RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 Q5XG85 94 aa10.16□□□□□ -0.78
CNOT9-208ENST00000542068 BPY2O14599 106 aa10.16□□□□□ -0.78
CNOT9-208ENST00000542068 KRTAP24-1Q3LI83 254 aa10.16□□□□□ -0.78
CNOT9-208ENST00000542068 PRR34Q9NV39 138 aa10.15□□□□□ -0.78
CNOT9-208ENST00000542068 VPREB1P12018 145 aa10.14□□□□□ -0.79
CNOT9-208ENST00000542068 ELOF1P60002 83 aaKnown RBP10.13□□□□□ -0.79
CNOT9-208ENST00000542068 RPL37AP8A6NKH3 93 aa10.12□□□□□ -0.79
CNOT9-208ENST00000542068 TRBV7-4A0A0J9YYF1 115 aa10.11□□□□□ -0.79
CNOT9-208ENST00000542068 PDE6GP18545 87 aa10.11□□□□□ -0.79
CNOT9-208ENST00000542068 NREPQ16612 68 aa10.11□□□□□ -0.79
CNOT9-208ENST00000542068 Q6ZRP5 223 aa10.11□□□□□ -0.79
CNOT9-208ENST00000542068 M0R378 163 aa10.1□□□□□ -0.79
CNOT9-208ENST00000542068 TENM2Q9NT68 2774 aa10.1□□□□□ -0.79
CNOT9-208ENST00000542068 CXCL6P80162 114 aa10.1□□□□□ -0.79
CNOT9-208ENST00000542068 NDUFC2-KCTD14E9PQ53 114 aa10.09□□□□□ -0.79
CNOT9-208ENST00000542068 NKAPP1Q8N9T2 125 aa10.09□□□□□ -0.79
CNOT9-208ENST00000542068 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
CNOT9-208ENST00000542068 GVQW2A0A096LPI5 108 aaPredicted RBP10.08□□□□□ -0.8
CNOT9-208ENST00000542068 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
CNOT9-208ENST00000542068 EGFEM1PQ0D2K5 195 aa10.06□□□□□ -0.8
CNOT9-208ENST00000542068 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
CNOT9-208ENST00000542068 SERP1Q9Y6X1 66 aa10.06□□□□□ -0.8
CNOT9-208ENST00000542068 SYCNQ0VAF6 134 aa10.06□□□□□ -0.8
CNOT9-208ENST00000542068 SERTAD4-AS1Q5TG53 156 aa10.06□□□□□ -0.8
CNOT9-208ENST00000542068 KLKP1Q107X0 134 aa10.05□□□□□ -0.8
CNOT9-208ENST00000542068 TMEM254Q8TBM7 123 aa10.04□□□□□ -0.8
CNOT9-208ENST00000542068 MPLKIPQ8TAP9 179 aa10.04□□□□□ -0.8
CNOT9-208ENST00000542068 FAM168BA1KXE4 195 aa10.04□□□□□ -0.8
CNOT9-208ENST00000542068 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
CNOT9-208ENST00000542068 CASC10Q5T4H9 136 aa10.02□□□□□ -0.81
CNOT9-208ENST00000542068 ST20-AS1Q8NBB2 130 aa10.02□□□□□ -0.81
CNOT9-208ENST00000542068 C7orf33Q8WU49 177 aa10.02□□□□□ -0.81
CNOT9-208ENST00000542068 A0A0G2JQZ4 141 aa10.01□□□□□ -0.81
CNOT9-208ENST00000542068 TRBV7-6A0A0J9YX20 115 aa10.01□□□□□ -0.81
CNOT9-208ENST00000542068 A0A1W2PNN7 141 aa10.01□□□□□ -0.81
CNOT9-208ENST00000542068 IGKV4-1P06312 121 aa10.01□□□□□ -0.81
CNOT9-208ENST00000542068 LINC00336Q6ZUF6 198 aa10.01□□□□□ -0.81
CNOT9-208ENST00000542068 HIGD2AQ9BW72 106 aa10.01□□□□□ -0.81
CNOT9-208ENST00000542068 H3BQ85 93 aa10□□□□□ -0.81
CNOT9-208ENST00000542068 KRTAP26-1Q6PEX3 210 aa10□□□□□ -0.81
CNOT9-208ENST00000542068 Q8N377 158 aa10□□□□□ -0.81
CNOT9-208ENST00000542068 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
CNOT9-208ENST00000542068 LRCOL1A6NCL2 159 aa9.99□□□□□ -0.81
CNOT9-208ENST00000542068 CSMD3Q7Z407 3707 aa9.98□□□□□ -0.81
CNOT9-208ENST00000542068 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
CNOT9-208ENST00000542068 ANK2Q01484 3957 aa9.97□□□□□ -0.81
CNOT9-208ENST00000542068 BCE1O60756 84 aa9.96□□□□□ -0.81
CNOT9-208ENST00000542068 SMIM29Q86T20 159 aa9.96□□□□□ -0.81
CNOT9-208ENST00000542068 DEFB116Q30KQ4 102 aa9.96□□□□□ -0.82
CNOT9-208ENST00000542068 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.95□□□□□ -0.82
CNOT9-208ENST00000542068 ETDCA0A1B0GVM5 59 aa9.95□□□□□ -0.82
CNOT9-208ENST00000542068 FAM229BQ4G0N7 80 aa9.95□□□□□ -0.82
CNOT9-208ENST00000542068 LINC00588Q9Y4M8 146 aa9.95□□□□□ -0.82
CNOT9-208ENST00000542068 PSCAO43653 123 aa9.95□□□□□ -0.82
CNOT9-208ENST00000542068 FUSP35637 526 aaKnown RBP eCLIP9.95□□□□□ -0.82
CNOT9-208ENST00000542068 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
CNOT9-208ENST00000542068 UBE2BP63146 152 aa9.94□□□□□ -0.82
CNOT9-208ENST00000542068 PRR4Q16378 134 aa9.94□□□□□ -0.82
CNOT9-208ENST00000542068 SMIM26A0A096LP01 95 aa9.94□□□□□ -0.82
CNOT9-208ENST00000542068 PRYO14603 147 aa9.94□□□□□ -0.82
CNOT9-208ENST00000542068 C1orf137Q5JT78 98 aa9.92□□□□□ -0.82
CNOT9-208ENST00000542068 PKIGQ9Y2B9 76 aa9.92□□□□□ -0.82
CNOT9-208ENST00000542068 ERC2-IT1O76042 136 aa9.92□□□□□ -0.82
CNOT9-208ENST00000542068 UBE2DNLQ8IWF7 75 aa9.92□□□□□ -0.82
CNOT9-208ENST00000542068 BRK1Q8WUW1 75 aa9.92□□□□□ -0.82
CNOT9-208ENST00000542068 A0A1W2PNM2 257 aa9.92□□□□□ -0.82
CNOT9-208ENST00000542068 Q9BRP9 147 aa9.92□□□□□ -0.82
CNOT9-208ENST00000542068 WIPF1O43516 503 aa9.91□□□□□ -0.82
CNOT9-208ENST00000542068 A0A0U1RQV1 116 aa9.9□□□□□ -0.82
CNOT9-208ENST00000542068 OCR1Q9BZK8 76 aa9.9□□□□□ -0.82
CNOT9-208ENST00000542068 SRRM2Q9UQ35 2752 aaKnown RBP9.9□□□□□ -0.82
CNOT9-208ENST00000542068 NDUFC1O43677 76 aa9.9□□□□□ -0.82
CNOT9-208ENST00000542068 H3BNG1 76 aa9.9□□□□□ -0.83
CNOT9-208ENST00000542068 KCNQ1DNQ9H478 68 aa9.9□□□□□ -0.83
CNOT9-208ENST00000542068 EPM2AB3EWF7 344 aa9.89□□□□□ -0.83
CNOT9-208ENST00000542068 Q6ZRX8 168 aa9.87□□□□□ -0.83
CNOT9-208ENST00000542068 K7EQZ3 153 aa9.86□□□□□ -0.83
CNOT9-208ENST00000542068 K7EIL1 84 aa9.85□□□□□ -0.83
CNOT9-208ENST00000542068 DNAH10OSP0CZ25 163 aa9.84□□□□□ -0.83
CNOT9-208ENST00000542068 DHRS4-AS1Q9P1J3 65 aa9.84□□□□□ -0.83
CNOT9-208ENST00000542068 WFDC13Q8IUB5 93 aa9.83□□□□□ -0.84
CNOT9-208ENST00000542068 IGLV5-48A0A075B6I7 105 aa9.83□□□□□ -0.84
CNOT9-208ENST00000542068 IGLV1-50A0A075B6I6 118 aa9.82□□□□□ -0.84
CNOT9-208ENST00000542068 PRLHP81277 87 aa9.82□□□□□ -0.84
CNOT9-208ENST00000542068 A0A096LNI7 61 aa9.81□□□□□ -0.84
CNOT9-208ENST00000542068 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
CNOT9-208ENST00000542068 Q8NBF4 154 aa9.81□□□□□ -0.84
CNOT9-208ENST00000542068 PRO0628Q9UI54 55 aa9.81□□□□□ -0.84
CNOT9-208ENST00000542068 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
CNOT9-208ENST00000542068 DSCR10P59022 87 aa9.79□□□□□ -0.84
CNOT9-208ENST00000542068 ATP5EP56381 51 aaPredicted RBP9.78□□□□□ -0.84
CNOT9-208ENST00000542068 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
CNOT9-208ENST00000542068 CHTF8P0CG12 524 aa9.78□□□□□ -0.84
CNOT9-208ENST00000542068 LINC00476Q8WZB0 136 aa9.78□□□□□ -0.84
CNOT9-208ENST00000542068 A0A087WSZ3 146 aa9.75□□□□□ -0.85
CNOT9-208ENST00000542068 KRTAP4-16G5E9R7 235 aaPredicted RBP9.75□□□□□ -0.85
CNOT9-208ENST00000542068 REG3GQ6UW15 175 aa9.74□□□□□ -0.85
CNOT9-208ENST00000542068 COL7A1Q02388 2944 aa9.74□□□□□ -0.85
CNOT9-208ENST00000542068 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
CNOT9-208ENST00000542068 TNP2Q05952 138 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms