RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 M0QY20 66 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 TSHBP01222 138 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 PLA2G2AP14555 144 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 TSPEAR-AS2P59090 65 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 MOBPQ13875 183 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 DEFB114Q30KQ6 69 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 SUMO4Q6EEV6 95 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
PTPRB-207ENST00000549400 RPL39LQ96EH5 51 aaKnown RBP2.65□□□□□ -1.99
PTPRB-207ENST00000549400 VWFP04275 2813 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 PCLOQ9Y6V0 5065 aa2.65□□□□□ -1.99
PTPRB-207ENST00000549400 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 IGHV3-38A0A0C4DH36 116 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 LOC101927531A0A1B0GV80 90 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
PTPRB-207ENST00000549400 NDUFB1O75438 58 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 LY6G6DO95868 133 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 PDE6GP18545 87 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 KRTAP10-11P60412 298 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 ODF3L2Q3SX64 289 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 CASC2Q6XLA1 102 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 MAPK1IP1LQ8NDC0 245 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 LITAFQ99732 161 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 CDC42SE2Q9NRR3 84 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 ORMDL1Q9P0S3 153 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 CELA1Q9UNI1 258 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 HIVEP2P31629 2446 aa2.64□□□□□ -1.99
PTPRB-207ENST00000549400 HUWE1Q7Z6Z7 4374 aaKnown RBP2.64□□□□□ -1.99
PTPRB-207ENST00000549400 DNAH9Q9NYC9 4486 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 H3BQ85 93 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 J3QKU1 62 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 BPY2O14599 106 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 IGLV1-51P01701 117 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 IGHV3-53P01767 116 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 PROK1P58294 105 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 LINC01547P58512 204 aaPredicted RBP2.63□□□□□ -1.99
PTPRB-207ENST00000549400 SPINK13Q1W4C9 94 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 FAM74A4Q5TZK3 123 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 C20orf203Q8NBC4 194 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 WFDC9Q8NEX5 89 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 LINC01006Q8NI28 216 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 RETNLBQ9BQ08 111 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 SND1-IT1Q9HBX3 110 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 XAGE1AQ9HD64 81 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 AGRNO00468 2067 aa2.63□□□□□ -1.99
PTPRB-207ENST00000549400 TENM1Q9UKZ4 2725 aa2.62□□□□□ -1.99
PTPRB-207ENST00000549400 NACAE9PAV3 2078 aa2.62□□□□□ -1.99
PTPRB-207ENST00000549400 HIVEP1P15822 2718 aa2.62□□□□□ -1.99
PTPRB-207ENST00000549400 LRCOL1A6NCL2 159 aa2.62□□□□□ -1.99
PTPRB-207ENST00000549400 GIG44P09565 113 aaPredicted RBP2.62□□□□□ -1.99
PTPRB-207ENST00000549400 DEFB131AP59861 70 aa2.62□□□□□ -1.99
PTPRB-207ENST00000549400 DEFB136Q30KP8 78 aa2.62□□□□□ -1.99
PTPRB-207ENST00000549400 Q8N9P0 234 aaPredicted RBP2.62□□□□□ -1.99
PTPRB-207ENST00000549400 ZNF625Q96I27 306 aaPredicted RBP2.62□□□□□ -1.99
PTPRB-207ENST00000549400 PRR15LQ9BU68 103 aa2.62□□□□□ -1.99
PTPRB-207ENST00000549400 SORL1Q92673 2214 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 IGKV3-7A0A075B6H7 116 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 IGLV4-3A0A075B6K6 122 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 IGLV5-45A0A087WSX0 123 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 IGLV5-52A0A0A0MRZ9 124 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 TRBV10-1A0A0K0K1A3 114 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 KRTAP23-1A1A580 65 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 INSP01308 110 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 IGHV3-30-3P0DP02 117 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 CMC4P56277 68 aaPredicted RBP2.61□□□□□ -1.99
PTPRB-207ENST00000549400 HAMPP81172 84 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 LINC00612Q8N6U2 182 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 CSNK1G2-AS1Q8NCQ2 148 aa2.61□□□□□ -1.99
PTPRB-207ENST00000549400 WNK1Q9H4A3 2382 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 LOC110117498A0A087WWA1 95 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 A8MU10 97 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 KRTAP16-1A8MUX0 517 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 NCR3O14931 201 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 MGPP08493 103 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 KRTAP10-7P60409 375 aaPredicted RBP2.6□□□□□ -1.99
PTPRB-207ENST00000549400 MIR7-3HGQ8N6C7 128 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 Q8N814 137 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 LINC00308Q8TCZ7 52 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 LINC00476Q8WZB0 136 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 B9D2Q9BPU9 175 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 Q9BRP9 147 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 CHCHD7Q9BUK0 85 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
PTPRB-207ENST00000549400 LCE6AA0A183 80 aa2.59□□□□□ -1.99
PTPRB-207ENST00000549400 NDUFA1O15239 70 aa2.59□□□□□ -1.99
PTPRB-207ENST00000549400 RPL39P62891 51 aaKnown RBP2.59□□□□□ -1.99
PTPRB-207ENST00000549400 RPL36AP83881 106 aaKnown RBP2.59□□□□□ -1.99
PTPRB-207ENST00000549400 EGFEM1PQ0D2K5 195 aa2.59□□□□□ -1.99
PTPRB-207ENST00000549400 LINC00167Q96N53 147 aa2.59□□□□□ -1.99
PTPRB-207ENST00000549400 HIGD2AQ9BW72 106 aa2.59□□□□□ -1.99
PTPRB-207ENST00000549400 IGLV5-39A0A0G2JS06 123 aa2.58□□□□□ -2
PTPRB-207ENST00000549400 TRBV6-4A0A1B0GX49 114 aa2.58□□□□□ -2
PTPRB-207ENST00000549400 IGKV3-20P01619 116 aa2.58□□□□□ -2
PTPRB-207ENST00000549400 KRTAP10-3P60369 221 aa2.58□□□□□ -2
PTPRB-207ENST00000549400 PLECQ15149 4684 aaKnown RBP2.58□□□□□ -2
PTPRB-207ENST00000549400 RNASE13Q5GAN3 156 aaKnown RBP2.58□□□□□ -2
PTPRB-207ENST00000549400 C1orf134Q5TEV5 83 aa2.58□□□□□ -2
PTPRB-207ENST00000549400 REG3GQ6UW15 175 aa2.58□□□□□ -2
PTPRB-207ENST00000549400 C16orf74Q96GX8 76 aa2.58□□□□□ -2
PTPRB-207ENST00000549400 VPS13DQ5THJ4 4388 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms