RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 C20orf202A1L168 122 aa12.72□□□□□ -0.37
SCARB1-206ENST00000539320 CDIP1Q9H305 208 aa12.72□□□□□ -0.37
SCARB1-206ENST00000539320 B5MCH6 92 aa12.71□□□□□ -0.37
SCARB1-206ENST00000539320 SCGB1D1O95968 90 aa12.71□□□□□ -0.37
SCARB1-206ENST00000539320 LINC00483Q53H64 154 aa12.71□□□□□ -0.37
SCARB1-206ENST00000539320 C4orf48Q5BLP8 95 aa12.71□□□□□ -0.37
SCARB1-206ENST00000539320 LINC01545Q5VT33 79 aa12.71□□□□□ -0.37
SCARB1-206ENST00000539320 Q8NBF4 154 aa12.71□□□□□ -0.37
SCARB1-206ENST00000539320 ATOH7Q8N100 152 aa12.7□□□□□ -0.38
SCARB1-206ENST00000539320 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
SCARB1-206ENST00000539320 NDUFC2O95298 119 aa12.68□□□□□ -0.38
SCARB1-206ENST00000539320 GAGE2AQ6NT46 116 aa12.68□□□□□ -0.38
SCARB1-206ENST00000539320 Q6ZRX8 168 aa12.67□□□□□ -0.38
SCARB1-206ENST00000539320 E9PLD3 99 aa12.66□□□□□ -0.38
SCARB1-206ENST00000539320 ERC2-IT1O76042 136 aa12.66□□□□□ -0.38
SCARB1-206ENST00000539320 IGLV6-57P01721 117 aa12.66□□□□□ -0.38
SCARB1-206ENST00000539320 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
SCARB1-206ENST00000539320 FP248Q71RG6 208 aaPredicted RBP12.66□□□□□ -0.38
SCARB1-206ENST00000539320 A0A0J9YXY3 114 aa12.65□□□□□ -0.38
SCARB1-206ENST00000539320 SOSTDC1Q6X4U4 206 aa12.65□□□□□ -0.38
SCARB1-206ENST00000539320 Q9BRP9 147 aa12.65□□□□□ -0.38
SCARB1-206ENST00000539320 NPC2P61916 151 aa12.64□□□□□ -0.39
SCARB1-206ENST00000539320 JOSD1Q15040 202 aaPredicted RBP12.64□□□□□ -0.39
SCARB1-206ENST00000539320 TRAV23DV6A0A075B6W5 121 aa12.63□□□□□ -0.39
SCARB1-206ENST00000539320 MOBPQ13875 183 aa12.62□□□□□ -0.39
SCARB1-206ENST00000539320 PYY3Q5JQD4 70 aa12.62□□□□□ -0.39
SCARB1-206ENST00000539320 ADAMTSL4-AS1Q5T5F5 129 aa12.62□□□□□ -0.39
SCARB1-206ENST00000539320 FAT4Q6V0I7 4981 aa12.62□□□□□ -0.39
SCARB1-206ENST00000539320 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-206ENST00000539320 SPINK1P00995 79 aa12.61□□□□□ -0.39
SCARB1-206ENST00000539320 IGLV9-49A0A0B4J1Y8 123 aa12.6□□□□□ -0.39
SCARB1-206ENST00000539320 ZNF73O43830 326 aaPredicted RBP12.58□□□□□ -0.4
SCARB1-206ENST00000539320 SSBP3-AS1Q7Z2R9 100 aa12.57□□□□□ -0.4
SCARB1-206ENST00000539320 RPS29P62273 56 aaKnown RBP12.55□□□□□ -0.4
SCARB1-206ENST00000539320 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
SCARB1-206ENST00000539320 LITAFQ99732 161 aa12.55□□□□□ -0.4
SCARB1-206ENST00000539320 CBY1Q9Y3M2 126 aa12.55□□□□□ -0.4
SCARB1-206ENST00000539320 TIMM17BO60830 172 aa12.54□□□□□ -0.4
SCARB1-206ENST00000539320 KRTAP13-3Q3SY46 172 aa12.54□□□□□ -0.4
SCARB1-206ENST00000539320 LINC00308Q8TCZ7 52 aa12.54□□□□□ -0.4
SCARB1-206ENST00000539320 SPANXCQ9NY87 97 aa12.54□□□□□ -0.4
SCARB1-206ENST00000539320 HSBP1L1C9JCN9 74 aa12.53□□□□□ -0.4
SCARB1-206ENST00000539320 VAMP8Q9BV40 100 aa12.52□□□□□ -0.41
SCARB1-206ENST00000539320 PAM16Q9Y3D7 125 aa12.52□□□□□ -0.41
SCARB1-206ENST00000539320 ZNF815PA8K554 130 aa12.51□□□□□ -0.41
SCARB1-206ENST00000539320 HINT1P49773 126 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-206ENST00000539320 C9orf153Q5TBE3 101 aa12.51□□□□□ -0.41
SCARB1-206ENST00000539320 Q8N377 158 aa12.49□□□□□ -0.41
SCARB1-206ENST00000539320 ST20-AS1Q8NBB2 130 aa12.49□□□□□ -0.41
SCARB1-206ENST00000539320 OR13C6PQ8NH95 151 aa12.49□□□□□ -0.41
SCARB1-206ENST00000539320 SMIM6P0DI80 62 aa12.48□□□□□ -0.41
SCARB1-206ENST00000539320 SPATA45Q537H7 98 aa12.48□□□□□ -0.41
SCARB1-206ENST00000539320 TTTY13Q9BZ97 58 aa12.48□□□□□ -0.41
SCARB1-206ENST00000539320 SPANXDQ9BXN6 97 aa12.47□□□□□ -0.41
SCARB1-206ENST00000539320 LCE2AQ5TA79 106 aaPredicted RBP12.46□□□□□ -0.41
SCARB1-206ENST00000539320 SLC25A20O43772 301 aa12.45□□□□□ -0.42
SCARB1-206ENST00000539320 PCP2Q8IVA1 136 aa12.44□□□□□ -0.42
SCARB1-206ENST00000539320 DHRS4-AS1Q9P1J3 65 aa12.43□□□□□ -0.42
SCARB1-206ENST00000539320 C12orf57Q99622 126 aa12.42□□□□□ -0.42
SCARB1-206ENST00000539320 SPRR1BP22528 89 aa12.41□□□□□ -0.42
SCARB1-206ENST00000539320 ASB16-AS1Q495Z4 193 aa12.41□□□□□ -0.42
SCARB1-206ENST00000539320 LINC00518Q8N0U6 118 aa12.4□□□□□ -0.42
SCARB1-206ENST00000539320 C14orf144Q96I85 54 aa12.4□□□□□ -0.42
SCARB1-206ENST00000539320 SLC25A34Q6PIV7 304 aa12.39□□□□□ -0.43
SCARB1-206ENST00000539320 COX7BP24311 80 aa12.38□□□□□ -0.43
SCARB1-206ENST00000539320 ELOF1P60002 83 aaKnown RBP12.38□□□□□ -0.43
SCARB1-206ENST00000539320 C6orf99Q4VX62 202 aa12.38□□□□□ -0.43
SCARB1-206ENST00000539320 SCGB1D4Q6XE38 83 aa12.38□□□□□ -0.43
SCARB1-206ENST00000539320 COX8AP10176 69 aa12.36□□□□□ -0.43
SCARB1-206ENST00000539320 PRO1933Q9H354 126 aa12.36□□□□□ -0.43
SCARB1-206ENST00000539320 SEC61BP60468 96 aaKnown RBP12.35□□□□□ -0.43
SCARB1-206ENST00000539320 LAMTOR3Q9UHA4 124 aa12.35□□□□□ -0.43
SCARB1-206ENST00000539320 COPS9Q8WXC6 57 aa12.34□□□□□ -0.43
SCARB1-206ENST00000539320 LIMD2Q9BT23 127 aa12.32□□□□□ -0.44
SCARB1-206ENST00000539320 IFITM1P13164 125 aa12.31□□□□□ -0.44
SCARB1-206ENST00000539320 TRBV7-6A0A0J9YX20 115 aa12.29□□□□□ -0.44
SCARB1-206ENST00000539320 XP32Q5T750 250 aa12.29□□□□□ -0.44
SCARB1-206ENST00000539320 HRCT1Q6UXD1 115 aa12.29□□□□□ -0.44
SCARB1-206ENST00000539320 Q6ZVH6 145 aa12.29□□□□□ -0.44
SCARB1-206ENST00000539320 TAL2Q16559 108 aa12.28□□□□□ -0.44
SCARB1-206ENST00000539320 A0A1B0GWB2 263 aa12.27□□□□□ -0.45
SCARB1-206ENST00000539320 DLEU1O43261 78 aa12.27□□□□□ -0.45
SCARB1-206ENST00000539320 Q1RN00 199 aa12.27□□□□□ -0.45
SCARB1-206ENST00000539320 DEFB105AQ8NG35 78 aa12.27□□□□□ -0.45
SCARB1-206ENST00000539320 KRTAP9-2Q9BYQ4 174 aa12.27□□□□□ -0.45
SCARB1-206ENST00000539320 TEX49A0A1B0GTD5 131 aa12.26□□□□□ -0.45
SCARB1-206ENST00000539320 A6NDN8 102 aa12.26□□□□□ -0.45
SCARB1-206ENST00000539320 KRTAP4-1Q9BYQ7 146 aa12.26□□□□□ -0.45
SCARB1-206ENST00000539320 UQCR10Q9UDW1 63 aa12.26□□□□□ -0.45
SCARB1-206ENST00000539320 C2orf91Q6ZV80 131 aa12.24□□□□□ -0.45
SCARB1-206ENST00000539320 MUSTN1Q8IVN3 82 aa12.24□□□□□ -0.45
SCARB1-206ENST00000539320 TSTD3H0UI37 97 aa12.22□□□□□ -0.45
SCARB1-206ENST00000539320 CD164Q04900 197 aa12.22□□□□□ -0.45
SCARB1-206ENST00000539320 IGLV5-48A0A075B6I7 105 aa12.2□□□□□ -0.46
SCARB1-206ENST00000539320 TRAV13-2A0A0B4J235 113 aa12.19□□□□□ -0.46
SCARB1-206ENST00000539320 LINC01547P58512 204 aaPredicted RBP12.19□□□□□ -0.46
SCARB1-206ENST00000539320 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
SCARB1-206ENST00000539320 A4D1N5 150 aa12.18□□□□□ -0.46
SCARB1-206ENST00000539320 H7C2G1 150 aa12.17□□□□□ -0.46
SCARB1-206ENST00000539320 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms