RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 INAFM1C9JVW0 142 aa6.35□□□□□ -1.39
CDH13-204ENST00000539548 NDUFC1O43677 76 aa6.35□□□□□ -1.39
CDH13-204ENST00000539548 Q6ZRP5 223 aa6.35□□□□□ -1.39
CDH13-204ENST00000539548 SNURFQ9Y675 71 aa6.35□□□□□ -1.39
CDH13-204ENST00000539548 ESRGQ1W209 222 aa6.34□□□□□ -1.39
CDH13-204ENST00000539548 KCNQ1DNQ9H478 68 aa6.34□□□□□ -1.39
CDH13-204ENST00000539548 NBEAL1Q6ZS30 2694 aa6.34□□□□□ -1.39
CDH13-204ENST00000539548 ERC2-IT1O76042 136 aa6.34□□□□□ -1.4
CDH13-204ENST00000539548 MDFIQ99750 246 aa6.34□□□□□ -1.4
CDH13-204ENST00000539548 C1orf43Q9BWL3 253 aa6.34□□□□□ -1.4
CDH13-204ENST00000539548 F8WEM9 126 aa6.33□□□□□ -1.4
CDH13-204ENST00000539548 BPY2O14599 106 aa6.33□□□□□ -1.4
CDH13-204ENST00000539548 SYCNQ0VAF6 134 aa6.33□□□□□ -1.4
CDH13-204ENST00000539548 NREPQ16612 68 aa6.33□□□□□ -1.4
CDH13-204ENST00000539548 FBN1P35555 2871 aaKnown RBP6.32□□□□□ -1.4
CDH13-204ENST00000539548 IGKV4-1P06312 121 aa6.32□□□□□ -1.4
CDH13-204ENST00000539548 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
CDH13-204ENST00000539548 Q6ZTC4 211 aa6.32□□□□□ -1.4
CDH13-204ENST00000539548 HRCT1Q6UXD1 115 aa6.31□□□□□ -1.4
CDH13-204ENST00000539548 NKAPP1Q8N9T2 125 aa6.31□□□□□ -1.4
CDH13-204ENST00000539548 IGLV5-48A0A075B6I7 105 aa6.31□□□□□ -1.4
CDH13-204ENST00000539548 IGKV2D-24A0A075B6R9 120 aa6.31□□□□□ -1.4
CDH13-204ENST00000539548 Q8N377 158 aa6.31□□□□□ -1.4
CDH13-204ENST00000539548 C7orf33Q8WU49 177 aa6.31□□□□□ -1.4
CDH13-204ENST00000539548 RETNQ9HD89 108 aa6.31□□□□□ -1.4
CDH13-204ENST00000539548 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
CDH13-204ENST00000539548 PLA2G2DQ9UNK4 145 aa6.3□□□□□ -1.4
CDH13-204ENST00000539548 A0A1B0GW54 56 aa6.3□□□□□ -1.4
CDH13-204ENST00000539548 SERTAD4-AS1Q5TG53 156 aa6.3□□□□□ -1.4
CDH13-204ENST00000539548 Q8N9L7 120 aa6.3□□□□□ -1.4
CDH13-204ENST00000539548 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
CDH13-204ENST00000539548 TENM1Q9UKZ4 2725 aa6.29□□□□□ -1.4
CDH13-204ENST00000539548 TLX1NBP0CAT3 122 aa6.29□□□□□ -1.4
CDH13-204ENST00000539548 OCR1Q9BZK8 76 aa6.29□□□□□ -1.4
CDH13-204ENST00000539548 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
CDH13-204ENST00000539548 DEFB105AQ8NG35 78 aa6.28□□□□□ -1.4
CDH13-204ENST00000539548 SMIM26A0A096LP01 95 aa6.28□□□□□ -1.4
CDH13-204ENST00000539548 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
CDH13-204ENST00000539548 C3orf84H3BNL1 204 aa6.27□□□□□ -1.41
CDH13-204ENST00000539548 KRTAP10-11P60412 298 aa6.27□□□□□ -1.41
CDH13-204ENST00000539548 IGLV5-37A0A075B6J1 123 aa6.27□□□□□ -1.41
CDH13-204ENST00000539548 Q6ZRX8 168 aa6.27□□□□□ -1.41
CDH13-204ENST00000539548 DEFB131BA0A096LNP1 70 aa6.26□□□□□ -1.41
CDH13-204ENST00000539548 A0A0U1RQV1 116 aa6.26□□□□□ -1.41
CDH13-204ENST00000539548 PRYO14603 147 aa6.26□□□□□ -1.41
CDH13-204ENST00000539548 DNAH10OSP0CZ25 163 aa6.26□□□□□ -1.41
CDH13-204ENST00000539548 IGLV1-50A0A075B6I6 118 aa6.25□□□□□ -1.41
CDH13-204ENST00000539548 SPRR1AP35321 89 aa6.25□□□□□ -1.41
CDH13-204ENST00000539548 FUSP35637 526 aaKnown RBP eCLIP6.25□□□□□ -1.41
CDH13-204ENST00000539548 OXLD1Q5BKU9 147 aa6.25□□□□□ -1.41
CDH13-204ENST00000539548 A0A1W2PNM2 257 aa6.25□□□□□ -1.41
CDH13-204ENST00000539548 Q9BRP9 147 aa6.25□□□□□ -1.41
CDH13-204ENST00000539548 TNP2Q05952 138 aa6.24□□□□□ -1.41
CDH13-204ENST00000539548 FP248Q71RG6 208 aaPredicted RBP6.24□□□□□ -1.41
CDH13-204ENST00000539548 RPL37AP8A6NKH3 93 aa6.24□□□□□ -1.41
CDH13-204ENST00000539548 C11orf45Q8TAV5 145 aa6.24□□□□□ -1.41
CDH13-204ENST00000539548 ETDCA0A1B0GVM5 59 aa6.23□□□□□ -1.41
CDH13-204ENST00000539548 MRAPQ8TCY5 172 aa6.23□□□□□ -1.41
CDH13-204ENST00000539548 C1orf137Q5JT78 98 aa6.23□□□□□ -1.41
CDH13-204ENST00000539548 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
CDH13-204ENST00000539548 Q8NBF4 154 aa6.22□□□□□ -1.41
CDH13-204ENST00000539548 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
CDH13-204ENST00000539548 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.41
CDH13-204ENST00000539548 ST20-AS1Q8NBB2 130 aa6.21□□□□□ -1.42
CDH13-204ENST00000539548 LCE6AA0A183 80 aa6.2□□□□□ -1.42
CDH13-204ENST00000539548 HIGD2AQ9BW72 106 aa6.2□□□□□ -1.42
CDH13-204ENST00000539548 SMIM29Q86T20 159 aa6.2□□□□□ -1.42
CDH13-204ENST00000539548 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
CDH13-204ENST00000539548 CASC10Q5T4H9 136 aa6.19□□□□□ -1.42
CDH13-204ENST00000539548 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
CDH13-204ENST00000539548 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
CDH13-204ENST00000539548 PKD1L1Q8TDX9 2849 aa6.19□□□□□ -1.42
CDH13-204ENST00000539548 LINC00588Q9Y4M8 146 aa6.18□□□□□ -1.42
CDH13-204ENST00000539548 DSCR10P59022 87 aa6.18□□□□□ -1.42
CDH13-204ENST00000539548 LINC00336Q6ZUF6 198 aa6.18□□□□□ -1.42
CDH13-204ENST00000539548 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
CDH13-204ENST00000539548 UBE2BP63146 152 aa6.17□□□□□ -1.42
CDH13-204ENST00000539548 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
CDH13-204ENST00000539548 REG3GQ6UW15 175 aa6.16□□□□□ -1.42
CDH13-204ENST00000539548 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.43
CDH13-204ENST00000539548 TENM3Q9P273 2699 aa6.15□□□□□ -1.43
CDH13-204ENST00000539548 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
CDH13-204ENST00000539548 ANK2Q01484 3957 aa6.14□□□□□ -1.43
CDH13-204ENST00000539548 K7EQZ3 153 aa6.14□□□□□ -1.43
CDH13-204ENST00000539548 LINC00476Q8WZB0 136 aa6.14□□□□□ -1.43
CDH13-204ENST00000539548 IGLV8-61A0A075B6I0 122 aa6.11□□□□□ -1.43
CDH13-204ENST00000539548 HCG22E2RYF7 251 aa6.11□□□□□ -1.43
CDH13-204ENST00000539548 hDV103S1A0JD37 113 aa6.11□□□□□ -1.43
CDH13-204ENST00000539548 KRTAP24-1Q3LI83 254 aa6.11□□□□□ -1.43
CDH13-204ENST00000539548 IGFL1Q6UW32 110 aa6.11□□□□□ -1.43
CDH13-204ENST00000539548 PSCAO43653 123 aa6.1□□□□□ -1.43
CDH13-204ENST00000539548 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.1□□□□□ -1.43
CDH13-204ENST00000539548 MPLKIPQ8TAP9 179 aa6.1□□□□□ -1.43
CDH13-204ENST00000539548 DNAH1Q9P2D7 4330 aa6.09□□□□□ -1.43
CDH13-204ENST00000539548 A0A0G2JQZ4 141 aa6.08□□□□□ -1.44
CDH13-204ENST00000539548 A0A1W2PNN7 141 aa6.08□□□□□ -1.44
CDH13-204ENST00000539548 C16orf90A8MZG2 172 aa6.08□□□□□ -1.44
CDH13-204ENST00000539548 A0A096LNI7 61 aa6.07□□□□□ -1.44
CDH13-204ENST00000539548 MGAM2Q2M2H8 2515 aa6.07□□□□□ -1.44
CDH13-204ENST00000539548 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms