79 aa		5.33	□□□□□ -1.56
ATXN2-223	ENST00000551551	PRLH	P81277	87 aa		5.33	□□□□□ -1.56
ATXN2-223	ENST00000551551	SSBP3-AS1	Q7Z2R9	100 aa		5.33	□□□□□ -1.56
ATXN2-223	ENST00000551551	SPANXC	Q9NY87	97 aa		5.33	□□□□□ -1.56
ATXN2-223	ENST00000551551	HMCN2	Q8NDA2	5059 aa		5.33	□□□□□ -1.56
ATXN2-223	ENST00000551551	TNXB	P22105	4242 aa		5.32	□□□□□ -1.56
ATXN2-223	ENST00000551551	TRBV10-3	A0A0K0K1G6	114 aa		5.32	□□□□□ -1.56
ATXN2-223	ENST00000551551	IFITM1	P13164	125 aa		5.32	□□□□□ -1.56
ATXN2-223	ENST00000551551	SPRR4	Q96PI1	79 aa		5.32	□□□□□ -1.56
ATXN2-223	ENST00000551551		A0A087X002	238 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551		A0A0U1RQV1	116 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551	NCR3	O14931	201 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551	SCO1	O75880	301 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551	IGLV6-57	P01721	117 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551	RPS29	P62273	56 aa	Known RBP	5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551		Q6ZRX8	168 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551	SMCR5	Q8TEV8	140 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551	DHRS4-AS1	Q9P1J3	65 aa		5.31	□□□□□ -1.56
ATXN2-223	ENST00000551551	ZNF815P	A8K554	130 aa		5.3	□□□□□ -1.56
ATXN2-223	ENST00000551551	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	5.3	□□□□□ -1.56
ATXN2-223	ENST00000551551	ZNF73	O43830	326 aa	Predicted RBP	5.3	□□□□□ -1.56
ATXN2-223	ENST00000551551	SCGB1D4	Q6XE38	83 aa		5.3	□□□□□ -1.56
ATXN2-223	ENST00000551551	FP248	Q71RG6	208 aa	Predicted RBP	5.3	□□□□□ -1.56
ATXN2-223	ENST00000551551	PMCHL2	Q9BQD1	86 aa		5.3	□□□□□ -1.56
ATXN2-223	ENST00000551551	SPANXD	Q9BXN6	97 aa		5.3	□□□□□ -1.56
ATXN2-223	ENST00000551551	TRAV23DV6	A0A075B6W5	121 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	TRBV7-6	A0A0J9YX20	115 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	TSPAN13	O95857	204 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	C3orf79	P0CE67	100 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	S100A2	P29034	98 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	TSPEAR-AS2	P59090	65 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	KRTDAP	P60985	99 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	LINC00483	Q53H64	154 aa		5.29	□□□□□ -1.56
ATXN2-223	ENST00000551551	OR13C6P	Q8NH95	151 aa		5.28	□□□□□ -1.56
ATXN2-223	ENST00000551551	LINC00308	Q8TCZ7	52 aa		5.28	□□□□□ -1.56
ATXN2-223	ENST00000551551	KRTAP9-7	A8MTY7	169 aa		5.27	□□□□□ -1.57
ATXN2-223	ENST00000551551	VAMP3	Q15836	100 aa		5.27	□□□□□ -1.57
ATXN2-223	ENST00000551551	KRTAP13-2	Q52LG2	175 aa		5.27	□□□□□ -1.57
ATXN2-223	ENST00000551551	DAND5	Q8N907	189 aa		5.27	□□□□□ -1.57
ATXN2-223	ENST00000551551		Q8NDZ9	215 aa		5.27	□□□□□ -1.57
ATXN2-223	ENST00000551551	NHP2	Q9NX24	153 aa	Known RBP	5.27	□□□□□ -1.57
ATXN2-223	ENST00000551551	TRAV13-2	A0A0B4J235	113 aa		5.26	□□□□□ -1.57
ATXN2-223	ENST00000551551	TPRXL	Q17RH7	258 aa		5.26	□□□□□ -1.57
ATXN2-223	ENST00000551551	ADAMTSL4-AS1	Q5T5F5	129 aa		5.26	□□□□□ -1.57
ATXN2-223	ENST00000551551		Q6ZVQ6	151 aa		5.25	□□□□□ -1.57
ATXN2-223	ENST00000551551	ANAPC11	Q9NYG5	84 aa		5.25	□□□□□ -1.57
ATXN2-223	ENST00000551551	LAMTOR3	Q9UHA4	124 aa		5.25	□□□□□ -1.57
ATXN2-223	ENST00000551551	IGLV7-46	A0A075B6I9	117 aa		5.24	□□□□□ -1.57
ATXN2-223	ENST00000551551		A0A1B0GWB2	263 aa		5.24	□□□□□ -1.57
ATXN2-223	ENST00000551551	SLC25A20	O43772	301 aa		5.24	□□□□□ -1.57
ATXN2-223	ENST00000551551	SNCG	O76070	127 aa		5.24	□□□□□ -1.57
ATXN2-223	ENST00000551551	KRTAP19-4	Q3LI73	84 aa		5.24	□□□□□ -1.57
ATXN2-223	ENST00000551551	LITAF	Q99732	161 aa		5.23	□□□□□ -1.57
ATXN2-223	ENST00000551551	IGLV9-49	A0A0B4J1Y8	123 aa		5.22	□□□□□ -1.57
ATXN2-223	ENST00000551551	COX7B	P24311	80 aa		5.22	□□□□□ -1.57
ATXN2-223	ENST00000551551		Q8NBF4	154 aa		5.22	□□□□□ -1.57
ATXN2-223	ENST00000551551		Q9BRP9	147 aa		5.22	□□□□□ -1.57
ATXN2-223	ENST00000551551	TEX49	A0A1B0GTD5	131 aa		5.21	□□□□□ -1.58
ATXN2-223	ENST00000551551		A6NDN8	102 aa		5.21	□□□□□ -1.58
ATXN2-223	ENST00000551551	SPRR1B	P22528	89 aa		5.21	□□□□□ -1.58
ATXN2-223	ENST00000551551	ELOF1	P60002	83 aa	Known RBP	5.21	□□□□□ -1.58
ATXN2-223	ENST00000551551	CD164	Q04900	197 aa		5.21	□□□□□ -1.58
ATXN2-223	ENST00000551551	TAL2	Q16559	108 aa		5.21	□□□□□ -1.58
ATXN2-223	ENST00000551551	SOSTDC1	Q6X4U4	206 aa		5.21	□□□□□ -1.58
ATXN2-223	ENST00000551551	C3orf22	Q8N5N4	141 aa		5.21	□□□□□ -1.58

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