RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 LINC00483Q53H64 154 aa8.46□□□□□ -1.06
LINC00661-203ENST00000549131 Q8NBF4 154 aa8.46□□□□□ -1.06
LINC00661-203ENST00000549131 LITAFQ99732 161 aa8.46□□□□□ -1.06
LINC00661-203ENST00000549131 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
LINC00661-203ENST00000549131 ZNF73O43830 326 aaPredicted RBP8.45□□□□□ -1.06
LINC00661-203ENST00000549131 TIMM17BO60830 172 aa8.45□□□□□ -1.06
LINC00661-203ENST00000549131 CTAG1AP78358 180 aa8.45□□□□□ -1.06
LINC00661-203ENST00000549131 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
LINC00661-203ENST00000549131 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
LINC00661-203ENST00000549131 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
LINC00661-203ENST00000549131 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
LINC00661-203ENST00000549131 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
LINC00661-203ENST00000549131 IGLV9-49A0A0B4J1Y8 123 aa8.44□□□□□ -1.06
LINC00661-203ENST00000549131 JOSD1Q15040 202 aaPredicted RBP8.44□□□□□ -1.06
LINC00661-203ENST00000549131 C20orf202A1L168 122 aa8.43□□□□□ -1.06
LINC00661-203ENST00000549131 MOBPQ13875 183 aa8.43□□□□□ -1.06
LINC00661-203ENST00000549131 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
LINC00661-203ENST00000549131 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
LINC00661-203ENST00000549131 CBY1Q9Y3M2 126 aa8.42□□□□□ -1.06
LINC00661-203ENST00000549131 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
LINC00661-203ENST00000549131 SCGB1D4Q6XE38 83 aa8.41□□□□□ -1.06
LINC00661-203ENST00000549131 HINT1P49773 126 aaPredicted RBP8.4□□□□□ -1.06
LINC00661-203ENST00000549131 ATOH7Q8N100 152 aa8.4□□□□□ -1.06
LINC00661-203ENST00000549131 CDIP1Q9H305 208 aa8.4□□□□□ -1.06
LINC00661-203ENST00000549131 MUC2Q02817 5179 aa8.39□□□□□ -1.07
LINC00661-203ENST00000549131 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
LINC00661-203ENST00000549131 ANKRD39Q53RE8 183 aa8.38□□□□□ -1.07
LINC00661-203ENST00000549131 C9orf153Q5TBE3 101 aa8.38□□□□□ -1.07
LINC00661-203ENST00000549131 SPINK1P00995 79 aa8.37□□□□□ -1.07
LINC00661-203ENST00000549131 ST20-AS1Q8NBB2 130 aa8.37□□□□□ -1.07
LINC00661-203ENST00000549131 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
LINC00661-203ENST00000549131 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
LINC00661-203ENST00000549131 AKR1D1P51857 326 aa8.34□□□□□ -1.07
LINC00661-203ENST00000549131 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
LINC00661-203ENST00000549131 COPS9Q8WXC6 57 aa8.34□□□□□ -1.07
LINC00661-203ENST00000549131 DHRS4-AS1Q9P1J3 65 aa8.34□□□□□ -1.07
LINC00661-203ENST00000549131 C6orf99Q4VX62 202 aa8.33□□□□□ -1.08
LINC00661-203ENST00000549131 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
LINC00661-203ENST00000549131 A0A0U1RQV1 116 aa8.32□□□□□ -1.08
LINC00661-203ENST00000549131 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
LINC00661-203ENST00000549131 COX7BP24311 80 aa8.32□□□□□ -1.08
LINC00661-203ENST00000549131 ELOF1P60002 83 aaKnown RBP8.32□□□□□ -1.08
LINC00661-203ENST00000549131 IFITM1P13164 125 aa8.31□□□□□ -1.08
LINC00661-203ENST00000549131 S100A2P29034 98 aa8.31□□□□□ -1.08
LINC00661-203ENST00000549131 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
LINC00661-203ENST00000549131 HIST3H2BBQ8N257 126 aa8.3□□□□□ -1.08
LINC00661-203ENST00000549131 Q8N377 158 aa8.3□□□□□ -1.08
LINC00661-203ENST00000549131 A6NDN8 102 aa8.29□□□□□ -1.08
LINC00661-203ENST00000549131 SLC25A34Q6PIV7 304 aa8.29□□□□□ -1.08
LINC00661-203ENST00000549131 Q6ZVH6 145 aa8.29□□□□□ -1.08
LINC00661-203ENST00000549131 HIST1H2BLQ99880 126 aa8.29□□□□□ -1.08
LINC00661-203ENST00000549131 MUC17Q685J3 4493 aa8.28□□□□□ -1.08
LINC00661-203ENST00000549131 SLC25A20O43772 301 aa8.28□□□□□ -1.08
LINC00661-203ENST00000549131 S100A1P23297 94 aa8.28□□□□□ -1.08
LINC00661-203ENST00000549131 SNRPEP62304 92 aaKnown RBP8.28□□□□□ -1.08
LINC00661-203ENST00000549131 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
LINC00661-203ENST00000549131 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
LINC00661-203ENST00000549131 SPRR1BP22528 89 aa8.27□□□□□ -1.09
LINC00661-203ENST00000549131 HSBP1L1C9JCN9 74 aa8.26□□□□□ -1.09
LINC00661-203ENST00000549131 S100A6P06703 90 aa8.26□□□□□ -1.09
LINC00661-203ENST00000549131 LAMTOR3Q9UHA4 124 aa8.26□□□□□ -1.09
LINC00661-203ENST00000549131 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
LINC00661-203ENST00000549131 A0A1B0GWB2 263 aa8.25□□□□□ -1.09
LINC00661-203ENST00000549131 TAL2Q16559 108 aa8.25□□□□□ -1.09
LINC00661-203ENST00000549131 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
LINC00661-203ENST00000549131 Q1RN00 199 aa8.24□□□□□ -1.09
LINC00661-203ENST00000549131 TRAV13-2A0A0B4J235 113 aa8.23□□□□□ -1.09
LINC00661-203ENST00000549131 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
LINC00661-203ENST00000549131 LIMD2Q9BT23 127 aa8.22□□□□□ -1.09
LINC00661-203ENST00000549131 TEX49A0A1B0GTD5 131 aa8.21□□□□□ -1.1
LINC00661-203ENST00000549131 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
LINC00661-203ENST00000549131 A4D1N5 150 aa8.19□□□□□ -1.1
LINC00661-203ENST00000549131 NHP2Q9NX24 153 aaKnown RBP8.19□□□□□ -1.1
LINC00661-203ENST00000549131 FAT4Q6V0I7 4981 aa8.19□□□□□ -1.1
LINC00661-203ENST00000549131 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
LINC00661-203ENST00000549131 IGLV5-48A0A075B6I7 105 aa8.17□□□□□ -1.1
LINC00661-203ENST00000549131 PRO1933Q9H354 126 aa8.17□□□□□ -1.1
LINC00661-203ENST00000549131 LINC01547P58512 204 aaPredicted RBP8.16□□□□□ -1.1
LINC00661-203ENST00000549131 ASB16-AS1Q495Z4 193 aa8.16□□□□□ -1.1
LINC00661-203ENST00000549131 H7C2G1 150 aa8.15□□□□□ -1.1
LINC00661-203ENST00000549131 SMIM29Q86T20 159 aa8.15□□□□□ -1.1
LINC00661-203ENST00000549131 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
LINC00661-203ENST00000549131 CD164Q04900 197 aa8.14□□□□□ -1.11
LINC00661-203ENST00000549131 VAMP3Q15836 100 aa8.14□□□□□ -1.11
LINC00661-203ENST00000549131 HIST1H4GQ99525 98 aa8.13□□□□□ -1.11
LINC00661-203ENST00000549131 C12orf57Q99622 126 aa8.13□□□□□ -1.11
LINC00661-203ENST00000549131 XP32Q5T750 250 aa8.12□□□□□ -1.11
LINC00661-203ENST00000549131 A0A0G2JQZ4 141 aa8.11□□□□□ -1.11
LINC00661-203ENST00000549131 F8WEM9 126 aa8.11□□□□□ -1.11
LINC00661-203ENST00000549131 COX8AP10176 69 aa8.1□□□□□ -1.11
LINC00661-203ENST00000549131 LINC00575Q6W349 94 aa8.1□□□□□ -1.11
LINC00661-203ENST00000549131 C9orf92A6NGG3 77 aa8.09□□□□□ -1.11
LINC00661-203ENST00000549131 LCE2AQ5TA79 106 aaPredicted RBP8.09□□□□□ -1.11
LINC00661-203ENST00000549131 Q6ZQY7 126 aa8.09□□□□□ -1.11
LINC00661-203ENST00000549131 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
LINC00661-203ENST00000549131 KRTAP4-1Q9BYQ7 146 aa8.06□□□□□ -1.12
LINC00661-203ENST00000549131 PAM16Q9Y3D7 125 aa8.06□□□□□ -1.12
LINC00661-203ENST00000549131 DLEU1O43261 78 aa8.05□□□□□ -1.12
LINC00661-203ENST00000549131 SPATA45Q537H7 98 aa8.05□□□□□ -1.12
LINC00661-203ENST00000549131 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms