RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 FOXA3P55318 350 aaPredicted RBP3.53□□□□□ -1.84
CPSF7-222ENST00000544585 SPATA45Q537H7 98 aa3.53□□□□□ -1.84
CPSF7-222ENST00000544585 GATD1Q8NB37 220 aa3.53□□□□□ -1.84
CPSF7-222ENST00000544585 CDC42SE2Q9NRR3 84 aa3.53□□□□□ -1.84
CPSF7-222ENST00000544585 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.52□□□□□ -1.85
CPSF7-222ENST00000544585 I3L3M4 83 aa3.52□□□□□ -1.85
CPSF7-222ENST00000544585 IGLC3P0DOY3 106 aa3.52□□□□□ -1.85
CPSF7-222ENST00000544585 OCIAD2Q56VL3 154 aa3.52□□□□□ -1.85
CPSF7-222ENST00000544585 LYZL1Q6UWQ5 148 aa3.52□□□□□ -1.85
CPSF7-222ENST00000544585 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
CPSF7-222ENST00000544585 HSPB8Q9UJY1 196 aa3.52□□□□□ -1.85
CPSF7-222ENST00000544585 A0A1B0GUT8 65 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 SDHAF1A6NFY7 115 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 COX7A2LO14548 114 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 SMAGPQ0VAQ4 97 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 Q5W150 140 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 FAM19A2Q8N3H0 131 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 Q8N9L7 120 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 CST9LQ9H4G1 147 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 ST20Q9HBF5 79 aa3.51□□□□□ -1.85
CPSF7-222ENST00000544585 TRBV6-5A0A0K0K1A5 114 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 SYS1-DBNDD2H3BUS1 97 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 K7ERU9 68 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 LEPROTL1O95214 131 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 BATFQ16520 125 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 PMCHL2Q9BQD1 86 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 TMEM191AQ9H0A3 160 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 MRPL35Q9NZE8 188 aaKnown RBP3.5□□□□□ -1.85
CPSF7-222ENST00000544585 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 LAMTOR2Q9Y2Q5 125 aa3.5□□□□□ -1.85
CPSF7-222ENST00000544585 SCGB1C2P0DMR2 95 aa3.49□□□□□ -1.85
CPSF7-222ENST00000544585 CRYGAP11844 174 aa3.49□□□□□ -1.85
CPSF7-222ENST00000544585 UBE2BP63146 152 aa3.49□□□□□ -1.85
CPSF7-222ENST00000544585 FA2HQ7L5A8 372 aa3.49□□□□□ -1.85
CPSF7-222ENST00000544585 CNFNQ9BYD5 112 aa3.49□□□□□ -1.85
CPSF7-222ENST00000544585 SPANXB1Q9NS25 103 aaPredicted RBP3.49□□□□□ -1.85
CPSF7-222ENST00000544585 NDUFA1O15239 70 aa3.48□□□□□ -1.85
CPSF7-222ENST00000544585 TPRXLQ17RH7 258 aa3.48□□□□□ -1.85
CPSF7-222ENST00000544585 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
CPSF7-222ENST00000544585 KRTAP11-1Q8IUC1 163 aa3.48□□□□□ -1.85
CPSF7-222ENST00000544585 ATOH7Q8N100 152 aa3.48□□□□□ -1.85
CPSF7-222ENST00000544585 RPL39LQ96EH5 51 aaKnown RBP3.48□□□□□ -1.85
CPSF7-222ENST00000544585 SND1-IT1Q9HBX3 110 aa3.48□□□□□ -1.85
CPSF7-222ENST00000544585 POLR2KP53803 58 aaKnown RBP3.47□□□□□ -1.85
CPSF7-222ENST00000544585 SPAG11BQ08648 103 aa3.47□□□□□ -1.85
CPSF7-222ENST00000544585 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
CPSF7-222ENST00000544585 SLC25A34Q6PIV7 304 aa3.47□□□□□ -1.85
CPSF7-222ENST00000544585 FAM19A5Q7Z5A7 132 aaPredicted RBP3.47□□□□□ -1.85
CPSF7-222ENST00000544585 ZNF706Q9Y5V0 76 aaPredicted RBP3.47□□□□□ -1.85
CPSF7-222ENST00000544585 TRAV13-1A0A0B4J241 112 aa3.46□□□□□ -1.86
CPSF7-222ENST00000544585 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
CPSF7-222ENST00000544585 HINT1P49773 126 aaPredicted RBP3.46□□□□□ -1.86
CPSF7-222ENST00000544585 CKS1BP61024 79 aa3.46□□□□□ -1.86
CPSF7-222ENST00000544585 LINC00483Q53H64 154 aa3.46□□□□□ -1.86
CPSF7-222ENST00000544585 FAM104BQ5XKR9 115 aa3.46□□□□□ -1.86
CPSF7-222ENST00000544585 PRELID3AQ96N28 172 aa3.46□□□□□ -1.86
CPSF7-222ENST00000544585 LINC01546A6NGU7 62 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 PPP1R17O96001 155 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 HBDP02042 147 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 COX8AP10176 69 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 FCER1GP30273 86 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 RPL28P46779 137 aaKnown RBP3.45□□□□□ -1.86
CPSF7-222ENST00000544585 BVES-AS1Q5T3Y7 98 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 UNQ6190/PRO20217Q6UXQ8 127 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 TIMM21Q9BVV7 248 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 MAP1LC3AQ9H492 121 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 UBE2D4Q9Y2X8 147 aa3.45□□□□□ -1.86
CPSF7-222ENST00000544585 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
CPSF7-222ENST00000544585 D6R8Y8 96 aa3.44□□□□□ -1.86
CPSF7-222ENST00000544585 CKS2P33552 79 aa3.44□□□□□ -1.86
CPSF7-222ENST00000544585 IFI27P40305 119 aaPredicted RBP3.44□□□□□ -1.86
CPSF7-222ENST00000544585 SEC11AP67812 179 aa3.44□□□□□ -1.86
CPSF7-222ENST00000544585 MRPL51Q4U2R6 128 aaKnown RBP3.44□□□□□ -1.86
CPSF7-222ENST00000544585 AMN1Q8IY45 258 aa3.44□□□□□ -1.86
CPSF7-222ENST00000544585 RETNLBQ9BQ08 111 aa3.44□□□□□ -1.86
CPSF7-222ENST00000544585 NXT2Q9NPJ8 142 aaKnown RBP3.44□□□□□ -1.86
CPSF7-222ENST00000544585 C6orf48Q9UBA6 75 aa3.44□□□□□ -1.86
CPSF7-222ENST00000544585 C8orf87E5RJ46 101 aa3.43□□□□□ -1.86
CPSF7-222ENST00000544585 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
CPSF7-222ENST00000544585 IFI27L1Q96BM0 104 aa3.43□□□□□ -1.86
CPSF7-222ENST00000544585 SIGMAR1Q99720 223 aa3.43□□□□□ -1.86
CPSF7-222ENST00000544585 C22orf24Q9Y442 160 aa3.43□□□□□ -1.86
CPSF7-222ENST00000544585 TAX1BP3O14907 124 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 BCE1O60756 84 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 NPYP01303 97 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 HSD52Q0P140 79 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 FAM229BQ4G0N7 80 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 Q8N8P6 123 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 SS18L2Q9UHA2 77 aa3.42□□□□□ -1.86
CPSF7-222ENST00000544585 IGKV2D-26A0A0A0MRZ7 120 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 TINCRA0A1B0GVN0 87 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 H3BRM9 83 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 C2orf91Q6ZV80 131 aa3.41□□□□□ -1.86
CPSF7-222ENST00000544585 GTF2H5Q6ZYL4 71 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms