RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 IGKV2-24A0A0C4DH68 120 aa1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 A8MUN3 132 aa1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 SPINK13Q1W4C9 94 aa1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 FDCSPQ8NFU4 85 aa1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 ZCCHC13Q8WW36 166 aaKnown RBP1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 LINC00474Q9P2X8 69 aa1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 FAM215AQ9Y5M1 114 aa1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 ANKHD1Q8IWZ3 2542 aaKnown RBP1.43□□□□□ -2.18
RAB3IP-209ENST00000547055 TNRC18O15417 2968 aaPredicted RBP1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 CADP27708 2225 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 HTN1P15515 57 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 C1orf137Q5JT78 98 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 SOSTDC1Q6X4U4 206 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 DEFB119Q8N690 84 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 Q8NAQ8 132 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 ZNF706Q9Y5V0 76 aaPredicted RBP1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 ICE1Q9Y2F5 2266 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 EP400Q96L91 3159 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 CACNA1HO95180 2353 aa1.42□□□□□ -2.18
RAB3IP-209ENST00000547055 A6NN06 94 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 A8MWP4 228 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 G3V318 75 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 LYNX1P0DP58 116 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 COX6A2Q02221 97 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 DEFB112Q30KQ8 113 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 LELP1Q5T871 98 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 Q5VV11 94 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 Q6ZRX8 168 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 LINC00304Q8N9R0 145 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 DMAC1Q96GE9 116 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 DNAH12Q6ZR08 3092 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 CUL9Q8IWT3 2517 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 MUC4Q99102 2169 aa1.41□□□□□ -2.18
RAB3IP-209ENST00000547055 CEP250Q9BV73 2442 aa1.4□□□□□ -2.18
RAB3IP-209ENST00000547055 SPTAN1Q13813 2472 aaKnown RBP1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 IGLV10-54A0A075B6I4 117 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 A0A1B0GU33 70 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 A0A1B0GU69 56 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 LYNX1G3V0Z9 82 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 SPART-AS1P0CW21 52 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 COX6B2Q6YFQ2 88 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 CYSTM1Q9H1C7 97 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 ROS1P08922 2347 aa1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 PTPRZ1P23471 2315 aaPredicted RBP1.4□□□□□ -2.19
RAB3IP-209ENST00000547055 APC2O95996 2303 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 SRCAPQ6ZRS2 3230 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 TFF1P04155 84 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 DEFB132Q7Z7B7 95 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 COA5Q86WW8 74 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 NOP10Q9NPE3 64 aaKnown RBP1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 R4GN34 69 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 PIEZO2Q9H5I5 2752 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 TRANK1O15050 2925 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 SPTBN2O15020 2390 aa1.39□□□□□ -2.19
RAB3IP-209ENST00000547055 TECTAO75443 2155 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 PTPRQQ9UMZ3 2332 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 IGKV3-7A0A075B6H7 116 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 A0A087WSZ3 146 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 HRES1P13985 223 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 SPATA8Q6RVD6 105 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 ADM2Q7Z4H4 148 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 C9orf163Q8N9P6 203 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 PRRC2CQ9Y520 2896 aaKnown RBP1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 PCNTO95613 3336 aa1.38□□□□□ -2.19
RAB3IP-209ENST00000547055 COL6A6A6NMZ7 2263 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 SPTA1P02549 2419 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 AKAP6Q13023 2319 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 A0A096LNT2 108 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 SPRR1AP35321 89 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 LINC00313P59037 77 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 MIR22HGQ0VDD5 57 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 CCL19Q99731 98 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 C6orf48Q9UBA6 75 aa1.37□□□□□ -2.19
RAB3IP-209ENST00000547055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.37□□□□□ -2.197e-17■■■■■ 33.5
RAB3IP-209ENST00000547055 PKDREJQ9NTG1 2253 aa1.36□□□□□ -2.19
RAB3IP-209ENST00000547055 IGKV3OR2-268A0A0C4DH90 116 aa1.36□□□□□ -2.19
RAB3IP-209ENST00000547055 CEP290O15078 2479 aa1.36□□□□□ -2.19
RAB3IP-209ENST00000547055 P0C880 135 aa1.36□□□□□ -2.19
RAB3IP-209ENST00000547055 SPRR1BP22528 89 aa1.36□□□□□ -2.19
RAB3IP-209ENST00000547055 PLAC8Q9NZF1 115 aa1.36□□□□□ -2.19
RAB3IP-209ENST00000547055 GOLGB1Q14789 3259 aaKnown RBP1.36□□□□□ -2.19
RAB3IP-209ENST00000547055 SORL1Q92673 2214 aa1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 IGLV1-51P01701 117 aa1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 DEFB113Q30KQ7 82 aa1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 FAM229BQ4G0N7 80 aa1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 LINC01556Q5JQF7 62 aa1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 UNQ6190/PRO20217Q6UXQ8 127 aa1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 WFDC10BQ8IUB3 73 aa1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 CNOT1A5YKK6 2376 aaKnown RBP1.35□□□□□ -2.19
RAB3IP-209ENST00000547055 ACACAQ13085 2346 aa1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 WNK1Q9H4A3 2382 aa1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 K7EQZ3 153 aa1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 DEFB130BP0DP73 79 aa1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 DEFB130AP0DP74 79 aa1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 ROMO1P60602 79 aa1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 KRTAP25-1Q3LHN0 102 aa1.34□□□□□ -2.19
RAB3IP-209ENST00000547055 DEFB105AQ8NG35 78 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms