RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ETDCA0A1B0GVM5 59 aa9.39□□□□□ -0.91
DDB1-218ENST00000540784 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
DDB1-218ENST00000540784 SPRR1AP35321 89 aa9.39□□□□□ -0.91
DDB1-218ENST00000540784 KRTAP13-1Q8IUC0 172 aa9.39□□□□□ -0.91
DDB1-218ENST00000540784 LINC00337Q8N6G1 96 aa9.39□□□□□ -0.91
DDB1-218ENST00000540784 TRAV23DV6A0A075B6W5 121 aa9.38□□□□□ -0.91
DDB1-218ENST00000540784 A6NDN8 102 aa9.38□□□□□ -0.91
DDB1-218ENST00000540784 PRLHP81277 87 aa9.38□□□□□ -0.91
DDB1-218ENST00000540784 A4D1N5 150 aa9.36□□□□□ -0.91
DDB1-218ENST00000540784 KRTAP4-16G5E9R7 235 aaPredicted RBP9.36□□□□□ -0.91
DDB1-218ENST00000540784 J3QL48 77 aa9.36□□□□□ -0.91
DDB1-218ENST00000540784 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
DDB1-218ENST00000540784 TRAV13-2A0A0B4J235 113 aa9.35□□□□□ -0.91
DDB1-218ENST00000540784 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
DDB1-218ENST00000540784 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
DDB1-218ENST00000540784 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
DDB1-218ENST00000540784 LOC105371267A0A1B0GV96 52 aa9.34□□□□□ -0.91
DDB1-218ENST00000540784 B5MCH6 92 aa9.34□□□□□ -0.91
DDB1-218ENST00000540784 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
DDB1-218ENST00000540784 TAL2Q16559 108 aa9.33□□□□□ -0.92
DDB1-218ENST00000540784 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
DDB1-218ENST00000540784 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
DDB1-218ENST00000540784 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
DDB1-218ENST00000540784 SMCR5Q8TEV8 140 aa9.31□□□□□ -0.92
DDB1-218ENST00000540784 Q6ZRX8 168 aa9.3□□□□□ -0.92
DDB1-218ENST00000540784 CEND1Q8N111 149 aa9.3□□□□□ -0.92
DDB1-218ENST00000540784 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
DDB1-218ENST00000540784 C6orf99Q4VX62 202 aa9.29□□□□□ -0.92
DDB1-218ENST00000540784 C12orf57Q99622 126 aa9.29□□□□□ -0.92
DDB1-218ENST00000540784 LRP1Q07954 4544 aaKnown RBP9.29□□□□□ -0.92
DDB1-218ENST00000540784 FAT3Q8TDW7 4589 aa9.28□□□□□ -0.92
DDB1-218ENST00000540784 COX7BP24311 80 aa9.27□□□□□ -0.93
DDB1-218ENST00000540784 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
DDB1-218ENST00000540784 SMIM11BQ8TCY0 68 aa9.27□□□□□ -0.93
DDB1-218ENST00000540784 PRO1933Q9H354 126 aa9.27□□□□□ -0.93
DDB1-218ENST00000540784 TRBV7-6A0A0J9YX20 115 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 CFC1BP0CG36 223 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 CFC1P0CG37 223 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 HSD52Q0P140 79 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 PRR26Q8N8Z3 221 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 RAB37Q96AX2 223 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 Q9BRP9 147 aa9.26□□□□□ -0.93
DDB1-218ENST00000540784 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
DDB1-218ENST00000540784 RPL13AP40429 203 aaKnown RBP9.25□□□□□ -0.93
DDB1-218ENST00000540784 ANAPC11Q9NYG5 84 aa9.25□□□□□ -0.93
DDB1-218ENST00000540784 ERC2-IT1O76042 136 aa9.24□□□□□ -0.93
DDB1-218ENST00000540784 VAMP3Q15836 100 aa9.24□□□□□ -0.93
DDB1-218ENST00000540784 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
DDB1-218ENST00000540784 A0A1B0GWB2 263 aa9.23□□□□□ -0.93
DDB1-218ENST00000540784 CRYGAP11844 174 aa9.23□□□□□ -0.93
DDB1-218ENST00000540784 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
DDB1-218ENST00000540784 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
DDB1-218ENST00000540784 A0A0B4J2C4 111 aa9.22□□□□□ -0.93
DDB1-218ENST00000540784 FXYD2P54710 66 aa9.22□□□□□ -0.93
DDB1-218ENST00000540784 FAM229BQ4G0N7 80 aa9.22□□□□□ -0.93
DDB1-218ENST00000540784 H7C2G1 150 aa9.21□□□□□ -0.94
DDB1-218ENST00000540784 GAGE2AQ6NT46 116 aa9.2□□□□□ -0.94
DDB1-218ENST00000540784 PRO1854Q9UHT4 67 aa9.2□□□□□ -0.94
DDB1-218ENST00000540784 A0A087X002 238 aa9.19□□□□□ -0.94
DDB1-218ENST00000540784 DMBT1Q9UGM3 2413 aaPredicted RBP9.18□□□□□ -0.94
DDB1-218ENST00000540784 TSTD3H0UI37 97 aa9.17□□□□□ -0.94
DDB1-218ENST00000540784 TYMSOSQ8TAI1 123 aa9.17□□□□□ -0.94
DDB1-218ENST00000540784 NHP2Q9NX24 153 aaKnown RBP9.17□□□□□ -0.94
DDB1-218ENST00000540784 SLC25A20O43772 301 aa9.16□□□□□ -0.94
DDB1-218ENST00000540784 Q1RN00 199 aa9.16□□□□□ -0.94
DDB1-218ENST00000540784 LINC00483Q53H64 154 aa9.16□□□□□ -0.94
DDB1-218ENST00000540784 BVES-AS1Q5T3Y7 98 aa9.16□□□□□ -0.94
DDB1-218ENST00000540784 ST20-AS1Q8NBB2 130 aa9.16□□□□□ -0.94
DDB1-218ENST00000540784 CTAG1AP78358 180 aa9.15□□□□□ -0.94
DDB1-218ENST00000540784 TNXBP22105 4242 aa9.15□□□□□ -0.95
DDB1-218ENST00000540784 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
DDB1-218ENST00000540784 LINC00575Q6W349 94 aa9.14□□□□□ -0.95
DDB1-218ENST00000540784 DEFB105AQ8NG35 78 aa9.13□□□□□ -0.95
DDB1-218ENST00000540784 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
DDB1-218ENST00000540784 H0YGX0 51 aa9.11□□□□□ -0.95
DDB1-218ENST00000540784 K7ERJ3 54 aa9.11□□□□□ -0.95
DDB1-218ENST00000540784 M0R143 59 aa9.11□□□□□ -0.95
DDB1-218ENST00000540784 C3orf22Q8N5N4 141 aa9.11□□□□□ -0.95
DDB1-218ENST00000540784 TEX49A0A1B0GTD5 131 aa9.09□□□□□ -0.95
DDB1-218ENST00000540784 SNCGO76070 127 aa9.09□□□□□ -0.95
DDB1-218ENST00000540784 SPRR1BP22528 89 aa9.09□□□□□ -0.95
DDB1-218ENST00000540784 IGLV9-49A0A0B4J1Y8 123 aa9.08□□□□□ -0.96
DDB1-218ENST00000540784 PSMB2P49721 201 aa9.08□□□□□ -0.96
DDB1-218ENST00000540784 HERC1Q15751 4861 aa9.07□□□□□ -0.96
DDB1-218ENST00000540784 LAMTOR3Q9UHA4 124 aa9.07□□□□□ -0.96
DDB1-218ENST00000540784 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
DDB1-218ENST00000540784 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
DDB1-218ENST00000540784 TRIAP1O43715 76 aa9.05□□□□□ -0.96
DDB1-218ENST00000540784 TSPAN13O95857 204 aa9.05□□□□□ -0.96
DDB1-218ENST00000540784 COX6CP09669 75 aa9.05□□□□□ -0.96
DDB1-218ENST00000540784 LINC00304Q8N9R0 145 aa9.05□□□□□ -0.96
DDB1-218ENST00000540784 LINC01547P58512 204 aaPredicted RBP9.04□□□□□ -0.96
DDB1-218ENST00000540784 MOBPQ13875 183 aa9.04□□□□□ -0.96
DDB1-218ENST00000540784 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.04□□□□□ -0.96
DDB1-218ENST00000540784 Q6ZQY7 126 aa9.04□□□□□ -0.96
DDB1-218ENST00000540784 Q8N377 158 aa9.04□□□□□ -0.96
DDB1-218ENST00000540784 C9orf153Q5TBE3 101 aa9.03□□□□□ -0.96
DDB1-218ENST00000540784 Q8NBF4 154 aa9.03□□□□□ -0.96
DDB1-218ENST00000540784 SPAG11AQ6PDA7 123 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms