RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 IDO2Q6ZQW0 420 aa0.13□□□□□ -2.39
YBX3-214ENST00000544501 SLC25A26Q70HW3 274 aa0.13□□□□□ -2.39
YBX3-214ENST00000544501 TTC9CQ8N5M4 171 aa0.13□□□□□ -2.39
YBX3-214ENST00000544501 OTOSQ8NHW6 89 aa0.13□□□□□ -2.39
YBX3-214ENST00000544501 THEM6Q8WUY1 208 aa0.13□□□□□ -2.39
YBX3-214ENST00000544501 TRAV12-2A0A075B6T6 113 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 TRGV1A0A0A0MS02 117 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 FAM236AA0A1B0GUQ0 79 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 FAM236BA0A1B0GV22 79 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 A0A1B0GWA3 101 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 HIGD1CA8MV81 97 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 APOC4-APOC2K7ER74 178 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 OR2H2O95918 312 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 FAM107AO95990 144 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 HBDP02042 147 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 APOC2P02655 101 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 TCRAP04437 139 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 DBIP07108 87 aaKnown RBP0.12□□□□□ -2.39
YBX3-214ENST00000544501 HIST1H1BP16401 226 aaKnown RBP0.12□□□□□ -2.39
YBX3-214ENST00000544501 POLR2JP52435 117 aaKnown RBP0.12□□□□□ -2.39
YBX3-214ENST00000544501 UBE2D2P62837 147 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 ENHOQ6UWT2 76 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 ATP11AUNQ6ZP68 121 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 OR5A2Q8NGI9 324 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 MT1LQ93083 61 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 TMEM203Q969S6 136 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 SPTSSAQ969W0 71 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 DPY30Q9C005 99 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 CALML5Q9NZT1 146 aa0.12□□□□□ -2.39
YBX3-214ENST00000544501 GVQW2A0A096LPI5 108 aaPredicted RBP0.11□□□□□ -2.39
YBX3-214ENST00000544501 IFITM5A6NNB3 132 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 I3L2K1 104 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 PGRMC1O00264 195 aaKnown RBP0.11□□□□□ -2.39
YBX3-214ENST00000544501 SPINK4O60575 86 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 MT-ND4LP03901 98 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 SLC25A5P05141 298 aaKnown RBP0.11□□□□□ -2.39
YBX3-214ENST00000544501 CCKP06307 115 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 SFTA3P0C7M3 94 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 ADCYAP1P18509 176 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 LSM3P62310 102 aaKnown RBP0.11□□□□□ -2.39
YBX3-214ENST00000544501 KRTAP6-1Q3LI64 71 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 HSD17B12Q53GQ0 312 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 Q56UQ5 140 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 RPL39P5Q59GN2 51 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 TMEM128Q5BJH2 165 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 CLPSL2Q6UWE3 100 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 TOMM20LQ6UXN7 152 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 SMIM15Q7Z3B0 74 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 ARL11Q969Q4 196 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 DMAC1Q96GE9 116 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 ATG5Q9H1Y0 275 aa0.11□□□□□ -2.39
YBX3-214ENST00000544501 MRPL35Q9NZE8 188 aaKnown RBP0.11□□□□□ -2.39
YBX3-214ENST00000544501 A0A087WWC5 75 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 TRBV7-6A0A0J9YX20 115 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 RBAKDNA6NC62 111 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 C9JAW5 83 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 K7EIM0 57 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 BCE1O60756 84 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 CYB5AP00167 134 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 MT1AP04731 61 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 TSPAN19P0C672 248 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 LINC00694P0DN24 101 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 RPS27P42677 84 aaKnown RBP0.1□□□□□ -2.39
YBX3-214ENST00000544501 RHOHQ15669 191 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 OR8I2Q8N0Y5 310 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 TMEM141Q96I45 108 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 DSCR8Q96T75 97 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 BANF2Q9H503 90 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 RERGLQ9H628 205 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 RPRMQ9NS64 109 aa0.1□□□□□ -2.39
YBX3-214ENST00000544501 IGLC7A0M8Q6 106 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 FAM24AA6NFZ4 105 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 F2Z2F3 143 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 ZNF670-ZNF695F2Z2N8 137 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 TSTD3H0UI37 97 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 H0YJX3 145 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 J3KT08 172 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 HMGN4O00479 90 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 UQCRQO14949 82 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 GNG7O60262 68 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 APOC1P02654 83 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 MORN2Q502X0 79 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 SNX29P2Q8IUI4 249 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 NPVFQ9HCQ7 196 aa0.09□□□□□ -2.4
YBX3-214ENST00000544501 TRBV10-1A0A0K0K1A3 114 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 PNMA8CA0A1B0GUJ8 204 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 TCRBV3S1A0A5B6 114 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 CPSF4LA6NMK7 179 aaKnown RBP0.08□□□□□ -2.4
YBX3-214ENST00000544501 TMEM262E9PQX1 116 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 M0R129 80 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 DEGS1O15121 323 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 YPEL1O60688 119 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 DPM2O94777 84 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 S100A5P33763 92 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 PKIAP61925 76 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 HIST1H1AQ02539 215 aaPredicted RBP0.08□□□□□ -2.4
YBX3-214ENST00000544501 KLKP1Q107X0 134 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 CLLU1Q5K131 121 aa0.08□□□□□ -2.4
YBX3-214ENST00000544501 SPRR4Q96PI1 79 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms