RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 LINC00167Q96N53 147 aa7.36□□□□□ -1.23
LINC00661-204ENST00000549354 C11orf45Q8TAV5 145 aa7.35□□□□□ -1.23
LINC00661-204ENST00000549354 DEFB116Q30KQ4 102 aa7.35□□□□□ -1.23
LINC00661-204ENST00000549354 DIRC1Q969H9 104 aa7.35□□□□□ -1.23
LINC00661-204ENST00000549354 MDFIQ99750 246 aa7.35□□□□□ -1.23
LINC00661-204ENST00000549354 A0A096LNI7 61 aa7.35□□□□□ -1.23
LINC00661-204ENST00000549354 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
LINC00661-204ENST00000549354 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
LINC00661-204ENST00000549354 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
LINC00661-204ENST00000549354 ESRGQ1W209 222 aa7.34□□□□□ -1.24
LINC00661-204ENST00000549354 MUC7Q8TAX7 377 aa7.34□□□□□ -1.24
LINC00661-204ENST00000549354 CASC10Q5T4H9 136 aa7.33□□□□□ -1.24
LINC00661-204ENST00000549354 DEFB131BA0A096LNP1 70 aa7.33□□□□□ -1.24
LINC00661-204ENST00000549354 IGLV6-57P01721 117 aa7.32□□□□□ -1.24
LINC00661-204ENST00000549354 BPY2O14599 106 aa7.32□□□□□ -1.24
LINC00661-204ENST00000549354 COX7BP24311 80 aa7.32□□□□□ -1.24
LINC00661-204ENST00000549354 ATP5EP2Q5VTU8 51 aa7.32□□□□□ -1.24
LINC00661-204ENST00000549354 FAM236DA0A1B0GTK5 79 aa7.31□□□□□ -1.24
LINC00661-204ENST00000549354 LRCOL1A6NCL2 159 aa7.31□□□□□ -1.24
LINC00661-204ENST00000549354 F8WEM9 126 aa7.31□□□□□ -1.24
LINC00661-204ENST00000549354 FAM236CP0DP71 79 aa7.31□□□□□ -1.24
LINC00661-204ENST00000549354 SEC61GP60059 68 aa7.31□□□□□ -1.24
LINC00661-204ENST00000549354 NKAPP1Q8N9T2 125 aa7.31□□□□□ -1.24
LINC00661-204ENST00000549354 PRR4Q16378 134 aa7.3□□□□□ -1.24
LINC00661-204ENST00000549354 Q6ZRP5 223 aa7.3□□□□□ -1.24
LINC00661-204ENST00000549354 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.3□□□□□ -1.24
LINC00661-204ENST00000549354 RPS28P62857 69 aaKnown RBP7.3□□□□□ -1.24
LINC00661-204ENST00000549354 LYSTQ99698 3801 aa7.29□□□□□ -1.24
LINC00661-204ENST00000549354 H7BZZ5 65 aa7.29□□□□□ -1.24
LINC00661-204ENST00000549354 TGP01266 2768 aa7.29□□□□□ -1.24
LINC00661-204ENST00000549354 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
LINC00661-204ENST00000549354 FUSP35637 526 aaKnown RBP eCLIP7.28□□□□□ -1.24
LINC00661-204ENST00000549354 KRTAP26-1Q6PEX3 210 aa7.28□□□□□ -1.24
LINC00661-204ENST00000549354 ST20-AS1Q8NBB2 130 aa7.28□□□□□ -1.24
LINC00661-204ENST00000549354 LINC01556Q5JQF7 62 aa7.28□□□□□ -1.24
LINC00661-204ENST00000549354 SERTAD4-AS1Q5TG53 156 aa7.27□□□□□ -1.24
LINC00661-204ENST00000549354 Q5XG85 94 aa7.27□□□□□ -1.24
LINC00661-204ENST00000549354 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
LINC00661-204ENST00000549354 LOC110117498A0A087WWA1 95 aa7.27□□□□□ -1.25
LINC00661-204ENST00000549354 UBE2BP63146 152 aa7.26□□□□□ -1.25
LINC00661-204ENST00000549354 DNAH10OSP0CZ25 163 aa7.26□□□□□ -1.25
LINC00661-204ENST00000549354 VPREB1P12018 145 aa7.25□□□□□ -1.25
LINC00661-204ENST00000549354 LINC00474Q9P2X8 69 aa7.25□□□□□ -1.25
LINC00661-204ENST00000549354 NREPQ16612 68 aa7.24□□□□□ -1.25
LINC00661-204ENST00000549354 ELOF1P60002 83 aaKnown RBP7.24□□□□□ -1.25
LINC00661-204ENST00000549354 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
LINC00661-204ENST00000549354 MPLKIPQ8TAP9 179 aa7.24□□□□□ -1.25
LINC00661-204ENST00000549354 GVQW2A0A096LPI5 108 aaPredicted RBP7.23□□□□□ -1.25
LINC00661-204ENST00000549354 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
LINC00661-204ENST00000549354 B9D2Q9BPU9 175 aa7.23□□□□□ -1.25
LINC00661-204ENST00000549354 HIGD2AQ9BW72 106 aa7.23□□□□□ -1.25
LINC00661-204ENST00000549354 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
LINC00661-204ENST00000549354 TRBV7-4A0A0J9YYF1 115 aa7.22□□□□□ -1.25
LINC00661-204ENST00000549354 LINC00588Q9Y4M8 146 aa7.22□□□□□ -1.25
LINC00661-204ENST00000549354 M0R378 163 aa7.21□□□□□ -1.26
LINC00661-204ENST00000549354 NDUFC2-KCTD14E9PQ53 114 aa7.21□□□□□ -1.26
LINC00661-204ENST00000549354 C7orf33Q8WU49 177 aa7.21□□□□□ -1.26
LINC00661-204ENST00000549354 PRLHP81277 87 aa7.2□□□□□ -1.26
LINC00661-204ENST00000549354 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
LINC00661-204ENST00000549354 ETDCA0A1B0GVM5 59 aa7.2□□□□□ -1.26
LINC00661-204ENST00000549354 PDE6GP18545 87 aa7.2□□□□□ -1.26
LINC00661-204ENST00000549354 CXCL6P80162 114 aa7.2□□□□□ -1.26
LINC00661-204ENST00000549354 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
LINC00661-204ENST00000549354 LINC00528Q8N1L1 170 aa7.19□□□□□ -1.26
LINC00661-204ENST00000549354 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
LINC00661-204ENST00000549354 ERC2-IT1O76042 136 aa7.19□□□□□ -1.26
LINC00661-204ENST00000549354 LINC00336Q6ZUF6 198 aa7.19□□□□□ -1.26
LINC00661-204ENST00000549354 PSCAO43653 123 aa7.18□□□□□ -1.26
LINC00661-204ENST00000549354 KLKP1Q107X0 134 aa7.18□□□□□ -1.26
LINC00661-204ENST00000549354 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
LINC00661-204ENST00000549354 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
LINC00661-204ENST00000549354 DYNC2H1Q8NCM8 4307 aaKnown RBP7.16□□□□□ -1.26
LINC00661-204ENST00000549354 TRBV7-6A0A0J9YX20 115 aa7.16□□□□□ -1.26
LINC00661-204ENST00000549354 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
LINC00661-204ENST00000549354 IGKV4-1P06312 121 aa7.16□□□□□ -1.26
LINC00661-204ENST00000549354 WFDC13Q8IUB5 93 aa7.16□□□□□ -1.26
LINC00661-204ENST00000549354 Q8N377 158 aa7.16□□□□□ -1.26
LINC00661-204ENST00000549354 FAM229BQ4G0N7 80 aa7.15□□□□□ -1.26
LINC00661-204ENST00000549354 SMIM29Q86T20 159 aa7.14□□□□□ -1.27
LINC00661-204ENST00000549354 PKIGQ9Y2B9 76 aa7.14□□□□□ -1.27
LINC00661-204ENST00000549354 DNAH1Q9P2D7 4330 aa7.14□□□□□ -1.27
LINC00661-204ENST00000549354 APLNQ9ULZ1 77 aa7.14□□□□□ -1.27
LINC00661-204ENST00000549354 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
LINC00661-204ENST00000549354 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
LINC00661-204ENST00000549354 BRK1Q8WUW1 75 aa7.12□□□□□ -1.27
LINC00661-204ENST00000549354 C1orf137Q5JT78 98 aa7.12□□□□□ -1.27
LINC00661-204ENST00000549354 UBE2DNLQ8IWF7 75 aa7.11□□□□□ -1.27
LINC00661-204ENST00000549354 Q9BRP9 147 aa7.11□□□□□ -1.27
LINC00661-204ENST00000549354 A0A1W2PNM2 257 aa7.1□□□□□ -1.27
LINC00661-204ENST00000549354 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
LINC00661-204ENST00000549354 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
LINC00661-204ENST00000549354 PRYO14603 147 aa7.09□□□□□ -1.27
LINC00661-204ENST00000549354 OCR1Q9BZK8 76 aa7.09□□□□□ -1.28
LINC00661-204ENST00000549354 H3BQ85 93 aa7.08□□□□□ -1.28
LINC00661-204ENST00000549354 EPM2AB3EWF7 344 aa7.08□□□□□ -1.28
LINC00661-204ENST00000549354 TLX1NBP0CAT3 122 aa7.08□□□□□ -1.28
LINC00661-204ENST00000549354 A0A087WSZ3 146 aa7.07□□□□□ -1.28
LINC00661-204ENST00000549354 NUPR2A6NF83 97 aa7.07□□□□□ -1.28
LINC00661-204ENST00000549354 K7EQZ3 153 aa7.07□□□□□ -1.28
LINC00661-204ENST00000549354 Q6ZRX8 168 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms