RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 LINC00483Q53H64 154 aa13.49□□□□□ -0.25
LEMD3-203ENST00000541171 C20orf202A1L168 122 aa13.48□□□□□ -0.25
LEMD3-203ENST00000541171 S100A12P80511 92 aa13.48□□□□□ -0.25
LEMD3-203ENST00000541171 MOBPQ13875 183 aa13.48□□□□□ -0.25
LEMD3-203ENST00000541171 ERC2-IT1O76042 136 aa13.47□□□□□ -0.25
LEMD3-203ENST00000541171 B5MCH6 92 aa13.46□□□□□ -0.25
LEMD3-203ENST00000541171 AKR1D1P51857 326 aa13.46□□□□□ -0.25
LEMD3-203ENST00000541171 KRTAP4-1Q9BYQ7 146 aa13.45□□□□□ -0.26
LEMD3-203ENST00000541171 LOC107984156A0A0G2JMH3 177 aa13.44□□□□□ -0.26
LEMD3-203ENST00000541171 LINC01547P58512 204 aaPredicted RBP13.44□□□□□ -0.26
LEMD3-203ENST00000541171 ARL17AQ8IVW1 177 aa13.44□□□□□ -0.26
LEMD3-203ENST00000541171 DDTP30046 118 aa13.43□□□□□ -0.26
LEMD3-203ENST00000541171 SEC61BP60468 96 aaKnown RBP13.43□□□□□ -0.26
LEMD3-203ENST00000541171 HIST3H2BBQ8N257 126 aa13.43□□□□□ -0.26
LEMD3-203ENST00000541171 SSBP3-AS1Q7Z2R9 100 aa13.42□□□□□ -0.26
LEMD3-203ENST00000541171 A0A0J9YXY3 114 aa13.41□□□□□ -0.26
LEMD3-203ENST00000541171 Q8N377 158 aa13.41□□□□□ -0.26
LEMD3-203ENST00000541171 S100A6P06703 90 aa13.4□□□□□ -0.26
LEMD3-203ENST00000541171 S100A2P29034 98 aa13.4□□□□□ -0.26
LEMD3-203ENST00000541171 HIST1H2BLQ99880 126 aa13.39□□□□□ -0.27
LEMD3-203ENST00000541171 Q9BRP9 147 aa13.39□□□□□ -0.27
LEMD3-203ENST00000541171 MIEN1Q9BRT3 115 aa13.38□□□□□ -0.27
LEMD3-203ENST00000541171 RPS29P62273 56 aaKnown RBP13.37□□□□□ -0.27
LEMD3-203ENST00000541171 TRBV10-2A0A0K0K1G8 114 aa13.36□□□□□ -0.27
LEMD3-203ENST00000541171 SLC25A20O43772 301 aa13.36□□□□□ -0.27
LEMD3-203ENST00000541171 TIMM17BO60830 172 aa13.36□□□□□ -0.27
LEMD3-203ENST00000541171 Q6ZRX8 168 aa13.36□□□□□ -0.27
LEMD3-203ENST00000541171 ZNF815PA8K554 130 aa13.35□□□□□ -0.27
LEMD3-203ENST00000541171 NDUFC2O95298 119 aa13.34□□□□□ -0.27
LEMD3-203ENST00000541171 S100A7L2Q5SY68 101 aa13.34□□□□□ -0.27
LEMD3-203ENST00000541171 C9orf153Q5TBE3 101 aa13.34□□□□□ -0.27
LEMD3-203ENST00000541171 SPANXB1Q9NS25 103 aaPredicted RBP13.34□□□□□ -0.27
LEMD3-203ENST00000541171 SNRPEP62304 92 aaKnown RBP13.32□□□□□ -0.28
LEMD3-203ENST00000541171 ADAMTSL4-AS1Q5T5F5 129 aa13.32□□□□□ -0.28
LEMD3-203ENST00000541171 LITAFQ99732 161 aa13.32□□□□□ -0.28
LEMD3-203ENST00000541171 ANKRD39Q53RE8 183 aa13.31□□□□□ -0.28
LEMD3-203ENST00000541171 ATOH7Q8N100 152 aa13.31□□□□□ -0.28
LEMD3-203ENST00000541171 TTTY13Q9BZ97 58 aa13.3□□□□□ -0.28
LEMD3-203ENST00000541171 IGLV6-57P01721 117 aa13.29□□□□□ -0.28
LEMD3-203ENST00000541171 SOSTDC1Q6X4U4 206 aa13.29□□□□□ -0.28
LEMD3-203ENST00000541171 TRAV23DV6A0A075B6W5 121 aa13.28□□□□□ -0.28
LEMD3-203ENST00000541171 NPC2P61916 151 aa13.28□□□□□ -0.28
LEMD3-203ENST00000541171 JOSD1Q15040 202 aaPredicted RBP13.28□□□□□ -0.28
LEMD3-203ENST00000541171 XP32Q5T750 250 aa13.28□□□□□ -0.28
LEMD3-203ENST00000541171 ST20-AS1Q8NBB2 130 aa13.27□□□□□ -0.29
LEMD3-203ENST00000541171 C5orf52A6NGY3 159 aa13.26□□□□□ -0.29
LEMD3-203ENST00000541171 LINC00308Q8TCZ7 52 aa13.26□□□□□ -0.29
LEMD3-203ENST00000541171 EIF4EBP3O60516 100 aaPredicted RBP13.25□□□□□ -0.29
LEMD3-203ENST00000541171 SPANXCQ9NY87 97 aa13.25□□□□□ -0.29
LEMD3-203ENST00000541171 ZNF73O43830 326 aaPredicted RBP13.24□□□□□ -0.29
LEMD3-203ENST00000541171 SCGB1D4Q6XE38 83 aa13.24□□□□□ -0.29
LEMD3-203ENST00000541171 LCE2DQ5TA82 110 aaPredicted RBP13.22□□□□□ -0.29
LEMD3-203ENST00000541171 SPANXDQ9BXN6 97 aa13.22□□□□□ -0.29
LEMD3-203ENST00000541171 HSBP1L1C9JCN9 74 aa13.21□□□□□ -0.29
LEMD3-203ENST00000541171 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
LEMD3-203ENST00000541171 Q6ZVH6 145 aa13.19□□□□□ -0.3
LEMD3-203ENST00000541171 COPS9Q8WXC6 57 aa13.19□□□□□ -0.3
LEMD3-203ENST00000541171 CBY1Q9Y3M2 126 aa13.19□□□□□ -0.3
LEMD3-203ENST00000541171 HINT1P49773 126 aaPredicted RBP13.18□□□□□ -0.3
LEMD3-203ENST00000541171 HRCT1Q6UXD1 115 aa13.18□□□□□ -0.3
LEMD3-203ENST00000541171 FSIP2Q5CZC0 6907 aa13.17□□□□□ -0.3
LEMD3-203ENST00000541171 IFITM1P13164 125 aa13.16□□□□□ -0.3
LEMD3-203ENST00000541171 LCE2CQ5TA81 110 aa13.14□□□□□ -0.31
LEMD3-203ENST00000541171 LINC00518Q8N0U6 118 aa13.14□□□□□ -0.31
LEMD3-203ENST00000541171 OR13C6PQ8NH95 151 aa13.14□□□□□ -0.31
LEMD3-203ENST00000541171 SCGB1D1O95968 90 aa13.13□□□□□ -0.31
LEMD3-203ENST00000541171 LIMD2Q9BT23 127 aa13.12□□□□□ -0.31
LEMD3-203ENST00000541171 C9orf92A6NGG3 77 aa13.11□□□□□ -0.31
LEMD3-203ENST00000541171 PCOTHQ58A44 107 aa13.11□□□□□ -0.31
LEMD3-203ENST00000541171 SPRR1BP22528 89 aa13.09□□□□□ -0.31
LEMD3-203ENST00000541171 SLC25A34Q6PIV7 304 aa13.09□□□□□ -0.31
LEMD3-203ENST00000541171 IGLV8-61A0A075B6I0 122 aa13.08□□□□□ -0.32
LEMD3-203ENST00000541171 LAMTOR3Q9UHA4 124 aa13.08□□□□□ -0.32
LEMD3-203ENST00000541171 DHRS4-AS1Q9P1J3 65 aa13.07□□□□□ -0.32
LEMD3-203ENST00000541171 CRCT1Q9UGL9 99 aa13.07□□□□□ -0.32
LEMD3-203ENST00000541171 KRTAP19-2Q3LHN2 52 aa13.05□□□□□ -0.32
LEMD3-203ENST00000541171 MUSTN1Q8IVN3 82 aa13.05□□□□□ -0.32
LEMD3-203ENST00000541171 MT1HP80294 61 aa13.02□□□□□ -0.33
LEMD3-203ENST00000541171 DEFB105AQ8NG35 78 aa13.02□□□□□ -0.33
LEMD3-203ENST00000541171 COX8AP10176 69 aa13.01□□□□□ -0.33
LEMD3-203ENST00000541171 COX7BP24311 80 aa13.01□□□□□ -0.33
LEMD3-203ENST00000541171 TAL2Q16559 108 aa13.01□□□□□ -0.33
LEMD3-203ENST00000541171 Q1RN00 199 aa13.01□□□□□ -0.33
LEMD3-203ENST00000541171 DLEU1O43261 78 aa13□□□□□ -0.33
LEMD3-203ENST00000541171 C6orf99Q4VX62 202 aa12.99□□□□□ -0.33
LEMD3-203ENST00000541171 H7C2G1 150 aa12.98□□□□□ -0.33
LEMD3-203ENST00000541171 ELOF1P60002 83 aaKnown RBP12.98□□□□□ -0.33
LEMD3-203ENST00000541171 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
LEMD3-203ENST00000541171 TRBV7-6A0A0J9YX20 115 aa12.96□□□□□ -0.33
LEMD3-203ENST00000541171 A6NDN8 102 aa12.96□□□□□ -0.33
LEMD3-203ENST00000541171 VAMP8Q9BV40 100 aa12.96□□□□□ -0.33
LEMD3-203ENST00000541171 PRO1933Q9H354 126 aa12.96□□□□□ -0.33
LEMD3-203ENST00000541171 CD164Q04900 197 aa12.94□□□□□ -0.34
LEMD3-203ENST00000541171 SPATA45Q537H7 98 aa12.94□□□□□ -0.34
LEMD3-203ENST00000541171 PAM16Q9Y3D7 125 aa12.94□□□□□ -0.34
LEMD3-203ENST00000541171 TEX49A0A1B0GTD5 131 aa12.93□□□□□ -0.34
LEMD3-203ENST00000541171 CFC1BP0CG36 223 aa12.93□□□□□ -0.34
LEMD3-203ENST00000541171 A0A1B0GWB2 263 aa12.9□□□□□ -0.34
LEMD3-203ENST00000541171 A4D1N5 150 aa12.9□□□□□ -0.34
LEMD3-203ENST00000541171 HIST1H4GQ99525 98 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms