RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
TSFM-208ENST00000543727 ZNF706Q9Y5V0 76 aaPredicted RBP10.68□□□□□ -0.7
TSFM-208ENST00000543727 HIGD2AQ9BW72 106 aa10.67□□□□□ -0.7
TSFM-208ENST00000543727 DLEU1O43261 78 aa10.66□□□□□ -0.7
TSFM-208ENST00000543727 ZNF73O43830 326 aaPredicted RBP10.66□□□□□ -0.7
TSFM-208ENST00000543727 COX8AP10176 69 aa10.66□□□□□ -0.7
TSFM-208ENST00000543727 CRYGAP11844 174 aa10.66□□□□□ -0.7
TSFM-208ENST00000543727 Q6ZRX8 168 aa10.66□□□□□ -0.7
TSFM-208ENST00000543727 B5MCH6 92 aa10.65□□□□□ -0.7
TSFM-208ENST00000543727 HINT1P49773 126 aaPredicted RBP10.65□□□□□ -0.7
TSFM-208ENST00000543727 MUSTN1Q8IVN3 82 aa10.64□□□□□ -0.71
TSFM-208ENST00000543727 OR13C6PQ8NH95 151 aa10.64□□□□□ -0.71
TSFM-208ENST00000543727 VAMP8Q9BV40 100 aa10.64□□□□□ -0.71
TSFM-208ENST00000543727 HERC1Q15751 4861 aa10.64□□□□□ -0.71
TSFM-208ENST00000543727 TNXBP22105 4242 aa10.62□□□□□ -0.71
TSFM-208ENST00000543727 SMCR5Q8TEV8 140 aa10.61□□□□□ -0.71
TSFM-208ENST00000543727 TMA7Q9Y2S6 64 aaKnown RBP10.61□□□□□ -0.71
TSFM-208ENST00000543727 A0A087X002 238 aa10.6□□□□□ -0.71
TSFM-208ENST00000543727 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
TSFM-208ENST00000543727 SPRR4Q96PI1 79 aa10.6□□□□□ -0.71
TSFM-208ENST00000543727 PAM16Q9Y3D7 125 aa10.6□□□□□ -0.71
TSFM-208ENST00000543727 TRAV13-2A0A0B4J235 113 aa10.59□□□□□ -0.71
TSFM-208ENST00000543727 TYMSOSQ8TAI1 123 aa10.58□□□□□ -0.72
TSFM-208ENST00000543727 TRBV7-6A0A0J9YX20 115 aa10.57□□□□□ -0.72
TSFM-208ENST00000543727 Q9BRP9 147 aa10.57□□□□□ -0.72
TSFM-208ENST00000543727 HIGD1BQ9P298 99 aa10.57□□□□□ -0.72
TSFM-208ENST00000543727 A6NDN8 102 aa10.56□□□□□ -0.72
TSFM-208ENST00000543727 SLC25A34Q6PIV7 304 aa10.56□□□□□ -0.72
TSFM-208ENST00000543727 LINC00483Q53H64 154 aa10.55□□□□□ -0.72
TSFM-208ENST00000543727 PYY3Q5JQD4 70 aa10.55□□□□□ -0.72
TSFM-208ENST00000543727 HIST1H4GQ99525 98 aa10.55□□□□□ -0.72
TSFM-208ENST00000543727 DHRS4-AS1Q9P1J3 65 aa10.55□□□□□ -0.72
TSFM-208ENST00000543727 ELOF1P60002 83 aaKnown RBP10.54□□□□□ -0.72
TSFM-208ENST00000543727 CTAG1AP78358 180 aa10.54□□□□□ -0.72
TSFM-208ENST00000543727 C6orf99Q4VX62 202 aa10.54□□□□□ -0.72
TSFM-208ENST00000543727 C14orf144Q96I85 54 aa10.54□□□□□ -0.72
TSFM-208ENST00000543727 ANAPC11Q9NYG5 84 aa10.54□□□□□ -0.72
TSFM-208ENST00000543727 KRTAP13-2Q52LG2 175 aa10.53□□□□□ -0.72
TSFM-208ENST00000543727 A0A1B0GWB2 263 aa10.52□□□□□ -0.73
TSFM-208ENST00000543727 A4D1N5 150 aa10.52□□□□□ -0.73
TSFM-208ENST00000543727 COX7BP24311 80 aa10.52□□□□□ -0.73
TSFM-208ENST00000543727 ERC2-IT1O76042 136 aa10.5□□□□□ -0.73
TSFM-208ENST00000543727 TAL2Q16559 108 aa10.49□□□□□ -0.73
TSFM-208ENST00000543727 GAGE2AQ6NT46 116 aa10.47□□□□□ -0.73
TSFM-208ENST00000543727 LINC00304Q8N9R0 145 aa10.47□□□□□ -0.73
TSFM-208ENST00000543727 SMIM11BQ8TCY0 68 aa10.47□□□□□ -0.73
TSFM-208ENST00000543727 C2orf91Q6ZV80 131 aa10.46□□□□□ -0.73
TSFM-208ENST00000543727 NHP2Q9NX24 153 aaKnown RBP10.46□□□□□ -0.73
TSFM-208ENST00000543727 VAMP3Q15836 100 aa10.45□□□□□ -0.74
TSFM-208ENST00000543727 C3orf22Q8N5N4 141 aa10.45□□□□□ -0.74
TSFM-208ENST00000543727 SPAG11AQ6PDA7 123 aa10.44□□□□□ -0.74
TSFM-208ENST00000543727 TMEM238LA0A1B0GVL6 79 aa10.43□□□□□ -0.74
TSFM-208ENST00000543727 A6NJY4 79 aa10.43□□□□□ -0.74
TSFM-208ENST00000543727 SPRR1BP22528 89 aa10.43□□□□□ -0.74
TSFM-208ENST00000543727 A0A0B4J2C4 111 aa10.42□□□□□ -0.74
TSFM-208ENST00000543727 SSBP3-AS1Q7Z2R9 100 aa10.41□□□□□ -0.74
TSFM-208ENST00000543727 CEND1Q8N111 149 aa10.41□□□□□ -0.74
TSFM-208ENST00000543727 SLC25A20O43772 301 aa10.4□□□□□ -0.74
TSFM-208ENST00000543727 CFC1BP0CG36 223 aa10.39□□□□□ -0.75
TSFM-208ENST00000543727 CFC1P0CG37 223 aa10.39□□□□□ -0.75
TSFM-208ENST00000543727 BVES-AS1Q5T3Y7 98 aa10.39□□□□□ -0.75
TSFM-208ENST00000543727 ST20-AS1Q8NBB2 130 aa10.39□□□□□ -0.75
TSFM-208ENST00000543727 RAB37Q96AX2 223 aa10.39□□□□□ -0.75
TSFM-208ENST00000543727 C12orf57Q99622 126 aa10.39□□□□□ -0.75
TSFM-208ENST00000543727 UQCR10Q9UDW1 63 aa10.39□□□□□ -0.75
TSFM-208ENST00000543727 C4orf48Q5BLP8 95 aa10.38□□□□□ -0.75
TSFM-208ENST00000543727 TEX49A0A1B0GTD5 131 aa10.37□□□□□ -0.75
TSFM-208ENST00000543727 HSD52Q0P140 79 aa10.37□□□□□ -0.75
TSFM-208ENST00000543727 Q8NBF4 154 aa10.37□□□□□ -0.75
TSFM-208ENST00000543727 IGLV5-48A0A075B6I7 105 aa10.36□□□□□ -0.75
TSFM-208ENST00000543727 IGLV9-49A0A0B4J1Y8 123 aa10.36□□□□□ -0.75
TSFM-208ENST00000543727 TSPAN13O95857 204 aa10.36□□□□□ -0.75
TSFM-208ENST00000543727 MOBPQ13875 183 aa10.36□□□□□ -0.75
TSFM-208ENST00000543727 LAMTOR3Q9UHA4 124 aa10.36□□□□□ -0.75
TSFM-208ENST00000543727 SPINK1P00995 79 aa10.35□□□□□ -0.75
TSFM-208ENST00000543727 LINC00575Q6W349 94 aa10.35□□□□□ -0.75
TSFM-208ENST00000543727 SMIM6P0DI80 62 aa10.34□□□□□ -0.75
TSFM-208ENST00000543727 RPS29P62273 56 aaKnown RBP10.34□□□□□ -0.75
TSFM-208ENST00000543727 HMCN2Q8NDA2 5059 aa10.34□□□□□ -0.75
TSFM-208ENST00000543727 C9orf153Q5TBE3 101 aa10.33□□□□□ -0.76
TSFM-208ENST00000543727 hADV29S1A0JD25 119 aa10.32□□□□□ -0.76
TSFM-208ENST00000543727 PRO1854Q9UHT4 67 aa10.32□□□□□ -0.76
TSFM-208ENST00000543727 FXYD2P54710 66 aa10.31□□□□□ -0.76
TSFM-208ENST00000543727 SNCGO76070 127 aa10.3□□□□□ -0.76
TSFM-208ENST00000543727 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
TSFM-208ENST00000543727 H0YGX0 51 aa10.29□□□□□ -0.76
TSFM-208ENST00000543727 H7C2G1 150 aa10.29□□□□□ -0.76
TSFM-208ENST00000543727 LINC01547P58512 204 aaPredicted RBP10.29□□□□□ -0.76
TSFM-208ENST00000543727 PRR4Q16378 134 aa10.29□□□□□ -0.76
TSFM-208ENST00000543727 Q1RN00 199 aa10.28□□□□□ -0.76
TSFM-208ENST00000543727 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.27□□□□□ -0.77
TSFM-208ENST00000543727 PPDPFLQ8WWR9 84 aa10.27□□□□□ -0.77
TSFM-208ENST00000543727 Q6ZQY7 126 aa10.26□□□□□ -0.77
TSFM-208ENST00000543727 SMIM29Q86T20 159 aa10.26□□□□□ -0.77
TSFM-208ENST00000543727 Q8N377 158 aa10.25□□□□□ -0.77
TSFM-208ENST00000543727 A0A1B0GX51 115 aa10.24□□□□□ -0.77
TSFM-208ENST00000543727 PRO1933Q9H354 126 aa10.24□□□□□ -0.77
TSFM-208ENST00000543727 CD164Q04900 197 aa10.23□□□□□ -0.77
TSFM-208ENST00000543727 OCIAD2Q56VL3 154 aa10.23□□□□□ -0.77
TSFM-208ENST00000543727 FP248Q71RG6 208 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms