RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 PKHD1L1Q86WI1 4243 aa3.09□□□□□ -1.91
APP-217ENST00000548570 HNRNPA3P51991 378 aaKnown RBP3.09□□□□□ -1.91
APP-217ENST00000548570 MUSTN1Q8IVN3 82 aa3.09□□□□□ -1.91
APP-217ENST00000548570 MTURNQ8N3F0 131 aa3.09□□□□□ -1.91
APP-217ENST00000548570 C7orf33Q8WU49 177 aa3.09□□□□□ -1.91
APP-217ENST00000548570 SPANXDQ9BXN6 97 aa3.09□□□□□ -1.91
APP-217ENST00000548570 PRO1933Q9H354 126 aa3.09□□□□□ -1.91
APP-217ENST00000548570 SPANXCQ9NY87 97 aa3.09□□□□□ -1.91
APP-217ENST00000548570 LINC00474Q9P2X8 69 aa3.09□□□□□ -1.91
APP-217ENST00000548570 LINC00587B1AMM8 73 aa3.08□□□□□ -1.92
APP-217ENST00000548570 M0QXV9 152 aa3.08□□□□□ -1.92
APP-217ENST00000548570 SLC25A34Q6PIV7 304 aa3.08□□□□□ -1.92
APP-217ENST00000548570 SCGB1D4Q6XE38 83 aa3.08□□□□□ -1.92
APP-217ENST00000548570 LINC00167Q96N53 147 aa3.08□□□□□ -1.92
APP-217ENST00000548570 C12orf57Q99622 126 aa3.08□□□□□ -1.92
APP-217ENST00000548570 PPDPFQ9H3Y8 114 aa3.08□□□□□ -1.92
APP-217ENST00000548570 HIGD1BQ9P298 99 aa3.08□□□□□ -1.92
APP-217ENST00000548570 FAT3Q8TDW7 4589 aa3.08□□□□□ -1.92
APP-217ENST00000548570 IGLV1-50A0A075B6I6 118 aa3.07□□□□□ -1.92
APP-217ENST00000548570 RPL37AP8A6NKH3 93 aa3.07□□□□□ -1.92
APP-217ENST00000548570 TMEM238C9JI98 176 aa3.07□□□□□ -1.92
APP-217ENST00000548570 NCR3O14931 201 aa3.07□□□□□ -1.92
APP-217ENST00000548570 NDUFC2O95298 119 aa3.07□□□□□ -1.92
APP-217ENST00000548570 KRTAP15-1Q3LI76 137 aa3.07□□□□□ -1.92
APP-217ENST00000548570 MRPL55Q7Z7F7 128 aaKnown RBP3.07□□□□□ -1.92
APP-217ENST00000548570 LINC00337Q8N6G1 96 aa3.07□□□□□ -1.92
APP-217ENST00000548570 DPH3Q96FX2 82 aa3.07□□□□□ -1.92
APP-217ENST00000548570 PSORS1C2Q9UIG4 136 aa3.07□□□□□ -1.92
APP-217ENST00000548570 PKIGQ9Y2B9 76 aa3.07□□□□□ -1.92
APP-217ENST00000548570 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
APP-217ENST00000548570 MYCBP2O75592 4640 aa3.07□□□□□ -1.92
APP-217ENST00000548570 TRBV10-3A0A0K0K1G6 114 aa3.06□□□□□ -1.92
APP-217ENST00000548570 TRBV10-2A0A0K0K1G8 114 aa3.06□□□□□ -1.92
APP-217ENST00000548570 KRTAP4-16G5E9R7 235 aaPredicted RBP3.06□□□□□ -1.92
APP-217ENST00000548570 M0R378 163 aa3.06□□□□□ -1.92
APP-217ENST00000548570 IGLV6-57P01721 117 aa3.06□□□□□ -1.92
APP-217ENST00000548570 IFITM1P13164 125 aa3.06□□□□□ -1.92
APP-217ENST00000548570 FXYD2P54710 66 aa3.06□□□□□ -1.92
APP-217ENST00000548570 Q5VSD8 79 aa3.06□□□□□ -1.92
APP-217ENST00000548570 Q6ZVH6 145 aa3.06□□□□□ -1.92
APP-217ENST00000548570 KRTAP13-1Q8IUC0 172 aa3.06□□□□□ -1.92
APP-217ENST00000548570 MIEN1Q9BRT3 115 aa3.06□□□□□ -1.92
APP-217ENST00000548570 UQCR10Q9UDW1 63 aa3.06□□□□□ -1.92
APP-217ENST00000548570 SRRM2Q9UQ35 2752 aaKnown RBP3.06□□□□□ -1.92
APP-217ENST00000548570 SPRR1AP35321 89 aa3.05□□□□□ -1.92
APP-217ENST00000548570 SRSF9Q13242 221 aaKnown RBP eCLIP3.05□□□□□ -1.92
APP-217ENST00000548570 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
APP-217ENST00000548570 TSPAN13O95857 204 aa3.04□□□□□ -1.92
APP-217ENST00000548570 CFC1BP0CG36 223 aa3.04□□□□□ -1.92
APP-217ENST00000548570 CFC1P0CG37 223 aa3.04□□□□□ -1.92
APP-217ENST00000548570 RPL37AP61513 92 aaKnown RBP3.04□□□□□ -1.92
APP-217ENST00000548570 RPL24P83731 157 aaKnown RBP3.04□□□□□ -1.92
APP-217ENST00000548570 CEND1Q8N111 149 aa3.04□□□□□ -1.92
APP-217ENST00000548570 NKAPP1Q8N9T2 125 aa3.04□□□□□ -1.92
APP-217ENST00000548570 HIST1H4GQ99525 98 aa3.04□□□□□ -1.92
APP-217ENST00000548570 TMEM126AQ9H061 195 aa3.04□□□□□ -1.92
APP-217ENST00000548570 A0A1B0GWB2 263 aa3.03□□□□□ -1.92
APP-217ENST00000548570 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
APP-217ENST00000548570 K7ERJ3 54 aa3.03□□□□□ -1.92
APP-217ENST00000548570 IGLV7-43P04211 117 aa3.03□□□□□ -1.92
APP-217ENST00000548570 DDTP30046 118 aa3.03□□□□□ -1.92
APP-217ENST00000548570 HSD52Q0P140 79 aa3.03□□□□□ -1.92
APP-217ENST00000548570 TAL2Q16559 108 aa3.03□□□□□ -1.92
APP-217ENST00000548570 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
APP-217ENST00000548570 BVES-AS1Q5T3Y7 98 aa3.03□□□□□ -1.92
APP-217ENST00000548570 A0A1B0GV72 72 aa3.02□□□□□ -1.93
APP-217ENST00000548570 BCE1O60756 84 aa3.02□□□□□ -1.93
APP-217ENST00000548570 UBE2BP63146 152 aa3.02□□□□□ -1.93
APP-217ENST00000548570 PRLHP81277 87 aa3.02□□□□□ -1.93
APP-217ENST00000548570 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
APP-217ENST00000548570 Q6ZVQ6 151 aa3.02□□□□□ -1.93
APP-217ENST00000548570 SMCR5Q8TEV8 140 aa3.02□□□□□ -1.93
APP-217ENST00000548570 TRAV23DV6A0A075B6W5 121 aa3.01□□□□□ -1.93
APP-217ENST00000548570 A0A0B4J2C4 111 aa3.01□□□□□ -1.93
APP-217ENST00000548570 ZNF73O43830 326 aaPredicted RBP3.01□□□□□ -1.93
APP-217ENST00000548570 ZNF861PO60384 105 aa3.01□□□□□ -1.93
APP-217ENST00000548570 ERC2-IT1O76042 136 aa3.01□□□□□ -1.93
APP-217ENST00000548570 KRTAP1-4P0C5Y4 121 aa3.01□□□□□ -1.93
APP-217ENST00000548570 PRR26Q8N8Z3 221 aa3.01□□□□□ -1.93
APP-217ENST00000548570 SMIM11BQ8TCY0 68 aa3.01□□□□□ -1.93
APP-217ENST00000548570 Q9BRP9 147 aa3.01□□□□□ -1.93
APP-217ENST00000548570 TNXBP22105 4242 aa3.01□□□□□ -1.93
APP-217ENST00000548570 HERC1Q15751 4861 aa3□□□□□ -1.93
APP-217ENST00000548570 TRAV13-2A0A0B4J235 113 aa3□□□□□ -1.93
APP-217ENST00000548570 A6NDN8 102 aa3□□□□□ -1.93
APP-217ENST00000548570 TSTD3H0UI37 97 aa3□□□□□ -1.93
APP-217ENST00000548570 HINT1P49773 126 aaPredicted RBP3□□□□□ -1.93
APP-217ENST00000548570 C6orf99Q4VX62 202 aa3□□□□□ -1.93
APP-217ENST00000548570 S100A7L2Q5SY68 101 aa3□□□□□ -1.93
APP-217ENST00000548570 OR13C6PQ8NH95 151 aa3□□□□□ -1.93
APP-217ENST00000548570 H0Y9J4 135 aa2.99□□□□□ -1.93
APP-217ENST00000548570 RPL28P46779 137 aaKnown RBP2.99□□□□□ -1.93
APP-217ENST00000548570 ELOF1P60002 83 aaKnown RBP2.99□□□□□ -1.93
APP-217ENST00000548570 SPINK6Q6UWN8 80 aa2.99□□□□□ -1.93
APP-217ENST00000548570 Q6ZRX8 168 aa2.99□□□□□ -1.93
APP-217ENST00000548570 FAM19A1Q7Z5A9 133 aa2.99□□□□□ -1.93
APP-217ENST00000548570 COPS9Q8WXC6 57 aa2.99□□□□□ -1.93
APP-217ENST00000548570 FAM218AQ96MZ4 157 aa2.99□□□□□ -1.93
APP-217ENST00000548570 NHP2Q9NX24 153 aaKnown RBP2.99□□□□□ -1.93
APP-217ENST00000548570 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms