RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 HIST1H2BBP33778 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BDP58876 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BCP62807 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST2H2BEQ16778 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.98□□□□□ -1.29
GCN1-204ENST00000548132 Q8N377 158 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BHQ93079 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BNQ99877 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 HIST1H2BMQ99879 126 aa6.98□□□□□ -1.29
GCN1-204ENST00000548132 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
GCN1-204ENST00000548132 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
GCN1-204ENST00000548132 SYS1-DBNDD2H3BUS1 97 aa6.96□□□□□ -1.3
GCN1-204ENST00000548132 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.3
GCN1-204ENST00000548132 LINC01545Q5VT33 79 aa6.96□□□□□ -1.3
GCN1-204ENST00000548132 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.3
GCN1-204ENST00000548132 TTTY13Q9BZ97 58 aa6.96□□□□□ -1.3
GCN1-204ENST00000548132 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
GCN1-204ENST00000548132 SPINK1P00995 79 aa6.95□□□□□ -1.3
GCN1-204ENST00000548132 MIEN1Q9BRT3 115 aa6.95□□□□□ -1.3
GCN1-204ENST00000548132 ASB16-AS1Q495Z4 193 aa6.93□□□□□ -1.3
GCN1-204ENST00000548132 LINC00308Q8TCZ7 52 aa6.93□□□□□ -1.3
GCN1-204ENST00000548132 S100A7L2Q5SY68 101 aa6.92□□□□□ -1.3
GCN1-204ENST00000548132 SPANXCQ9NY87 97 aa6.92□□□□□ -1.3
GCN1-204ENST00000548132 TIMM17BO60830 172 aa6.91□□□□□ -1.3
GCN1-204ENST00000548132 S100A12P80511 92 aa6.91□□□□□ -1.3
GCN1-204ENST00000548132 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
GCN1-204ENST00000548132 SSBP3-AS1Q7Z2R9 100 aa6.91□□□□□ -1.3
GCN1-204ENST00000548132 C3orf79P0CE67 100 aa6.9□□□□□ -1.3
GCN1-204ENST00000548132 SPRR1BP22528 89 aa6.9□□□□□ -1.3
GCN1-204ENST00000548132 COA6Q5JTJ3 125 aaKnown RBP6.89□□□□□ -1.31
GCN1-204ENST00000548132 ZNF815PA8K554 130 aa6.88□□□□□ -1.31
GCN1-204ENST00000548132 XP32Q5T750 250 aa6.88□□□□□ -1.31
GCN1-204ENST00000548132 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
GCN1-204ENST00000548132 PET117Q6UWS5 81 aa6.88□□□□□ -1.31
GCN1-204ENST00000548132 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
GCN1-204ENST00000548132 JOSD1Q15040 202 aaPredicted RBP6.87□□□□□ -1.31
GCN1-204ENST00000548132 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
GCN1-204ENST00000548132 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
GCN1-204ENST00000548132 SLC25A20O43772 301 aa6.86□□□□□ -1.31
GCN1-204ENST00000548132 C5orf52A6NGY3 159 aa6.85□□□□□ -1.31
GCN1-204ENST00000548132 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
GCN1-204ENST00000548132 C6orf99Q4VX62 202 aa6.84□□□□□ -1.31
GCN1-204ENST00000548132 LINC01547P58512 204 aaPredicted RBP6.83□□□□□ -1.32
GCN1-204ENST00000548132 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
GCN1-204ENST00000548132 OR13C6PQ8NH95 151 aa6.83□□□□□ -1.32
GCN1-204ENST00000548132 KRTDAPP60985 99 aa6.82□□□□□ -1.32
GCN1-204ENST00000548132 DHRS4-AS1Q9P1J3 65 aa6.82□□□□□ -1.32
GCN1-204ENST00000548132 COX7BP24311 80 aa6.81□□□□□ -1.32
GCN1-204ENST00000548132 SMIM29Q86T20 159 aa6.81□□□□□ -1.32
GCN1-204ENST00000548132 PCP2Q8IVA1 136 aa6.81□□□□□ -1.32
GCN1-204ENST00000548132 ATOH7Q8N100 152 aa6.81□□□□□ -1.32
GCN1-204ENST00000548132 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
GCN1-204ENST00000548132 CBY1Q9Y3M2 126 aa6.8□□□□□ -1.32
GCN1-204ENST00000548132 IGLV5-48A0A075B6I7 105 aa6.79□□□□□ -1.32
GCN1-204ENST00000548132 Q1RN00 199 aa6.79□□□□□ -1.32
GCN1-204ENST00000548132 HRCT1Q6UXD1 115 aa6.78□□□□□ -1.32
GCN1-204ENST00000548132 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
GCN1-204ENST00000548132 TRBV7-6A0A0J9YX20 115 aa6.77□□□□□ -1.33
GCN1-204ENST00000548132 HINT1P49773 126 aaPredicted RBP6.77□□□□□ -1.33
GCN1-204ENST00000548132 LINC00518Q8N0U6 118 aa6.77□□□□□ -1.33
GCN1-204ENST00000548132 SCGB1D4Q6XE38 83 aa6.76□□□□□ -1.33
GCN1-204ENST00000548132 LIMD2Q9BT23 127 aa6.76□□□□□ -1.33
GCN1-204ENST00000548132 IFITM1P13164 125 aa6.75□□□□□ -1.33
GCN1-204ENST00000548132 LAMTOR3Q9UHA4 124 aa6.75□□□□□ -1.33
GCN1-204ENST00000548132 FLGP20930 4061 aaPredicted RBP6.75□□□□□ -1.33
GCN1-204ENST00000548132 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
GCN1-204ENST00000548132 A0A1B0GWB2 263 aa6.74□□□□□ -1.33
GCN1-204ENST00000548132 C20orf202A1L168 122 aa6.74□□□□□ -1.33
GCN1-204ENST00000548132 CD164Q04900 197 aa6.74□□□□□ -1.33
GCN1-204ENST00000548132 SLC25A34Q6PIV7 304 aa6.74□□□□□ -1.33
GCN1-204ENST00000548132 MUSTN1Q8IVN3 82 aa6.74□□□□□ -1.33
GCN1-204ENST00000548132 TEX49A0A1B0GTD5 131 aa6.73□□□□□ -1.33
GCN1-204ENST00000548132 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
GCN1-204ENST00000548132 Q5XG85 94 aa6.73□□□□□ -1.33
GCN1-204ENST00000548132 DEFB105AQ8NG35 78 aa6.73□□□□□ -1.33
GCN1-204ENST00000548132 H7C2G1 150 aa6.72□□□□□ -1.33
GCN1-204ENST00000548132 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
GCN1-204ENST00000548132 Q6ZVH6 145 aa6.72□□□□□ -1.33
GCN1-204ENST00000548132 HIST3H2BBQ8N257 126 aa6.72□□□□□ -1.33
GCN1-204ENST00000548132 SMIM11BQ8TCY0 68 aa6.72□□□□□ -1.33
GCN1-204ENST00000548132 C1orf195Q5TG92 126 aa6.71□□□□□ -1.34
GCN1-204ENST00000548132 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
GCN1-204ENST00000548132 PRO1933Q9H354 126 aa6.71□□□□□ -1.34
GCN1-204ENST00000548132 A6NDN8 102 aa6.7□□□□□ -1.34
GCN1-204ENST00000548132 MT1HP80294 61 aa6.7□□□□□ -1.34
GCN1-204ENST00000548132 TAL2Q16559 108 aa6.7□□□□□ -1.34
GCN1-204ENST00000548132 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
GCN1-204ENST00000548132 COPS9Q8WXC6 57 aa6.68□□□□□ -1.34
GCN1-204ENST00000548132 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
GCN1-204ENST00000548132 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
GCN1-204ENST00000548132 A4D1N5 150 aa6.65□□□□□ -1.34
GCN1-204ENST00000548132 AKR1D1P51857 326 aa6.65□□□□□ -1.34
GCN1-204ENST00000548132 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
GCN1-204ENST00000548132 SNRPEP62304 92 aaKnown RBP6.64□□□□□ -1.35
GCN1-204ENST00000548132 LINC00575Q6W349 94 aa6.64□□□□□ -1.35
GCN1-204ENST00000548132 Q6ZQY7 126 aa6.63□□□□□ -1.35
GCN1-204ENST00000548132 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
GCN1-204ENST00000548132 IGFL1Q6UW32 110 aa6.61□□□□□ -1.35
GCN1-204ENST00000548132 C12orf57Q99622 126 aa6.61□□□□□ -1.35
GCN1-204ENST00000548132 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms