RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PRLHP81277 87 aa8.68□□□□□ -1.02
DDX54-203ENST00000546869 VAMP8Q9BV40 100 aa8.68□□□□□ -1.02
DDX54-203ENST00000546869 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
DDX54-203ENST00000546869 SPATA45Q537H7 98 aa8.67□□□□□ -1.02
DDX54-203ENST00000546869 PYY3Q5JQD4 70 aa8.67□□□□□ -1.02
DDX54-203ENST00000546869 ETDCA0A1B0GVM5 59 aa8.66□□□□□ -1.02
DDX54-203ENST00000546869 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
DDX54-203ENST00000546869 B5MCH6 92 aa8.65□□□□□ -1.02
DDX54-203ENST00000546869 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
DDX54-203ENST00000546869 HIGD1BQ9P298 99 aa8.65□□□□□ -1.02
DDX54-203ENST00000546869 RPL13AP40429 203 aaKnown RBP8.64□□□□□ -1.03
DDX54-203ENST00000546869 OR13C6PQ8NH95 151 aa8.64□□□□□ -1.03
DDX54-203ENST00000546869 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
DDX54-203ENST00000546869 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
DDX54-203ENST00000546869 Q6ZRX8 168 aa8.63□□□□□ -1.03
DDX54-203ENST00000546869 TRAV13-2A0A0B4J235 113 aa8.62□□□□□ -1.03
DDX54-203ENST00000546869 HINT1P49773 126 aaPredicted RBP8.62□□□□□ -1.03
DDX54-203ENST00000546869 FAM229BQ4G0N7 80 aa8.62□□□□□ -1.03
DDX54-203ENST00000546869 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
DDX54-203ENST00000546869 HIGD2AQ9BW72 106 aa8.62□□□□□ -1.03
DDX54-203ENST00000546869 SMCR5Q8TEV8 140 aa8.61□□□□□ -1.03
DDX54-203ENST00000546869 TRBV7-6A0A0J9YX20 115 aa8.6□□□□□ -1.03
DDX54-203ENST00000546869 CRYGAP11844 174 aa8.6□□□□□ -1.03
DDX54-203ENST00000546869 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
DDX54-203ENST00000546869 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
DDX54-203ENST00000546869 A4D1N5 150 aa8.59□□□□□ -1.03
DDX54-203ENST00000546869 SPRR4Q96PI1 79 aa8.59□□□□□ -1.03
DDX54-203ENST00000546869 HERC1Q15751 4861 aa8.59□□□□□ -1.03
DDX54-203ENST00000546869 A6NDN8 102 aa8.58□□□□□ -1.04
DDX54-203ENST00000546869 TAL2Q16559 108 aa8.58□□□□□ -1.04
DDX54-203ENST00000546869 C2orf91Q6ZV80 131 aa8.58□□□□□ -1.04
DDX54-203ENST00000546869 Q9BRP9 147 aa8.58□□□□□ -1.04
DDX54-203ENST00000546869 TNXBP22105 4242 aa8.58□□□□□ -1.04
DDX54-203ENST00000546869 A0A087X002 238 aa8.57□□□□□ -1.04
DDX54-203ENST00000546869 ELOF1P60002 83 aaKnown RBP8.56□□□□□ -1.04
DDX54-203ENST00000546869 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
DDX54-203ENST00000546869 DHRS4-AS1Q9P1J3 65 aa8.56□□□□□ -1.04
DDX54-203ENST00000546869 C6orf99Q4VX62 202 aa8.55□□□□□ -1.04
DDX54-203ENST00000546869 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
DDX54-203ENST00000546869 COX7BP24311 80 aa8.54□□□□□ -1.04
DDX54-203ENST00000546869 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
DDX54-203ENST00000546869 A0A1B0GWB2 263 aa8.53□□□□□ -1.04
DDX54-203ENST00000546869 KRTAP13-2Q52LG2 175 aa8.53□□□□□ -1.04
DDX54-203ENST00000546869 TYMSOSQ8TAI1 123 aa8.52□□□□□ -1.05
DDX54-203ENST00000546869 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
DDX54-203ENST00000546869 CEND1Q8N111 149 aa8.51□□□□□ -1.05
DDX54-203ENST00000546869 UQCR10Q9UDW1 63 aa8.51□□□□□ -1.05
DDX54-203ENST00000546869 CFC1BP0CG36 223 aa8.5□□□□□ -1.05
DDX54-203ENST00000546869 CFC1P0CG37 223 aa8.5□□□□□ -1.05
DDX54-203ENST00000546869 CTAG1AP78358 180 aa8.5□□□□□ -1.05
DDX54-203ENST00000546869 A0A0B4J2C4 111 aa8.49□□□□□ -1.05
DDX54-203ENST00000546869 VAMP3Q15836 100 aa8.49□□□□□ -1.05
DDX54-203ENST00000546869 GAGE2AQ6NT46 116 aa8.49□□□□□ -1.05
DDX54-203ENST00000546869 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
DDX54-203ENST00000546869 A6NJY4 79 aa8.48□□□□□ -1.05
DDX54-203ENST00000546869 SMIM6P0DI80 62 aa8.48□□□□□ -1.05
DDX54-203ENST00000546869 SPRR1BP22528 89 aa8.48□□□□□ -1.05
DDX54-203ENST00000546869 HSD52Q0P140 79 aa8.47□□□□□ -1.05
DDX54-203ENST00000546869 NHP2Q9NX24 153 aaKnown RBP8.47□□□□□ -1.05
DDX54-203ENST00000546869 RAB37Q96AX2 223 aa8.46□□□□□ -1.06
DDX54-203ENST00000546869 C12orf57Q99622 126 aa8.46□□□□□ -1.06
DDX54-203ENST00000546869 BVES-AS1Q5T3Y7 98 aa8.45□□□□□ -1.06
DDX54-203ENST00000546869 C3orf22Q8N5N4 141 aa8.45□□□□□ -1.06
DDX54-203ENST00000546869 ST20-AS1Q8NBB2 130 aa8.45□□□□□ -1.06
DDX54-203ENST00000546869 LOC105371267A0A1B0GV96 52 aa8.44□□□□□ -1.06
DDX54-203ENST00000546869 FXYD2P54710 66 aa8.44□□□□□ -1.06
DDX54-203ENST00000546869 SSBP3-AS1Q7Z2R9 100 aa8.44□□□□□ -1.06
DDX54-203ENST00000546869 LINC00575Q6W349 94 aa8.43□□□□□ -1.06
DDX54-203ENST00000546869 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
DDX54-203ENST00000546869 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
DDX54-203ENST00000546869 SLC25A20O43772 301 aa8.42□□□□□ -1.06
DDX54-203ENST00000546869 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
DDX54-203ENST00000546869 IGLV5-48A0A075B6I7 105 aa8.41□□□□□ -1.06
DDX54-203ENST00000546869 TEX49A0A1B0GTD5 131 aa8.41□□□□□ -1.06
DDX54-203ENST00000546869 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
DDX54-203ENST00000546869 H0YGX0 51 aa8.39□□□□□ -1.07
DDX54-203ENST00000546869 LINC01547P58512 204 aaPredicted RBP8.39□□□□□ -1.07
DDX54-203ENST00000546869 HMCN2Q8NDA2 5059 aa8.38□□□□□ -1.07
DDX54-203ENST00000546869 IGLV9-49A0A0B4J1Y8 123 aa8.38□□□□□ -1.07
DDX54-203ENST00000546869 LAMTOR3Q9UHA4 124 aa8.38□□□□□ -1.07
DDX54-203ENST00000546869 H7C2G1 150 aa8.37□□□□□ -1.07
DDX54-203ENST00000546869 Q8NBF4 154 aa8.37□□□□□ -1.07
DDX54-203ENST00000546869 PRO1933Q9H354 126 aa8.37□□□□□ -1.07
DDX54-203ENST00000546869 TSPAN13O95857 204 aa8.36□□□□□ -1.07
DDX54-203ENST00000546869 MOBPQ13875 183 aa8.36□□□□□ -1.07
DDX54-203ENST00000546869 C4orf48Q5BLP8 95 aa8.36□□□□□ -1.07
DDX54-203ENST00000546869 SPINK1P00995 79 aa8.35□□□□□ -1.07
DDX54-203ENST00000546869 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.35□□□□□ -1.07
DDX54-203ENST00000546869 SMIM29Q86T20 159 aa8.35□□□□□ -1.07
DDX54-203ENST00000546869 DEFB105AQ8NG35 78 aa8.35□□□□□ -1.07
DDX54-203ENST00000546869 A0A1B0GX51 115 aa8.34□□□□□ -1.07
DDX54-203ENST00000546869 SNCGO76070 127 aa8.34□□□□□ -1.07
DDX54-203ENST00000546869 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
DDX54-203ENST00000546869 Q1RN00 199 aa8.34□□□□□ -1.07
DDX54-203ENST00000546869 Q8N377 158 aa8.34□□□□□ -1.07
DDX54-203ENST00000546869 C9orf153Q5TBE3 101 aa8.33□□□□□ -1.08
DDX54-203ENST00000546869 Q6ZQY7 126 aa8.33□□□□□ -1.08
DDX54-203ENST00000546869 PPDPFLQ8WWR9 84 aa8.33□□□□□ -1.08
DDX54-203ENST00000546869 TSTD3H0UI37 97 aa8.31□□□□□ -1.08
DDX54-203ENST00000546869 OCIAD2Q56VL3 154 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms