RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 GAGE2AQ6NT46 116 aa6.07□□□□□ -1.44
AP000439.1-201ENST00000544004 KRTAP4-16G5E9R7 235 aaPredicted RBP6.06□□□□□ -1.44
AP000439.1-201ENST00000544004 J3QQQ9 107 aa6.06□□□□□ -1.44
AP000439.1-201ENST00000544004 PRYO14603 147 aa6.04□□□□□ -1.44
AP000439.1-201ENST00000544004 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 TRBV10-3A0A0K0K1G6 114 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 ETDCA0A1B0GVM5 59 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BKO60814 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BJP06899 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BOP23527 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BBP33778 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 NMUP48645 174 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BDP58876 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BCP62807 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 S100A12P80511 92 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST2H2BEQ16778 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BHQ93079 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BNQ99877 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 HIST1H2BMQ99879 126 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 MIEN1Q9BRT3 115 aa6.03□□□□□ -1.44
AP000439.1-201ENST00000544004 SYS1-DBNDD2H3BUS1 97 aa6.02□□□□□ -1.45
AP000439.1-201ENST00000544004 SPRR1AP35321 89 aa6.02□□□□□ -1.45
AP000439.1-201ENST00000544004 KCNQ1DNQ9H478 68 aa6.02□□□□□ -1.45
AP000439.1-201ENST00000544004 DDTP30046 118 aa6.01□□□□□ -1.45
AP000439.1-201ENST00000544004 NPC2P61916 151 aa6.01□□□□□ -1.45
AP000439.1-201ENST00000544004 ERC2-IT1O76042 136 aa6□□□□□ -1.45
AP000439.1-201ENST00000544004 CFC1P0CG37 223 aa6□□□□□ -1.45
AP000439.1-201ENST00000544004 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
AP000439.1-201ENST00000544004 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 LOC107984156A0A0G2JMH3 177 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 A0A0J9YXY3 114 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 E9PLD3 99 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 IGLV6-57P01721 117 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 ADAMTSL4-AS1Q5T5F5 129 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 C9orf153Q5TBE3 101 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 PET117Q6UWS5 81 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 ARL17AQ8IVW1 177 aa5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 SPANXB1Q9NS25 103 aaPredicted RBP5.99□□□□□ -1.45
AP000439.1-201ENST00000544004 TRBV10-2A0A0K0K1G8 114 aa5.98□□□□□ -1.45
AP000439.1-201ENST00000544004 B5MCH6 92 aa5.97□□□□□ -1.45
AP000439.1-201ENST00000544004 KRTDAPP60985 99 aa5.97□□□□□ -1.45
AP000439.1-201ENST00000544004 LINC01545Q5VT33 79 aa5.97□□□□□ -1.45
AP000439.1-201ENST00000544004 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
AP000439.1-201ENST00000544004 SYNE2Q8WXH0 6885 aaKnown RBP5.96□□□□□ -1.46
AP000439.1-201ENST00000544004 NDUFC2O95298 119 aa5.96□□□□□ -1.46
AP000439.1-201ENST00000544004 C3orf79P0CE67 100 aa5.96□□□□□ -1.46
AP000439.1-201ENST00000544004 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
AP000439.1-201ENST00000544004 ZNF815PA8K554 130 aa5.95□□□□□ -1.46
AP000439.1-201ENST00000544004 EIF4EBP3O60516 100 aaPredicted RBP5.95□□□□□ -1.46
AP000439.1-201ENST00000544004 RPL37P61927 97 aaKnown RBP5.95□□□□□ -1.46
AP000439.1-201ENST00000544004 OR13C6PQ8NH95 151 aa5.95□□□□□ -1.46
AP000439.1-201ENST00000544004 LIMD2Q9BT23 127 aa5.95□□□□□ -1.46
AP000439.1-201ENST00000544004 TRAV23DV6A0A075B6W5 121 aa5.94□□□□□ -1.46
AP000439.1-201ENST00000544004 Q6Q795 121 aa5.94□□□□□ -1.46
AP000439.1-201ENST00000544004 HRCT1Q6UXD1 115 aa5.94□□□□□ -1.46
AP000439.1-201ENST00000544004 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
AP000439.1-201ENST00000544004 Q9BRP9 147 aa5.94□□□□□ -1.46
AP000439.1-201ENST00000544004 C20orf202A1L168 122 aa5.93□□□□□ -1.46
AP000439.1-201ENST00000544004 JOSD1Q15040 202 aaPredicted RBP5.93□□□□□ -1.46
AP000439.1-201ENST00000544004 COA6Q5JTJ3 125 aaKnown RBP5.93□□□□□ -1.46
AP000439.1-201ENST00000544004 TTTY13Q9BZ97 58 aa5.93□□□□□ -1.46
AP000439.1-201ENST00000544004 ZNF73O43830 326 aaPredicted RBP5.92□□□□□ -1.46
AP000439.1-201ENST00000544004 TIMM17BO60830 172 aa5.92□□□□□ -1.46
AP000439.1-201ENST00000544004 HINT1P49773 126 aaPredicted RBP5.92□□□□□ -1.46
AP000439.1-201ENST00000544004 Q6ZRX8 168 aa5.92□□□□□ -1.46
AP000439.1-201ENST00000544004 LITAFQ99732 161 aa5.92□□□□□ -1.46
AP000439.1-201ENST00000544004 CBY1Q9Y3M2 126 aa5.92□□□□□ -1.46
AP000439.1-201ENST00000544004 SCGB1D4Q6XE38 83 aa5.91□□□□□ -1.46
AP000439.1-201ENST00000544004 ATOH7Q8N100 152 aa5.91□□□□□ -1.46
AP000439.1-201ENST00000544004 SPANXCQ9NY87 97 aa5.91□□□□□ -1.46
AP000439.1-201ENST00000544004 LCE2BO14633 110 aa5.89□□□□□ -1.47
AP000439.1-201ENST00000544004 ANKRD39Q53RE8 183 aa5.89□□□□□ -1.47
AP000439.1-201ENST00000544004 LINC00518Q8N0U6 118 aa5.88□□□□□ -1.47
AP000439.1-201ENST00000544004 ST20-AS1Q8NBB2 130 aa5.88□□□□□ -1.47
AP000439.1-201ENST00000544004 SPANXDQ9BXN6 97 aa5.87□□□□□ -1.47
AP000439.1-201ENST00000544004 COX7BP24311 80 aa5.86□□□□□ -1.47
AP000439.1-201ENST00000544004 S100A2P29034 98 aa5.86□□□□□ -1.47
AP000439.1-201ENST00000544004 AKR1D1P51857 326 aa5.86□□□□□ -1.47
AP000439.1-201ENST00000544004 COPS9Q8WXC6 57 aa5.86□□□□□ -1.47
AP000439.1-201ENST00000544004 A6NDN8 102 aa5.85□□□□□ -1.47
AP000439.1-201ENST00000544004 PCP2Q8IVA1 136 aa5.85□□□□□ -1.47
AP000439.1-201ENST00000544004 DHRS4-AS1Q9P1J3 65 aa5.85□□□□□ -1.47
AP000439.1-201ENST00000544004 IFITM1P13164 125 aa5.84□□□□□ -1.47
AP000439.1-201ENST00000544004 S100A1P23297 94 aa5.84□□□□□ -1.47
AP000439.1-201ENST00000544004 C6orf99Q4VX62 202 aa5.84□□□□□ -1.47
AP000439.1-201ENST00000544004 MUSTN1Q8IVN3 82 aa5.84□□□□□ -1.47
AP000439.1-201ENST00000544004 C5orf52A6NGY3 159 aa5.83□□□□□ -1.48
AP000439.1-201ENST00000544004 H7C2G1 150 aa5.83□□□□□ -1.48
AP000439.1-201ENST00000544004 TAL2Q16559 108 aa5.83□□□□□ -1.48
AP000439.1-201ENST00000544004 HIST3H2BBQ8N257 126 aa5.83□□□□□ -1.48
AP000439.1-201ENST00000544004 DEFB105AQ8NG35 78 aa5.83□□□□□ -1.48
AP000439.1-201ENST00000544004 HSBP1L1C9JCN9 74 aa5.82□□□□□ -1.48
AP000439.1-201ENST00000544004 MT2AP02795 61 aa5.82□□□□□ -1.48
AP000439.1-201ENST00000544004 S100A6P06703 90 aa5.82□□□□□ -1.48
AP000439.1-201ENST00000544004 ELOF1P60002 83 aaKnown RBP5.82□□□□□ -1.48
AP000439.1-201ENST00000544004 SNRPEP62304 92 aaKnown RBP5.82□□□□□ -1.48
AP000439.1-201ENST00000544004 C1orf195Q5TG92 126 aa5.82□□□□□ -1.48
AP000439.1-201ENST00000544004 SLC25A34Q6PIV7 304 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms