RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 FUSP35637 526 aaKnown RBP eCLIP15.22■□□□□ 0.03
NPAS3-206ENST00000548645 HIVEP1P15822 2718 aa15.21■□□□□ 0.03
NPAS3-206ENST00000548645 ANK3Q12955 4377 aaKnown RBP15.21■□□□□ 0.02
NPAS3-206ENST00000548645 KRTAP26-1Q6PEX3 210 aa15.2■□□□□ 0.02
NPAS3-206ENST00000548645 C1orf43Q9BWL3 253 aa15.2■□□□□ 0.02
NPAS3-206ENST00000548645 C15orf56Q8N910 161 aa15.19■□□□□ 0.02
NPAS3-206ENST00000548645 WFDC10BQ8IUB3 73 aa15.19■□□□□ 0.02
NPAS3-206ENST00000548645 DEFB105AQ8NG35 78 aa15.17■□□□□ 0.02
NPAS3-206ENST00000548645 IGLV5-48A0A075B6I7 105 aa15.16■□□□□ 0.02
NPAS3-206ENST00000548645 FAM229BQ4G0N7 80 aa15.16■□□□□ 0.02
NPAS3-206ENST00000548645 Q6ZRP5 223 aa15.16■□□□□ 0.02
NPAS3-206ENST00000548645 HIGD2AQ9BW72 106 aa15.16■□□□□ 0.02
NPAS3-206ENST00000548645 KPRPQ5T749 579 aaPredicted RBP15.16■□□□□ 0.02
NPAS3-206ENST00000548645 Q8N377 158 aa15.16■□□□□ 0.02
NPAS3-206ENST00000548645 KCNQ1DNQ9H478 68 aa15.16■□□□□ 0.02
NPAS3-206ENST00000548645 ESRGQ1W209 222 aa15.15■□□□□ 0.02
NPAS3-206ENST00000548645 A0A1B0GW54 56 aa15.15■□□□□ 0.02
NPAS3-206ENST00000548645 Q6ZTC4 211 aa15.15■□□□□ 0.02
NPAS3-206ENST00000548645 NKAPP1Q8N9T2 125 aa15.13■□□□□ 0.01
NPAS3-206ENST00000548645 MPLKIPQ8TAP9 179 aa15.13■□□□□ 0.01
NPAS3-206ENST00000548645 BRK1Q8WUW1 75 aa15.13■□□□□ 0.01
NPAS3-206ENST00000548645 F8WDY8 70 aa15.11■□□□□ 0.01
NPAS3-206ENST00000548645 NSD1Q96L73 2696 aaPredicted RBP15.11■□□□□ 0.01
NPAS3-206ENST00000548645 SMIM29Q86T20 159 aa15.1■□□□□ 0.01
NPAS3-206ENST00000548645 SYCNQ0VAF6 134 aa15.08■□□□□ 0
NPAS3-206ENST00000548645 FAM30AQ9NZY2 134 aa15.08■□□□□ 0
NPAS3-206ENST00000548645 H3BNG1 76 aa15.08■□□□□ 0
NPAS3-206ENST00000548645 C7orf33Q8WU49 177 aa15.08■□□□□ 0
NPAS3-206ENST00000548645 DHRS4-AS1Q9P1J3 65 aa15.08■□□□□ 0
NPAS3-206ENST00000548645 TEP1Q99973 2627 aaKnown RBP15.08■□□□□ 0
NPAS3-206ENST00000548645 PKIGQ9Y2B9 76 aa15.07■□□□□ 0
NPAS3-206ENST00000548645 VWFP04275 2813 aa15.06■□□□□ 0
NPAS3-206ENST00000548645 F8P00451 2351 aa15.06■□□□□ 0
NPAS3-206ENST00000548645 A0A1W2PNM2 257 aa15.05■□□□□ 0
NPAS3-206ENST00000548645 SERTAD4-AS1Q5TG53 156 aa15.05■□□□□ -0
NPAS3-206ENST00000548645 LCE6AA0A183 80 aa15.04■□□□□ -0
NPAS3-206ENST00000548645 C1orf137Q5JT78 98 aa15.03■□□□□ -0
NPAS3-206ENST00000548645 IGKV2D-24A0A075B6R9 120 aa15.02■□□□□ -0
NPAS3-206ENST00000548645 Q6ZRX8 168 aa15.02■□□□□ -0
NPAS3-206ENST00000548645 Q8NBF4 154 aa15.01□□□□□ -0.01
NPAS3-206ENST00000548645 TNP2Q05952 138 aa15□□□□□ -0.01
NPAS3-206ENST00000548645 BAHCC1Q9P281 2608 aa14.98□□□□□ -0.01
NPAS3-206ENST00000548645 hDV103S1A0JD37 113 aa14.97□□□□□ -0.01
NPAS3-206ENST00000548645 Q9BRP9 147 aa14.97□□□□□ -0.01
NPAS3-206ENST00000548645 ETDCA0A1B0GVM5 59 aa14.96□□□□□ -0.01
NPAS3-206ENST00000548645 PLA2G2DQ9UNK4 145 aa14.96□□□□□ -0.01
NPAS3-206ENST00000548645 SPRR4Q96PI1 79 aa14.96□□□□□ -0.01
NPAS3-206ENST00000548645 INAFM1C9JVW0 142 aa14.96□□□□□ -0.02
NPAS3-206ENST00000548645 KRTAP4-16G5E9R7 235 aaPredicted RBP14.95□□□□□ -0.02
NPAS3-206ENST00000548645 LINC01556Q5JQF7 62 aa14.95□□□□□ -0.02
NPAS3-206ENST00000548645 RPL37AP8A6NKH3 93 aa14.95□□□□□ -0.02
NPAS3-206ENST00000548645 ATRQ13535 2644 aa14.94□□□□□ -0.02
NPAS3-206ENST00000548645 DSCR10P59022 87 aa14.94□□□□□ -0.02
NPAS3-206ENST00000548645 TLX1NBP0CAT3 122 aa14.93□□□□□ -0.02
NPAS3-206ENST00000548645 TENM1Q9UKZ4 2725 aa14.93□□□□□ -0.02
NPAS3-206ENST00000548645 ZCCHC13Q8WW36 166 aaKnown RBP14.93□□□□□ -0.02
NPAS3-206ENST00000548645 IGLV1-50A0A075B6I6 118 aa14.92□□□□□ -0.02
NPAS3-206ENST00000548645 ST20-AS1Q8NBB2 130 aa14.92□□□□□ -0.02
NPAS3-206ENST00000548645 SPRR1AP35321 89 aa14.92□□□□□ -0.02
NPAS3-206ENST00000548645 K7EQZ3 153 aa14.89□□□□□ -0.03
NPAS3-206ENST00000548645 C1orf195Q5TG92 126 aa14.89□□□□□ -0.03
NPAS3-206ENST00000548645 IGLV5-37A0A075B6J1 123 aa14.89□□□□□ -0.03
NPAS3-206ENST00000548645 C1orf64Q8NEQ6 169 aa14.89□□□□□ -0.03
NPAS3-206ENST00000548645 RETNQ9HD89 108 aa14.87□□□□□ -0.03
NPAS3-206ENST00000548645 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.86□□□□□ -0.03
NPAS3-206ENST00000548645 FAM168BA1KXE4 195 aa14.86□□□□□ -0.03
NPAS3-206ENST00000548645 Q1T7F1 81 aa14.86□□□□□ -0.03
NPAS3-206ENST00000548645 HCG22E2RYF7 251 aa14.84□□□□□ -0.03
NPAS3-206ENST00000548645 LRCOL1A6NCL2 159 aa14.83□□□□□ -0.03
NPAS3-206ENST00000548645 UBE2BP63146 152 aa14.82□□□□□ -0.04
NPAS3-206ENST00000548645 CYP4F30PQ9H0H9 118 aa14.8□□□□□ -0.04
NPAS3-206ENST00000548645 DNAH10OSP0CZ25 163 aa14.78□□□□□ -0.04
NPAS3-206ENST00000548645 MRPL55Q7Z7F7 128 aaKnown RBP14.78□□□□□ -0.04
NPAS3-206ENST00000548645 PSCAO43653 123 aa14.78□□□□□ -0.04
NPAS3-206ENST00000548645 DEFB131BA0A096LNP1 70 aa14.77□□□□□ -0.05
NPAS3-206ENST00000548645 NDUFB1O75438 58 aa14.77□□□□□ -0.05
NPAS3-206ENST00000548645 KRTAP7-1Q8IUC3 87 aa14.77□□□□□ -0.05
NPAS3-206ENST00000548645 LINC00476Q8WZB0 136 aa14.77□□□□□ -0.05
NPAS3-206ENST00000548645 MAST4O15021 2626 aa14.75□□□□□ -0.05
NPAS3-206ENST00000548645 V9GYY9 64 aa14.75□□□□□ -0.05
NPAS3-206ENST00000548645 TRRAPQ9Y4A5 3859 aa14.73□□□□□ -0.05
NPAS3-206ENST00000548645 PRR15Q8IV56 129 aa14.73□□□□□ -0.05
NPAS3-206ENST00000548645 REG3GQ6UW15 175 aa14.72□□□□□ -0.05
NPAS3-206ENST00000548645 PRR4Q16378 134 aa14.71□□□□□ -0.05
NPAS3-206ENST00000548645 MP68P56378 58 aa14.71□□□□□ -0.06
NPAS3-206ENST00000548645 IGFL1Q6UW32 110 aa14.69□□□□□ -0.06
NPAS3-206ENST00000548645 TRAV22A0A0B4J277 110 aa14.68□□□□□ -0.06
NPAS3-206ENST00000548645 C11orf45Q8TAV5 145 aa14.68□□□□□ -0.06
NPAS3-206ENST00000548645 STAB1Q9NY15 2570 aa14.68□□□□□ -0.06
NPAS3-206ENST00000548645 WFDC13Q8IUB5 93 aa14.68□□□□□ -0.06
NPAS3-206ENST00000548645 CASC10Q5T4H9 136 aa14.67□□□□□ -0.06
NPAS3-206ENST00000548645 PKD1L1Q8TDX9 2849 aa14.67□□□□□ -0.06
NPAS3-206ENST00000548645 PSPHP1O15172 72 aa14.67□□□□□ -0.06
NPAS3-206ENST00000548645 DEFB116Q30KQ4 102 aa14.66□□□□□ -0.06
NPAS3-206ENST00000548645 A0A0G2JQZ4 141 aa14.65□□□□□ -0.06
NPAS3-206ENST00000548645 A0A1W2PNN7 141 aa14.65□□□□□ -0.06
NPAS3-206ENST00000548645 OXLD1Q5BKU9 147 aa14.65□□□□□ -0.06
NPAS3-206ENST00000548645 FBN1P35555 2871 aaKnown RBP14.63□□□□□ -0.07
NPAS3-206ENST00000548645 A0A087WSZ3 146 aa14.62□□□□□ -0.07
NPAS3-206ENST00000548645 KRTAP10-11P60412 298 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms