RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
UBE3B-212ENST00000540230 ERC2-IT1O76042 136 aa8.78□□□□□ -1
UBE3B-212ENST00000540230 PCP2Q8IVA1 136 aa8.78□□□□□ -1
UBE3B-212ENST00000540230 Q9BRP9 147 aa8.78□□□□□ -1
UBE3B-212ENST00000540230 SPANXCQ9NY87 97 aa8.78□□□□□ -1
UBE3B-212ENST00000540230 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
UBE3B-212ENST00000540230 S100A12P80511 92 aa8.77□□□□□ -1.01
UBE3B-212ENST00000540230 S100A2P29034 98 aa8.76□□□□□ -1.01
UBE3B-212ENST00000540230 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
UBE3B-212ENST00000540230 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
UBE3B-212ENST00000540230 SCGB1D4Q6XE38 83 aa8.75□□□□□ -1.01
UBE3B-212ENST00000540230 Q6ZRX8 168 aa8.75□□□□□ -1.01
UBE3B-212ENST00000540230 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
UBE3B-212ENST00000540230 SPANXDQ9BXN6 97 aa8.75□□□□□ -1.01
UBE3B-212ENST00000540230 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
UBE3B-212ENST00000540230 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
UBE3B-212ENST00000540230 S100A6P06703 90 aa8.74□□□□□ -1.01
UBE3B-212ENST00000540230 SNRPEP62304 92 aaKnown RBP8.74□□□□□ -1.01
UBE3B-212ENST00000540230 PRR4Q16378 134 aa8.74□□□□□ -1.01
UBE3B-212ENST00000540230 OR13C6PQ8NH95 151 aa8.73□□□□□ -1.01
UBE3B-212ENST00000540230 AKR1D1P51857 326 aa8.71□□□□□ -1.01
UBE3B-212ENST00000540230 LINC00483Q53H64 154 aa8.71□□□□□ -1.01
UBE3B-212ENST00000540230 GAGE2AQ6NT46 116 aa8.71□□□□□ -1.01
UBE3B-212ENST00000540230 RETNLBQ9BQ08 111 aa8.7□□□□□ -1.02
UBE3B-212ENST00000540230 C5orf52A6NGY3 159 aa8.69□□□□□ -1.02
UBE3B-212ENST00000540230 MUSTN1Q8IVN3 82 aa8.69□□□□□ -1.02
UBE3B-212ENST00000540230 ST20-AS1Q8NBB2 130 aa8.68□□□□□ -1.02
UBE3B-212ENST00000540230 JOSD1Q15040 202 aaPredicted RBP8.67□□□□□ -1.02
UBE3B-212ENST00000540230 LINC00518Q8N0U6 118 aa8.67□□□□□ -1.02
UBE3B-212ENST00000540230 IFITM1P13164 125 aa8.66□□□□□ -1.02
UBE3B-212ENST00000540230 Q8NBF4 154 aa8.66□□□□□ -1.02
UBE3B-212ENST00000540230 C6orf99Q4VX62 202 aa8.65□□□□□ -1.02
UBE3B-212ENST00000540230 Q6ZVH6 145 aa8.65□□□□□ -1.02
UBE3B-212ENST00000540230 IGLV9-49A0A0B4J1Y8 123 aa8.64□□□□□ -1.03
UBE3B-212ENST00000540230 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
UBE3B-212ENST00000540230 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
UBE3B-212ENST00000540230 SCGB1D1O95968 90 aa8.64□□□□□ -1.03
UBE3B-212ENST00000540230 HINT1P49773 126 aaPredicted RBP8.64□□□□□ -1.03
UBE3B-212ENST00000540230 MOBPQ13875 183 aa8.64□□□□□ -1.03
UBE3B-212ENST00000540230 LCE2BO14633 110 aa8.63□□□□□ -1.03
UBE3B-212ENST00000540230 ELOF1P60002 83 aaKnown RBP8.63□□□□□ -1.03
UBE3B-212ENST00000540230 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
UBE3B-212ENST00000540230 A6NDN8 102 aa8.61□□□□□ -1.03
UBE3B-212ENST00000540230 COX7BP24311 80 aa8.61□□□□□ -1.03
UBE3B-212ENST00000540230 SPAG11AQ6PDA7 123 aa8.61□□□□□ -1.03
UBE3B-212ENST00000540230 CTAG1AP78358 180 aa8.6□□□□□ -1.03
UBE3B-212ENST00000540230 DHRS4-AS1Q9P1J3 65 aa8.59□□□□□ -1.03
UBE3B-212ENST00000540230 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
UBE3B-212ENST00000540230 SSBP3-AS1Q7Z2R9 100 aa8.58□□□□□ -1.04
UBE3B-212ENST00000540230 SPRR1BP22528 89 aa8.57□□□□□ -1.04
UBE3B-212ENST00000540230 C9orf153Q5TBE3 101 aa8.57□□□□□ -1.04
UBE3B-212ENST00000540230 SMIM11BQ8TCY0 68 aa8.57□□□□□ -1.04
UBE3B-212ENST00000540230 MUC2Q02817 5179 aa8.56□□□□□ -1.04
UBE3B-212ENST00000540230 TRAV13-2A0A0B4J235 113 aa8.56□□□□□ -1.04
UBE3B-212ENST00000540230 A4D1N5 150 aa8.56□□□□□ -1.04
UBE3B-212ENST00000540230 COX8AP10176 69 aa8.56□□□□□ -1.04
UBE3B-212ENST00000540230 IGLV7-46A0A075B6I9 117 aa8.55□□□□□ -1.04
UBE3B-212ENST00000540230 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
UBE3B-212ENST00000540230 SPINK1P00995 79 aa8.55□□□□□ -1.04
UBE3B-212ENST00000540230 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
UBE3B-212ENST00000540230 A0A1B0GWB2 263 aa8.54□□□□□ -1.04
UBE3B-212ENST00000540230 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
UBE3B-212ENST00000540230 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
UBE3B-212ENST00000540230 C14orf144Q96I85 54 aa8.53□□□□□ -1.04
UBE3B-212ENST00000540230 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
UBE3B-212ENST00000540230 LINC01547P58512 204 aaPredicted RBP8.52□□□□□ -1.05
UBE3B-212ENST00000540230 TPRXLQ17RH7 258 aa8.52□□□□□ -1.05
UBE3B-212ENST00000540230 C12orf57Q99622 126 aa8.52□□□□□ -1.05
UBE3B-212ENST00000540230 DLEU1O43261 78 aa8.51□□□□□ -1.05
UBE3B-212ENST00000540230 Q1RN00 199 aa8.51□□□□□ -1.05
UBE3B-212ENST00000540230 SPATA45Q537H7 98 aa8.51□□□□□ -1.05
UBE3B-212ENST00000540230 Q8N377 158 aa8.51□□□□□ -1.05
UBE3B-212ENST00000540230 HIST1H4GQ99525 98 aa8.51□□□□□ -1.05
UBE3B-212ENST00000540230 TAL2Q16559 108 aa8.5□□□□□ -1.05
UBE3B-212ENST00000540230 RPS29P62273 56 aaKnown RBP8.49□□□□□ -1.05
UBE3B-212ENST00000540230 FP248Q71RG6 208 aaPredicted RBP8.49□□□□□ -1.05
UBE3B-212ENST00000540230 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
UBE3B-212ENST00000540230 VAMP8Q9BV40 100 aa8.49□□□□□ -1.05
UBE3B-212ENST00000540230 LAMTOR3Q9UHA4 124 aa8.49□□□□□ -1.05
UBE3B-212ENST00000540230 IGLV5-48A0A075B6I7 105 aa8.48□□□□□ -1.05
UBE3B-212ENST00000540230 TEX49A0A1B0GTD5 131 aa8.48□□□□□ -1.05
UBE3B-212ENST00000540230 SLC25A34Q6PIV7 304 aa8.48□□□□□ -1.05
UBE3B-212ENST00000540230 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
UBE3B-212ENST00000540230 CDIP1Q9H305 208 aa8.47□□□□□ -1.05
UBE3B-212ENST00000540230 HRCT1Q6UXD1 115 aa8.46□□□□□ -1.05
UBE3B-212ENST00000540230 KRTAP13-3Q3SY46 172 aa8.44□□□□□ -1.06
UBE3B-212ENST00000540230 PYY3Q5JQD4 70 aa8.44□□□□□ -1.06
UBE3B-212ENST00000540230 LINC00575Q6W349 94 aa8.44□□□□□ -1.06
UBE3B-212ENST00000540230 HIGD1BQ9P298 99 aa8.44□□□□□ -1.06
UBE3B-212ENST00000540230 TMA7Q9Y2S6 64 aaKnown RBP8.44□□□□□ -1.06
UBE3B-212ENST00000540230 A0A0G2JQZ4 141 aa8.44□□□□□ -1.06
UBE3B-212ENST00000540230 NHP2Q9NX24 153 aaKnown RBP8.44□□□□□ -1.06
UBE3B-212ENST00000540230 SLC25A20O43772 301 aa8.43□□□□□ -1.06
UBE3B-212ENST00000540230 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
UBE3B-212ENST00000540230 CFC1P0CG37 223 aa8.43□□□□□ -1.06
UBE3B-212ENST00000540230 VAMP3Q15836 100 aa8.42□□□□□ -1.06
UBE3B-212ENST00000540230 H7C2G1 150 aa8.4□□□□□ -1.06
UBE3B-212ENST00000540230 Q6ZQY7 126 aa8.4□□□□□ -1.06
UBE3B-212ENST00000540230 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
UBE3B-212ENST00000540230 hADV29S1A0JD25 119 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms