RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 FABP4P15090 132 aa10.92□□□□□ -0.66
CACNA1C-230ENST00000543114 SEC61BP60468 96 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-230ENST00000543114 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
CACNA1C-230ENST00000543114 SLC25A20O43772 301 aa10.91□□□□□ -0.66
CACNA1C-230ENST00000543114 IGKCP01834 107 aa10.91□□□□□ -0.66
CACNA1C-230ENST00000543114 NPC2P61916 151 aa10.91□□□□□ -0.66
CACNA1C-230ENST00000543114 C9orf153Q5TBE3 101 aa10.91□□□□□ -0.66
CACNA1C-230ENST00000543114 ST20-AS1Q8NBB2 130 aa10.9□□□□□ -0.66
CACNA1C-230ENST00000543114 ZNF73O43830 326 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-230ENST00000543114 JOSD1Q15040 202 aaPredicted RBP10.89□□□□□ -0.67
CACNA1C-230ENST00000543114 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
CACNA1C-230ENST00000543114 A0A0J9YXY3 114 aa10.88□□□□□ -0.67
CACNA1C-230ENST00000543114 LINC01547P58512 204 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-230ENST00000543114 XP32Q5T750 250 aa10.87□□□□□ -0.67
CACNA1C-230ENST00000543114 E9PLD3 99 aa10.84□□□□□ -0.67
CACNA1C-230ENST00000543114 LITAFQ99732 161 aa10.81□□□□□ -0.68
CACNA1C-230ENST00000543114 C5orf52A6NGY3 159 aa10.79□□□□□ -0.68
CACNA1C-230ENST00000543114 SPANXCQ9NY87 97 aa10.79□□□□□ -0.68
CACNA1C-230ENST00000543114 COLCA2A8K830 154 aa10.78□□□□□ -0.68
CACNA1C-230ENST00000543114 SPRR1BP22528 89 aa10.78□□□□□ -0.68
CACNA1C-230ENST00000543114 HINT1P49773 126 aaPredicted RBP10.78□□□□□ -0.68
CACNA1C-230ENST00000543114 LINC00308Q8TCZ7 52 aa10.78□□□□□ -0.68
CACNA1C-230ENST00000543114 CBY1Q9Y3M2 126 aa10.77□□□□□ -0.69
CACNA1C-230ENST00000543114 OR13C6PQ8NH95 151 aa10.76□□□□□ -0.69
CACNA1C-230ENST00000543114 HRCT1Q6UXD1 115 aa10.75□□□□□ -0.69
CACNA1C-230ENST00000543114 FSIP2Q5CZC0 6907 aa10.74□□□□□ -0.69
CACNA1C-230ENST00000543114 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
CACNA1C-230ENST00000543114 LCE2CQ5TA81 110 aa10.74□□□□□ -0.69
CACNA1C-230ENST00000543114 LIMD2Q9BT23 127 aa10.74□□□□□ -0.69
CACNA1C-230ENST00000543114 DHRS4-AS1Q9P1J3 65 aa10.74□□□□□ -0.69
CACNA1C-230ENST00000543114 TIMM17BO60830 172 aa10.73□□□□□ -0.69
CACNA1C-230ENST00000543114 SLC25A34Q6PIV7 304 aa10.73□□□□□ -0.69
CACNA1C-230ENST00000543114 KRTAP19-2Q3LHN2 52 aa10.72□□□□□ -0.69
CACNA1C-230ENST00000543114 SPANXDQ9BXN6 97 aa10.72□□□□□ -0.69
CACNA1C-230ENST00000543114 TTTY13Q9BZ97 58 aa10.72□□□□□ -0.69
CACNA1C-230ENST00000543114 ELOF1P60002 83 aaKnown RBP10.71□□□□□ -0.69
CACNA1C-230ENST00000543114 ZNF815PA8K554 130 aa10.7□□□□□ -0.7
CACNA1C-230ENST00000543114 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
CACNA1C-230ENST00000543114 C9orf92A6NGG3 77 aa10.69□□□□□ -0.7
CACNA1C-230ENST00000543114 C6orf99Q4VX62 202 aa10.69□□□□□ -0.7
CACNA1C-230ENST00000543114 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
CACNA1C-230ENST00000543114 LAMTOR3Q9UHA4 124 aa10.69□□□□□ -0.7
CACNA1C-230ENST00000543114 COX7BP24311 80 aa10.68□□□□□ -0.7
CACNA1C-230ENST00000543114 PCOTHQ58A44 107 aa10.68□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BKO60814 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BJP06899 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BOP23527 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BBP33778 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BDP58876 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BCP62807 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST2H2BEQ16778 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 Q1RN00 199 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BHQ93079 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BNQ99877 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 HIST1H2BMQ99879 126 aa10.67□□□□□ -0.7
CACNA1C-230ENST00000543114 PET117Q6UWS5 81 aa10.65□□□□□ -0.7
CACNA1C-230ENST00000543114 IGLV8-61A0A075B6I0 122 aa10.64□□□□□ -0.71
CACNA1C-230ENST00000543114 TAL2Q16559 108 aa10.64□□□□□ -0.71
CACNA1C-230ENST00000543114 DEFB105AQ8NG35 78 aa10.64□□□□□ -0.71
CACNA1C-230ENST00000543114 LINC00518Q8N0U6 118 aa10.63□□□□□ -0.71
CACNA1C-230ENST00000543114 H7C2G1 150 aa10.62□□□□□ -0.71
CACNA1C-230ENST00000543114 MT1HP80294 61 aa10.62□□□□□ -0.71
CACNA1C-230ENST00000543114 CD164Q04900 197 aa10.62□□□□□ -0.71
CACNA1C-230ENST00000543114 TEX49A0A1B0GTD5 131 aa10.61□□□□□ -0.71
CACNA1C-230ENST00000543114 C3orf79P0CE67 100 aa10.61□□□□□ -0.71
CACNA1C-230ENST00000543114 PRO1933Q9H354 126 aa10.61□□□□□ -0.71
CACNA1C-230ENST00000543114 SMIM29Q86T20 159 aa10.6□□□□□ -0.71
CACNA1C-230ENST00000543114 TRBV7-6A0A0J9YX20 115 aa10.58□□□□□ -0.72
CACNA1C-230ENST00000543114 A0A0G2JQZ4 141 aa10.57□□□□□ -0.72
CACNA1C-230ENST00000543114 Q5XG85 94 aa10.57□□□□□ -0.72
CACNA1C-230ENST00000543114 SCGB1D4Q6XE38 83 aa10.57□□□□□ -0.72
CACNA1C-230ENST00000543114 IGLV5-48A0A075B6I7 105 aa10.56□□□□□ -0.72
CACNA1C-230ENST00000543114 A0A1B0GWB2 263 aa10.56□□□□□ -0.72
CACNA1C-230ENST00000543114 CRCT1Q9UGL9 99 aa10.56□□□□□ -0.72
CACNA1C-230ENST00000543114 C1orf195Q5TG92 126 aa10.55□□□□□ -0.72
CACNA1C-230ENST00000543114 AKR1D1P51857 326 aa10.54□□□□□ -0.72
CACNA1C-230ENST00000543114 KRTDAPP60985 99 aa10.54□□□□□ -0.72
CACNA1C-230ENST00000543114 ANKRD39Q53RE8 183 aa10.54□□□□□ -0.72
CACNA1C-230ENST00000543114 A6NDN8 102 aa10.53□□□□□ -0.72
CACNA1C-230ENST00000543114 CFC1BP0CG36 223 aa10.51□□□□□ -0.73
CACNA1C-230ENST00000543114 IFITM1P13164 125 aa10.51□□□□□ -0.73
CACNA1C-230ENST00000543114 COPS9Q8WXC6 57 aa10.51□□□□□ -0.73
CACNA1C-230ENST00000543114 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-230ENST00000543114 COA6Q5JTJ3 125 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-230ENST00000543114 MUSTN1Q8IVN3 82 aa10.49□□□□□ -0.73
CACNA1C-230ENST00000543114 ATOH7Q8N100 152 aa10.49□□□□□ -0.73
CACNA1C-230ENST00000543114 FLGP20930 4061 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-230ENST00000543114 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
CACNA1C-230ENST00000543114 C20orf202A1L168 122 aa10.47□□□□□ -0.73
CACNA1C-230ENST00000543114 LORP23490 312 aaPredicted RBP10.47□□□□□ -0.73
CACNA1C-230ENST00000543114 Q6ZVH6 145 aa10.47□□□□□ -0.73
CACNA1C-230ENST00000543114 A4D1N5 150 aa10.46□□□□□ -0.73
CACNA1C-230ENST00000543114 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.73
CACNA1C-230ENST00000543114 KRTAP10-6P60371 365 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-230ENST00000543114 KRTAP3-3Q9BYR6 98 aa10.44□□□□□ -0.74
CACNA1C-230ENST00000543114 KRTAP3-2Q9BYR7 98 aa10.44□□□□□ -0.74
CACNA1C-230ENST00000543114 NHP2Q9NX24 153 aaKnown RBP10.44□□□□□ -0.74
CACNA1C-230ENST00000543114 TRAV13-2A0A0B4J235 113 aa10.43□□□□□ -0.74
CACNA1C-230ENST00000543114 TCL1BO95988 128 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms