RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 MAP1LC3CQ9BXW4 147 aa7.27□□□□□ -1.25
SCARB1-207ENST00000541661 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
SCARB1-207ENST00000541661 ETDCA0A1B0GVM5 59 aa7.25□□□□□ -1.25
SCARB1-207ENST00000541661 SLC25A20O43772 301 aa7.25□□□□□ -1.25
SCARB1-207ENST00000541661 LINC01545Q5VT33 79 aa7.25□□□□□ -1.25
SCARB1-207ENST00000541661 BOD1L2Q8IYS8 172 aa7.25□□□□□ -1.25
SCARB1-207ENST00000541661 SMIM13P0DJ93 91 aa7.24□□□□□ -1.25
SCARB1-207ENST00000541661 GAGE2AQ6NT46 116 aa7.24□□□□□ -1.25
SCARB1-207ENST00000541661 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
SCARB1-207ENST00000541661 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
SCARB1-207ENST00000541661 LINC00587B1AMM8 73 aa7.23□□□□□ -1.25
SCARB1-207ENST00000541661 NCR3O14931 201 aa7.23□□□□□ -1.25
SCARB1-207ENST00000541661 DDTP30046 118 aa7.23□□□□□ -1.25
SCARB1-207ENST00000541661 MOBPQ13875 183 aa7.23□□□□□ -1.25
SCARB1-207ENST00000541661 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
SCARB1-207ENST00000541661 IGLV9-49A0A0B4J1Y8 123 aa7.22□□□□□ -1.25
SCARB1-207ENST00000541661 TRBV10-3A0A0K0K1G6 114 aa7.22□□□□□ -1.25
SCARB1-207ENST00000541661 B5MCH6 92 aa7.22□□□□□ -1.25
SCARB1-207ENST00000541661 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
SCARB1-207ENST00000541661 IFI27L1Q96BM0 104 aa7.22□□□□□ -1.25
SCARB1-207ENST00000541661 CHTOPQ9Y3Y2 248 aaKnown RBP7.22□□□□□ -1.25
SCARB1-207ENST00000541661 ERC2-IT1O76042 136 aa7.21□□□□□ -1.26
SCARB1-207ENST00000541661 MIEN1Q9BRT3 115 aa7.21□□□□□ -1.26
SCARB1-207ENST00000541661 PRO1933Q9H354 126 aa7.21□□□□□ -1.26
SCARB1-207ENST00000541661 HERV-K104P63124 156 aa7.2□□□□□ -1.26
SCARB1-207ENST00000541661 MEIG1Q5JSS6 88 aa7.2□□□□□ -1.26
SCARB1-207ENST00000541661 TRAV12-1A0A0B4J245 112 aa7.19□□□□□ -1.26
SCARB1-207ENST00000541661 LOC107984156A0A0G2JMH3 177 aa7.19□□□□□ -1.26
SCARB1-207ENST00000541661 MT1HP80294 61 aa7.19□□□□□ -1.26
SCARB1-207ENST00000541661 SPATA45Q537H7 98 aa7.19□□□□□ -1.26
SCARB1-207ENST00000541661 ARL17AQ8IVW1 177 aa7.19□□□□□ -1.26
SCARB1-207ENST00000541661 Q9BRP9 147 aa7.19□□□□□ -1.26
SCARB1-207ENST00000541661 PAM16Q9Y3D7 125 aa7.19□□□□□ -1.26
SCARB1-207ENST00000541661 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
SCARB1-207ENST00000541661 TRBV10-2A0A0K0K1G8 114 aa7.17□□□□□ -1.26
SCARB1-207ENST00000541661 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
SCARB1-207ENST00000541661 Q6ZRX8 168 aa7.17□□□□□ -1.26
SCARB1-207ENST00000541661 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
SCARB1-207ENST00000541661 HSBP1L1C9JCN9 74 aa7.16□□□□□ -1.26
SCARB1-207ENST00000541661 ATOH7Q8N100 152 aa7.15□□□□□ -1.26
SCARB1-207ENST00000541661 MYMXA0A1B0GTQ4 84 aa7.14□□□□□ -1.27
SCARB1-207ENST00000541661 PMCHL2Q9BQD1 86 aa7.14□□□□□ -1.27
SCARB1-207ENST00000541661 DLEU1O43261 78 aa7.13□□□□□ -1.27
SCARB1-207ENST00000541661 DPM2O94777 84 aa7.12□□□□□ -1.27
SCARB1-207ENST00000541661 IGLV6-57P01721 117 aa7.12□□□□□ -1.27
SCARB1-207ENST00000541661 IGKCP01834 107 aa7.12□□□□□ -1.27
SCARB1-207ENST00000541661 COX8AP10176 69 aa7.12□□□□□ -1.27
SCARB1-207ENST00000541661 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
SCARB1-207ENST00000541661 PCOTHQ58A44 107 aa7.12□□□□□ -1.27
SCARB1-207ENST00000541661 C9orf153Q5TBE3 101 aa7.12□□□□□ -1.27
SCARB1-207ENST00000541661 IGLV8-61A0A075B6I0 122 aa7.11□□□□□ -1.27
SCARB1-207ENST00000541661 H0Y8G0 127 aa7.11□□□□□ -1.27
SCARB1-207ENST00000541661 M0R143 59 aa7.11□□□□□ -1.27
SCARB1-207ENST00000541661 PLNP26678 52 aa7.11□□□□□ -1.27
SCARB1-207ENST00000541661 SLC25A34Q6PIV7 304 aa7.11□□□□□ -1.27
SCARB1-207ENST00000541661 SPANXB1Q9NS25 103 aaPredicted RBP7.11□□□□□ -1.27
SCARB1-207ENST00000541661 NDUFC2O95298 119 aa7.1□□□□□ -1.27
SCARB1-207ENST00000541661 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
SCARB1-207ENST00000541661 TSPEAR-AS2P59090 65 aa7.09□□□□□ -1.27
SCARB1-207ENST00000541661 TRAV23DV6A0A075B6W5 121 aa7.08□□□□□ -1.28
SCARB1-207ENST00000541661 LEPROTO15243 131 aa7.08□□□□□ -1.28
SCARB1-207ENST00000541661 ANKRD39Q53RE8 183 aa7.08□□□□□ -1.28
SCARB1-207ENST00000541661 S100A7L2Q5SY68 101 aa7.08□□□□□ -1.28
SCARB1-207ENST00000541661 ST20-AS1Q8NBB2 130 aa7.08□□□□□ -1.28
SCARB1-207ENST00000541661 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
SCARB1-207ENST00000541661 SNHG12Q9BXW3 62 aa7.08□□□□□ -1.28
SCARB1-207ENST00000541661 C9orf92A6NGG3 77 aa7.06□□□□□ -1.28
SCARB1-207ENST00000541661 ZNF73O43830 326 aaPredicted RBP7.06□□□□□ -1.28
SCARB1-207ENST00000541661 SPRR1BP22528 89 aa7.06□□□□□ -1.28
SCARB1-207ENST00000541661 KRTAP3-3Q9BYR6 98 aa7.06□□□□□ -1.28
SCARB1-207ENST00000541661 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
SCARB1-207ENST00000541661 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
SCARB1-207ENST00000541661 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
SCARB1-207ENST00000541661 E9PLD3 99 aa7.04□□□□□ -1.28
SCARB1-207ENST00000541661 J3QQQ9 107 aa7.04□□□□□ -1.28
SCARB1-207ENST00000541661 NMUP48645 174 aa7.04□□□□□ -1.28
SCARB1-207ENST00000541661 C2orf91Q6ZV80 131 aa7.04□□□□□ -1.28
SCARB1-207ENST00000541661 HRCT1Q6UXD1 115 aa7.03□□□□□ -1.28
SCARB1-207ENST00000541661 SOSTDC1Q6X4U4 206 aa7.03□□□□□ -1.28
SCARB1-207ENST00000541661 HINT1P49773 126 aaPredicted RBP7.02□□□□□ -1.29
SCARB1-207ENST00000541661 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
SCARB1-207ENST00000541661 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
SCARB1-207ENST00000541661 CD164Q04900 197 aa7.01□□□□□ -1.29
SCARB1-207ENST00000541661 COL5A1-AS1Q5SY13 56 aa7.01□□□□□ -1.29
SCARB1-207ENST00000541661 PCP2Q8IVA1 136 aa7.01□□□□□ -1.29
SCARB1-207ENST00000541661 M0R2T5 61 aa7□□□□□ -1.29
SCARB1-207ENST00000541661 HERVK_113P61574 105 aa7□□□□□ -1.29
SCARB1-207ENST00000541661 ADAMTSL4-AS1Q5T5F5 129 aa7□□□□□ -1.29
SCARB1-207ENST00000541661 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
SCARB1-207ENST00000541661 LAMTOR3Q9UHA4 124 aa7□□□□□ -1.29
SCARB1-207ENST00000541661 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
SCARB1-207ENST00000541661 HSD52Q0P140 79 aa6.99□□□□□ -1.29
SCARB1-207ENST00000541661 TAL2Q16559 108 aa6.99□□□□□ -1.29
SCARB1-207ENST00000541661 BVES-AS1Q5T3Y7 98 aa6.99□□□□□ -1.29
SCARB1-207ENST00000541661 Q5XG85 94 aa6.99□□□□□ -1.29
SCARB1-207ENST00000541661 NPC2P61916 151 aa6.98□□□□□ -1.29
SCARB1-207ENST00000541661 A0A0J9YXY3 114 aa6.97□□□□□ -1.29
SCARB1-207ENST00000541661 RPL37P61927 97 aaKnown RBP6.96□□□□□ -1.3
SCARB1-207ENST00000541661 C1orf195Q5TG92 126 aa6.95□□□□□ -1.3
SCARB1-207ENST00000541661 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms