RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-221	ENST00000545367	HSPB8	Q9UJY1	196 aa		4.71	□□□□□ -1.66
NPIPB4-221	ENST00000545367	SYNE2	Q8WXH0	6885 aa	Known RBP	4.71	□□□□□ -1.66
NPIPB4-221	ENST00000545367	PCOTH	Q58A44	107 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367		Q6ZN92	141 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	TEX43	Q6ZNM6	134 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	SMIM29	Q86T20	159 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	HIST3H2BB	Q8N257	126 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	FAM19A2	Q8N3H0	131 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	TMEM141	Q96I45	108 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	TMEM126A	Q9H061	195 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	CYSLTR1	Q9Y271	337 aa		4.7	□□□□□ -1.66
NPIPB4-221	ENST00000545367	LEPROTL1	O95214	131 aa		4.69	□□□□□ -1.66
NPIPB4-221	ENST00000545367	PLEKHB2	Q96CS7	222 aa		4.69	□□□□□ -1.66
NPIPB4-221	ENST00000545367	SPRR4	Q96PI1	79 aa		4.69	□□□□□ -1.66
NPIPB4-221	ENST00000545367	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.69	□□□□□ -1.66
NPIPB4-221	ENST00000545367	TOMM6	Q96B49	74 aa		4.68	□□□□□ -1.66
NPIPB4-221	ENST00000545367	TIMM17A	Q99595	171 aa		4.68	□□□□□ -1.66
NPIPB4-221	ENST00000545367	HIST1H2BL	Q99880	126 aa		4.68	□□□□□ -1.66
NPIPB4-221	ENST00000545367	C20orf202	A1L168	122 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367		M0R378	163 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	SPINK1	P00995	79 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	FABP4	P15090	132 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	CXCL5	P42830	114 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	C2orf66	Q6UXQ4	117 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	COX6B2	Q6YFQ2	88 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367		Q8N377	158 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	MAP1LC3C	Q9BXW4	147 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	PYGO1	Q9Y3Y4	419 aa		4.67	□□□□□ -1.66
NPIPB4-221	ENST00000545367	PDZD11	Q5EBL8	140 aa		4.66	□□□□□ -1.66
NPIPB4-221	ENST00000545367	SCGB3A1	Q96QR1	104 aa		4.66	□□□□□ -1.66
NPIPB4-221	ENST00000545367	CDKN2A-AS1	Q9UH64	79 aa		4.66	□□□□□ -1.66
NPIPB4-221	ENST00000545367	IFI27L1	Q96BM0	104 aa		4.65	□□□□□ -1.67
NPIPB4-221	ENST00000545367	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.65	□□□□□ -1.67
NPIPB4-221	ENST00000545367		A0A096LNJ9	63 aa		4.64	□□□□□ -1.67
NPIPB4-221	ENST00000545367	TRAV12-1	A0A0B4J245	112 aa		4.64	□□□□□ -1.67
NPIPB4-221	ENST00000545367	SMIM6	P0DI80	62 aa		4.64	□□□□□ -1.67
NPIPB4-221	ENST00000545367	MOBP	Q13875	183 aa		4.64	□□□□□ -1.67
NPIPB4-221	ENST00000545367	PMCHL1	Q16048	86 aa		4.64	□□□□□ -1.67
NPIPB4-221	ENST00000545367	ADAMTSL4-AS1	Q5T5F5	129 aa		4.64	□□□□□ -1.67
NPIPB4-221	ENST00000545367	IGIP	A6NJ69	53 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	SYS1-DBNDD2	H3BUS1	97 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	SLC25A20	O43772	301 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	PLN	P26678	52 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	KRTDAP	P60985	99 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	SEC11A	P67812	179 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	PMVK	Q15126	192 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367		Q8N9P0	234 aa	Predicted RBP	4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	COX7B2	Q8TF08	81 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	OCR1	Q9BZK8	76 aa		4.63	□□□□□ -1.67
NPIPB4-221	ENST00000545367	LOC105371267	A0A1B0GV96	52 aa		4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367		A0A1B0GWB2	263 aa		4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367	C9orf92	A6NGG3	77 aa		4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367	C3orf79	P0CE67	100 aa		4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367	RPS29	P62273	56 aa	Known RBP	4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367	HERVK_113	P63121	156 aa		4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367	JOSD1	Q15040	202 aa	Predicted RBP	4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367	LINC01545	Q5VT33	79 aa		4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367	AMELX	Q99217	191 aa		4.62	□□□□□ -1.67
NPIPB4-221	ENST00000545367		Q8NDZ9	215 aa		4.61	□□□□□ -1.67
NPIPB4-221	ENST00000545367	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	DPM2	O94777	84 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	PFN2	P35080	140 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	S100A12	P80511	92 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	VAMP3	Q15836	100 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	FAM19A3	Q7Z5A8	133 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	MTURN	Q8N3F0	131 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	CST9L	Q9H4G1	147 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	SND1-IT1	Q9HBX3	110 aa		4.6	□□□□□ -1.67
NPIPB4-221	ENST00000545367	SPINK8	P0C7L1	97 aa		4.59	□□□□□ -1.67
NPIPB4-221	ENST00000545367	NDUFV3	P56181	108 aa	Known RBP	4.59	□□□□□ -1.67
NPIPB4-221	ENST00000545367	TINCR	A0A1B0GVN0	87 aa		4.58	□□□□□ -1.68
NPIPB4-221	ENST00000545367		H3BRM9	83 aa		4.58	□□□□□ -1.68
NPIPB4-221	ENST00000545367	IGKC	P01834	107 aa		4.58	□□□□□ -1.68
NPIPB4-221	ENST00000545367	IGKV2-30	P06310	120 aa		4.58	□□□□□ -1.68
NPIPB4-221	ENST00000545367	IGLC3	P0DOY3	106 aa		4.58	□□□□□ -1.68
NPIPB4-221	ENST00000545367	HERVK_113	P61574	105 aa		4.58	□□□□□ -1.68
NPIPB4-221	ENST00000545367	LINC00483	Q53H64	154 aa		4.58	□□□□□ -1.68
NPIPB4-221	ENST00000545367	C11orf86	A6NJI1	115 aa		4.57	□□□□□ -1.68
NPIPB4-221	ENST00000545367	PYY3	Q5JQD4	70 aa		4.57	□□□□□ -1.68
NPIPB4-221	ENST00000545367	VAMP8	Q9BV40	100 aa		4.57	□□□□□ -1.68
NPIPB4-221	ENST00000545367		E9PLD3	99 aa		4.56	□□□□□ -1.68
NPIPB4-221	ENST00000545367	CFC1	P0CG37	223 aa		4.56	□□□□□ -1.68
NPIPB4-221	ENST00000545367	C9orf153	Q5TBE3	101 aa		4.56	□□□□□ -1.68
NPIPB4-221	ENST00000545367	NOTCH2NL	Q7Z3S9	236 aa		4.56	□□□□□ -1.68
NPIPB4-221	ENST00000545367	SMCR5	Q8TEV8	140 aa		4.56	□□□□□ -1.68
NPIPB4-221	ENST00000545367	SFTA2	Q6UW10	78 aa		4.55	□□□□□ -1.68
NPIPB4-221	ENST00000545367	C12orf57	Q99622	126 aa		4.55	□□□□□ -1.68
NPIPB4-221	ENST00000545367	ERG28	Q9UKR5	140 aa		4.55	□□□□□ -1.68
NPIPB4-221	ENST00000545367	ETDC	A0A1B0GVM5	59 aa		4.54	□□□□□ -1.68
NPIPB4-221	ENST00000545367	TMEM170B	Q5T4T1	132 aa		4.54	□□□□□ -1.68
NPIPB4-221	ENST00000545367	TSTD3	H0UI37	97 aa		4.53	□□□□□ -1.68
NPIPB4-221	ENST00000545367	NCR3	O14931	201 aa		4.53	□□□□□ -1.68
NPIPB4-221	ENST00000545367	NMU	P48645	174 aa		4.53	□□□□□ -1.68
NPIPB4-221	ENST00000545367		Q6Q795	121 aa		4.53	□□□□□ -1.68
NPIPB4-221	ENST00000545367	ZNF625	Q96I27	306 aa	Predicted RBP	4.53	□□□□□ -1.68
NPIPB4-221	ENST00000545367	PMCHL2	Q9BQD1	86 aa		4.53	□□□□□ -1.68
NPIPB4-221	ENST00000545367	TMEM223	A0PJW6	202 aa		4.52	□□□□□ -1.69
NPIPB4-221	ENST00000545367	IGLV6-57	P01721	117 aa		4.52	□□□□□ -1.69
NPIPB4-221	ENST00000545367	ZNF22	P17026	224 aa	Predicted RBP	4.52	□□□□□ -1.69
NPIPB4-221	ENST00000545367	SPATA45	Q537H7	98 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms