RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 C22orf24Q9Y442 160 aa2.9□□□□□ -1.95
CCDC59-204ENST00000550589 GCN1Q92616 2671 aaKnown RBP2.89□□□□□ -1.95
CCDC59-204ENST00000550589 NIPBLQ6KC79 2804 aaeCLIP2.89□□□□□ -1.95
CCDC59-204ENST00000550589 LOC110117498A0A087WWA1 95 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 UQCRQO14949 82 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 Q6ZQY7 126 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 Q6ZRU5 148 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 MRAPQ8TCY5 172 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 LINC00526Q96FQ7 95 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 RETNQ9HD89 108 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 ATRQ13535 2644 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 TLX1NBP0CAT3 122 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 TM2D3Q9BRN9 247 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 LINC00846Q9NV44 126 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 PKIGQ9Y2B9 76 aa2.89□□□□□ -1.95
CCDC59-204ENST00000550589 TEP1Q99973 2627 aaKnown RBP2.89□□□□□ -1.95
CCDC59-204ENST00000550589 VPREB1P12018 145 aa2.88□□□□□ -1.95
CCDC59-204ENST00000550589 HIST1H4AP62805 103 aaKnown RBP2.88□□□□□ -1.95
CCDC59-204ENST00000550589 KRTAP26-1Q6PEX3 210 aa2.88□□□□□ -1.95
CCDC59-204ENST00000550589 C15orf56Q8N910 161 aa2.88□□□□□ -1.95
CCDC59-204ENST00000550589 SMCR5Q8TEV8 140 aa2.88□□□□□ -1.95
CCDC59-204ENST00000550589 UPK3BQ9BT76 320 aa2.88□□□□□ -1.95
CCDC59-204ENST00000550589 NBEAL2Q6ZNJ1 2754 aa2.88□□□□□ -1.95
CCDC59-204ENST00000550589 HIVEP1P15822 2718 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 A0A1B0GW54 56 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 NHLRC4P0CG21 123 aaPredicted RBP2.87□□□□□ -1.95
CCDC59-204ENST00000550589 SMIM20Q8N5G0 67 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 C3orf22Q8N5N4 141 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 DHRS4-AS1Q9P1J3 65 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 BCE1O60756 84 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 Q6ZQT0 140 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 Q6ZRP5 223 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 KCNQ1DNQ9H478 68 aa2.87□□□□□ -1.95
CCDC59-204ENST00000550589 TRRAPQ9Y4A5 3859 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 IGKV3D-7A0A0C4DH55 119 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 COX7CP15954 63 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 KRTAP10-6P60371 365 aaPredicted RBP2.86□□□□□ -1.95
CCDC59-204ENST00000550589 C14orf177Q52M58 125 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 C9orf129Q5T035 196 aaKnown RBP2.86□□□□□ -1.95
CCDC59-204ENST00000550589 C9orf153Q5TBE3 101 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 LINC00588Q9Y4M8 146 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 F8P00451 2351 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 LOC107984640A0A0U1RRK4 108 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 ETDCA0A1B0GVM5 59 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 CCDC179H3BU77 68 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 PRYO14603 147 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 PSCAO43653 123 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 CXCL6P80162 114 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 SERP2Q8N6R1 65 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 Q8NDZ9 215 aa2.86□□□□□ -1.95
CCDC59-204ENST00000550589 IGLV5-37A0A075B6J1 123 aa2.85□□□□□ -1.95
CCDC59-204ENST00000550589 TRBV7-4A0A0J9YYF1 115 aa2.85□□□□□ -1.95
CCDC59-204ENST00000550589 USP17L23D6RBM5 183 aa2.85□□□□□ -1.95
CCDC59-204ENST00000550589 FUSP35637 526 aaKnown RBP eCLIP2.85□□□□□ -1.95
CCDC59-204ENST00000550589 UBE2DNLQ8IWF7 75 aa2.85□□□□□ -1.95
CCDC59-204ENST00000550589 CRYGAP11844 174 aa2.84□□□□□ -1.95
CCDC59-204ENST00000550589 HAMPP81172 84 aa2.84□□□□□ -1.95
CCDC59-204ENST00000550589 VWFP04275 2813 aa2.84□□□□□ -1.95
CCDC59-204ENST00000550589 K7EIL1 84 aa2.84□□□□□ -1.96
CCDC59-204ENST00000550589 MRPL55Q7Z7F7 128 aaKnown RBP2.84□□□□□ -1.96
CCDC59-204ENST00000550589 IGLV1-50A0A075B6I6 118 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 LINC01547P58512 204 aaPredicted RBP2.83□□□□□ -1.96
CCDC59-204ENST00000550589 NREPQ16612 68 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 Q6ZRX8 168 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 Q6ZVQ6 151 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 C7orf33Q8WU49 177 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 TENM1Q9UKZ4 2725 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 F8WEM9 126 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 LINC00474Q9P2X8 69 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 SS18L2Q9UHA2 77 aa2.83□□□□□ -1.96
CCDC59-204ENST00000550589 NUPR2A6NF83 97 aa2.82□□□□□ -1.96
CCDC59-204ENST00000550589 C16orf90A8MZG2 172 aa2.82□□□□□ -1.96
CCDC59-204ENST00000550589 SPRR1AP35321 89 aa2.82□□□□□ -1.96
CCDC59-204ENST00000550589 CNBPP62633 177 aaKnown RBP2.82□□□□□ -1.96
CCDC59-204ENST00000550589 REG3GQ6UW15 175 aa2.82□□□□□ -1.96
CCDC59-204ENST00000550589 FLNBO75369 2602 aaKnown RBP2.82□□□□□ -1.96
CCDC59-204ENST00000550589 IGLV5-48A0A075B6I7 105 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 A0A087WVE0 104 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 RPL37AP8A6NKH3 93 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 TMEM258P61165 79 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 UBE2BP63146 152 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 SERTAD4-AS1Q5TG53 156 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 DEFB105AQ8NG35 78 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 B9D2Q9BPU9 175 aa2.81□□□□□ -1.96
CCDC59-204ENST00000550589 PRB2P02812 416 aaPredicted RBP2.81□□□□□ -1.96
CCDC59-204ENST00000550589 ANK2Q01484 3957 aa2.8□□□□□ -1.96
CCDC59-204ENST00000550589 TRAV7A0A075B6U4 112 aa2.8□□□□□ -1.96
CCDC59-204ENST00000550589 BPY2O14599 106 aa2.8□□□□□ -1.96
CCDC59-204ENST00000550589 FAM19A5Q7Z5A7 132 aaPredicted RBP2.8□□□□□ -1.96
CCDC59-204ENST00000550589 FAM19A1Q7Z5A9 133 aa2.8□□□□□ -1.96
CCDC59-204ENST00000550589 NDUFC1O43677 76 aa2.8□□□□□ -1.96
CCDC59-204ENST00000550589 C1orf137Q5JT78 98 aa2.8□□□□□ -1.96
CCDC59-204ENST00000550589 Q8N377 158 aa2.8□□□□□ -1.96
CCDC59-204ENST00000550589 KRTAP4-16G5E9R7 235 aaPredicted RBP2.79□□□□□ -1.96
CCDC59-204ENST00000550589 RPS28P62857 69 aaKnown RBP2.79□□□□□ -1.96
CCDC59-204ENST00000550589 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
CCDC59-204ENST00000550589 APLNQ9ULZ1 77 aa2.79□□□□□ -1.96
CCDC59-204ENST00000550589 J3KT08 172 aa2.78□□□□□ -1.96
CCDC59-204ENST00000550589 MAST4O15021 2626 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms