RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 C16orf90A8MZG2 172 aa6.59□□□□□ -1.35
SPARC-209ENST00000539687 GAGE2AQ6NT46 116 aa6.59□□□□□ -1.35
SPARC-209ENST00000539687 LINC00643Q86TS7 51 aa6.59□□□□□ -1.35
SPARC-209ENST00000539687 C7orf33Q8WU49 177 aa6.59□□□□□ -1.35
SPARC-209ENST00000539687 DHRS4-AS1Q9P1J3 65 aa6.59□□□□□ -1.35
SPARC-209ENST00000539687 LINC00474Q9P2X8 69 aa6.59□□□□□ -1.35
SPARC-209ENST00000539687 Q6ZQY7 126 aa6.58□□□□□ -1.36
SPARC-209ENST00000539687 MRPL55Q7Z7F7 128 aaKnown RBP6.58□□□□□ -1.36
SPARC-209ENST00000539687 KRTAP1-5Q9BYS1 174 aa6.58□□□□□ -1.36
SPARC-209ENST00000539687 IMUPQ9GZP8 106 aa6.58□□□□□ -1.36
SPARC-209ENST00000539687 TENM3Q9P273 2699 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 IGLV1-50A0A075B6I6 118 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 LOC110117498A0A087WWA1 95 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 MT-ATP8P03928 68 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 CCKP06307 115 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 RBM3P98179 157 aaKnown RBP6.57□□□□□ -1.36
SPARC-209ENST00000539687 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
SPARC-209ENST00000539687 ETDCA0A1B0GVM5 59 aa6.56□□□□□ -1.36
SPARC-209ENST00000539687 SPRR1AP35321 89 aa6.56□□□□□ -1.36
SPARC-209ENST00000539687 SDIM1Q6ZPB5 146 aa6.56□□□□□ -1.36
SPARC-209ENST00000539687 DSCR8Q96T75 97 aa6.56□□□□□ -1.36
SPARC-209ENST00000539687 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
SPARC-209ENST00000539687 XP32Q5T750 250 aa6.55□□□□□ -1.36
SPARC-209ENST00000539687 TRBV7-7A0A0K0K1E9 115 aa6.54□□□□□ -1.36
SPARC-209ENST00000539687 ATP5EP2Q5VTU8 51 aa6.54□□□□□ -1.36
SPARC-209ENST00000539687 Q6ZRX8 168 aa6.54□□□□□ -1.36
SPARC-209ENST00000539687 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
SPARC-209ENST00000539687 C9orf163Q8N9P6 203 aa6.53□□□□□ -1.36
SPARC-209ENST00000539687 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
SPARC-209ENST00000539687 LRCOL1A6NCL2 159 aa6.52□□□□□ -1.37
SPARC-209ENST00000539687 B5MCH6 92 aa6.52□□□□□ -1.37
SPARC-209ENST00000539687 REG3GQ6UW15 175 aa6.52□□□□□ -1.37
SPARC-209ENST00000539687 Q6ZRN7 208 aaPredicted RBP6.52□□□□□ -1.37
SPARC-209ENST00000539687 A0A096LNI7 61 aa6.51□□□□□ -1.37
SPARC-209ENST00000539687 KRTAP4-16G5E9R7 235 aaPredicted RBP6.51□□□□□ -1.37
SPARC-209ENST00000539687 NDUFV3P56181 108 aaKnown RBP6.51□□□□□ -1.37
SPARC-209ENST00000539687 Q6JHZ5 121 aa6.51□□□□□ -1.37
SPARC-209ENST00000539687 WWC2-AS2Q96NR7 200 aa6.51□□□□□ -1.37
SPARC-209ENST00000539687 KRTAP17-1Q9BYP8 105 aa6.51□□□□□ -1.37
SPARC-209ENST00000539687 UBL5Q9BZL1 73 aa6.51□□□□□ -1.37
SPARC-209ENST00000539687 EPPK1P58107 5090 aaKnown RBP6.5□□□□□ -1.37
SPARC-209ENST00000539687 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.5□□□□□ -1.37
SPARC-209ENST00000539687 A0A1B0GV72 72 aa6.5□□□□□ -1.37
SPARC-209ENST00000539687 A0A1B0GW54 56 aa6.5□□□□□ -1.37
SPARC-209ENST00000539687 FAM168BA1KXE4 195 aa6.5□□□□□ -1.37
SPARC-209ENST00000539687 Q6ZQT0 140 aa6.5□□□□□ -1.37
SPARC-209ENST00000539687 COL7A1Q02388 2944 aa6.49□□□□□ -1.37
SPARC-209ENST00000539687 RPL37AP8A6NKH3 93 aa6.49□□□□□ -1.37
SPARC-209ENST00000539687 DNAH1Q9P2D7 4330 aa6.49□□□□□ -1.37
SPARC-209ENST00000539687 DYNC2H1Q8NCM8 4307 aaKnown RBP6.49□□□□□ -1.37
SPARC-209ENST00000539687 IGLV5-48A0A075B6I7 105 aa6.48□□□□□ -1.37
SPARC-209ENST00000539687 IGKV2-24A0A0C4DH68 120 aa6.48□□□□□ -1.37
SPARC-209ENST00000539687 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
SPARC-209ENST00000539687 Q6ZR54 194 aa6.48□□□□□ -1.37
SPARC-209ENST00000539687 LINC00846Q9NV44 126 aa6.48□□□□□ -1.37
SPARC-209ENST00000539687 H0Y9J4 135 aa6.47□□□□□ -1.37
SPARC-209ENST00000539687 UBE2BP63146 152 aa6.47□□□□□ -1.37
SPARC-209ENST00000539687 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
SPARC-209ENST00000539687 SMCR5Q8TEV8 140 aa6.47□□□□□ -1.37
SPARC-209ENST00000539687 A0A087WTM6 91 aa6.46□□□□□ -1.38
SPARC-209ENST00000539687 C1orf134Q5TEV5 83 aa6.45□□□□□ -1.38
SPARC-209ENST00000539687 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
SPARC-209ENST00000539687 RYR2Q92736 4967 aa6.45□□□□□ -1.38
SPARC-209ENST00000539687 A0A1W2PNN7 141 aa6.44□□□□□ -1.38
SPARC-209ENST00000539687 M0R2N4 97 aa6.44□□□□□ -1.38
SPARC-209ENST00000539687 FAM19A1Q7Z5A9 133 aa6.44□□□□□ -1.38
SPARC-209ENST00000539687 Q9BRP9 147 aa6.44□□□□□ -1.38
SPARC-209ENST00000539687 F8WEM9 126 aa6.43□□□□□ -1.38
SPARC-209ENST00000539687 C3orf84H3BNL1 204 aa6.43□□□□□ -1.38
SPARC-209ENST00000539687 Q8N377 158 aa6.43□□□□□ -1.38
SPARC-209ENST00000539687 EPM2AB3EWF7 344 aa6.42□□□□□ -1.38
SPARC-209ENST00000539687 FUSP35637 526 aaKnown RBP eCLIP6.42□□□□□ -1.38
SPARC-209ENST00000539687 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
SPARC-209ENST00000539687 SPACA4Q8TDM5 124 aa6.42□□□□□ -1.38
SPARC-209ENST00000539687 RTL8CO15255 209 aa6.41□□□□□ -1.38
SPARC-209ENST00000539687 LINC01547P58512 204 aaPredicted RBP6.41□□□□□ -1.38
SPARC-209ENST00000539687 CXCL6P80162 114 aa6.41□□□□□ -1.38
SPARC-209ENST00000539687 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
SPARC-209ENST00000539687 LY6G6CO95867 125 aa6.4□□□□□ -1.38
SPARC-209ENST00000539687 LINC00476Q8WZB0 136 aa6.4□□□□□ -1.38
SPARC-209ENST00000539687 IGLV5-52A0A0A0MRZ9 124 aa6.39□□□□□ -1.39
SPARC-209ENST00000539687 FAM236AA0A1B0GUQ0 79 aa6.39□□□□□ -1.39
SPARC-209ENST00000539687 FAM236BA0A1B0GV22 79 aa6.39□□□□□ -1.39
SPARC-209ENST00000539687 ATOX1O00244 68 aa6.39□□□□□ -1.39
SPARC-209ENST00000539687 BCE1O60756 84 aa6.39□□□□□ -1.39
SPARC-209ENST00000539687 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
SPARC-209ENST00000539687 UBE2AP49459 152 aa6.39□□□□□ -1.39
SPARC-209ENST00000539687 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
SPARC-209ENST00000539687 STAB2Q8WWQ8 2551 aa6.38□□□□□ -1.39
SPARC-209ENST00000539687 IGKV3D-7A0A0C4DH55 119 aa6.38□□□□□ -1.39
SPARC-209ENST00000539687 Q6ZVQ6 151 aa6.38□□□□□ -1.39
SPARC-209ENST00000539687 SACSQ9NZJ4 4579 aa6.38□□□□□ -1.39
SPARC-209ENST00000539687 SPRR1BP22528 89 aa6.37□□□□□ -1.39
SPARC-209ENST00000539687 C1orf137Q5JT78 98 aa6.37□□□□□ -1.39
SPARC-209ENST00000539687 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
SPARC-209ENST00000539687 ERC2-IT1O76042 136 aa6.36□□□□□ -1.39
SPARC-209ENST00000539687 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
SPARC-209ENST00000539687 PRLHP81277 87 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms