RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 SPANXCQ9NY87 97 aa6.65□□□□□ -1.34
YBX3-216ENST00000544622 C20orf202A1L168 122 aa6.64□□□□□ -1.35
YBX3-216ENST00000544622 S100A12P80511 92 aa6.64□□□□□ -1.35
YBX3-216ENST00000544622 Q9BRP9 147 aa6.64□□□□□ -1.35
YBX3-216ENST00000544622 AKR1D1P51857 326 aa6.63□□□□□ -1.35
YBX3-216ENST00000544622 CTAG1AP78358 180 aa6.63□□□□□ -1.35
YBX3-216ENST00000544622 LINC00483Q53H64 154 aa6.63□□□□□ -1.35
YBX3-216ENST00000544622 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
YBX3-216ENST00000544622 Q6ZRX8 168 aa6.63□□□□□ -1.35
YBX3-216ENST00000544622 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
YBX3-216ENST00000544622 TRAV23DV6A0A075B6W5 121 aa6.62□□□□□ -1.35
YBX3-216ENST00000544622 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
YBX3-216ENST00000544622 TSPAN13O95857 204 aa6.62□□□□□ -1.35
YBX3-216ENST00000544622 C3orf22Q8N5N4 141 aa6.62□□□□□ -1.35
YBX3-216ENST00000544622 SPANXDQ9BXN6 97 aa6.62□□□□□ -1.35
YBX3-216ENST00000544622 PPDPFQ9H3Y8 114 aa6.62□□□□□ -1.35
YBX3-216ENST00000544622 ZNF706Q9Y5V0 76 aaPredicted RBP6.62□□□□□ -1.35
YBX3-216ENST00000544622 ZNF73O43830 326 aaPredicted RBP6.61□□□□□ -1.35
YBX3-216ENST00000544622 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
YBX3-216ENST00000544622 LINC00304Q8N9R0 145 aa6.61□□□□□ -1.35
YBX3-216ENST00000544622 SNRPEP62304 92 aaKnown RBP6.6□□□□□ -1.35
YBX3-216ENST00000544622 S100A2P29034 98 aa6.59□□□□□ -1.35
YBX3-216ENST00000544622 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
YBX3-216ENST00000544622 Q6ZVH6 145 aa6.59□□□□□ -1.35
YBX3-216ENST00000544622 IFITM1P13164 125 aa6.58□□□□□ -1.36
YBX3-216ENST00000544622 JOSD1Q15040 202 aaPredicted RBP6.58□□□□□ -1.36
YBX3-216ENST00000544622 PRR4Q16378 134 aa6.58□□□□□ -1.36
YBX3-216ENST00000544622 LINC00518Q8N0U6 118 aa6.58□□□□□ -1.36
YBX3-216ENST00000544622 C5orf52A6NGY3 159 aa6.57□□□□□ -1.36
YBX3-216ENST00000544622 S100A6P06703 90 aa6.57□□□□□ -1.36
YBX3-216ENST00000544622 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
YBX3-216ENST00000544622 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
YBX3-216ENST00000544622 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
YBX3-216ENST00000544622 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
YBX3-216ENST00000544622 OR13C6PQ8NH95 151 aa6.56□□□□□ -1.36
YBX3-216ENST00000544622 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
YBX3-216ENST00000544622 HINT1P49773 126 aaPredicted RBP6.54□□□□□ -1.36
YBX3-216ENST00000544622 ELOF1P60002 83 aaKnown RBP6.54□□□□□ -1.36
YBX3-216ENST00000544622 SPRR1BP22528 89 aa6.53□□□□□ -1.36
YBX3-216ENST00000544622 SSBP3-AS1Q7Z2R9 100 aa6.53□□□□□ -1.36
YBX3-216ENST00000544622 ST20-AS1Q8NBB2 130 aa6.53□□□□□ -1.36
YBX3-216ENST00000544622 Q8NBF4 154 aa6.53□□□□□ -1.36
YBX3-216ENST00000544622 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
YBX3-216ENST00000544622 TMA7Q9Y2S6 64 aaKnown RBP6.53□□□□□ -1.36
YBX3-216ENST00000544622 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
YBX3-216ENST00000544622 C6orf99Q4VX62 202 aa6.52□□□□□ -1.37
YBX3-216ENST00000544622 DHRS4-AS1Q9P1J3 65 aa6.52□□□□□ -1.37
YBX3-216ENST00000544622 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
YBX3-216ENST00000544622 HSBP1L1C9JCN9 74 aa6.51□□□□□ -1.37
YBX3-216ENST00000544622 IGLV9-49A0A0B4J1Y8 123 aa6.5□□□□□ -1.37
YBX3-216ENST00000544622 SPINK1P00995 79 aa6.5□□□□□ -1.37
YBX3-216ENST00000544622 MOBPQ13875 183 aa6.5□□□□□ -1.37
YBX3-216ENST00000544622 A6NDN8 102 aa6.49□□□□□ -1.37
YBX3-216ENST00000544622 SCGB1D1O95968 90 aa6.49□□□□□ -1.37
YBX3-216ENST00000544622 COX7BP24311 80 aa6.49□□□□□ -1.37
YBX3-216ENST00000544622 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
YBX3-216ENST00000544622 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
YBX3-216ENST00000544622 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
YBX3-216ENST00000544622 TPRXLQ17RH7 258 aa6.48□□□□□ -1.37
YBX3-216ENST00000544622 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
YBX3-216ENST00000544622 DLEU1O43261 78 aa6.47□□□□□ -1.37
YBX3-216ENST00000544622 COX8AP10176 69 aa6.47□□□□□ -1.37
YBX3-216ENST00000544622 SMIM11BQ8TCY0 68 aa6.47□□□□□ -1.37
YBX3-216ENST00000544622 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.38
YBX3-216ENST00000544622 A4D1N5 150 aa6.46□□□□□ -1.38
YBX3-216ENST00000544622 LINC01547P58512 204 aaPredicted RBP6.46□□□□□ -1.38
YBX3-216ENST00000544622 FP248Q71RG6 208 aaPredicted RBP6.46□□□□□ -1.38
YBX3-216ENST00000544622 Q8N377 158 aa6.45□□□□□ -1.38
YBX3-216ENST00000544622 IGLV5-48A0A075B6I7 105 aa6.44□□□□□ -1.38
YBX3-216ENST00000544622 SLC25A34Q6PIV7 304 aa6.44□□□□□ -1.38
YBX3-216ENST00000544622 SMIM29Q86T20 159 aa6.44□□□□□ -1.38
YBX3-216ENST00000544622 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
YBX3-216ENST00000544622 C9orf153Q5TBE3 101 aa6.43□□□□□ -1.38
YBX3-216ENST00000544622 LAMTOR3Q9UHA4 124 aa6.42□□□□□ -1.38
YBX3-216ENST00000544622 SLC25A20O43772 301 aa6.41□□□□□ -1.38
YBX3-216ENST00000544622 TAL2Q16559 108 aa6.41□□□□□ -1.38
YBX3-216ENST00000544622 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
YBX3-216ENST00000544622 C14orf144Q96I85 54 aa6.41□□□□□ -1.38
YBX3-216ENST00000544622 HIGD1BQ9P298 99 aa6.41□□□□□ -1.38
YBX3-216ENST00000544622 DEFB105AQ8NG35 78 aa6.4□□□□□ -1.38
YBX3-216ENST00000544622 HIST1H4GQ99525 98 aa6.4□□□□□ -1.38
YBX3-216ENST00000544622 CDIP1Q9H305 208 aa6.4□□□□□ -1.38
YBX3-216ENST00000544622 PAM16Q9Y3D7 125 aa6.4□□□□□ -1.38
YBX3-216ENST00000544622 Q1RN00 199 aa6.39□□□□□ -1.39
YBX3-216ENST00000544622 SPATA45Q537H7 98 aa6.39□□□□□ -1.39
YBX3-216ENST00000544622 LINC00575Q6W349 94 aa6.39□□□□□ -1.39
YBX3-216ENST00000544622 NHP2Q9NX24 153 aaKnown RBP6.39□□□□□ -1.39
YBX3-216ENST00000544622 FAT4Q6V0I7 4981 aa6.39□□□□□ -1.39
YBX3-216ENST00000544622 A6NJY4 79 aa6.38□□□□□ -1.39
YBX3-216ENST00000544622 VAMP3Q15836 100 aa6.38□□□□□ -1.39
YBX3-216ENST00000544622 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
YBX3-216ENST00000544622 CFC1BP0CG36 223 aa6.37□□□□□ -1.39
YBX3-216ENST00000544622 CFC1P0CG37 223 aa6.37□□□□□ -1.39
YBX3-216ENST00000544622 CD164Q04900 197 aa6.37□□□□□ -1.39
YBX3-216ENST00000544622 VAMP8Q9BV40 100 aa6.37□□□□□ -1.39
YBX3-216ENST00000544622 PYY3Q5JQD4 70 aa6.36□□□□□ -1.39
YBX3-216ENST00000544622 C12orf57Q99622 126 aa6.36□□□□□ -1.39
YBX3-216ENST00000544622 PRO1933Q9H354 126 aa6.36□□□□□ -1.39
YBX3-216ENST00000544622 hADV29S1A0JD25 119 aa6.35□□□□□ -1.39
YBX3-216ENST00000544622 Q5XG85 94 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 1290 ms