RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ATP7BP35670 1465 aa-0.41□□□□□ -2.48
CCDC7-209ENST00000539197 AKAP13Q12802 2813 aa-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 LRRC7Q96NW7 1537 aa-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 MYMXA0A1B0GTQ4 84 aa-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 S100A16Q96FQ6 103 aaKnown RBP-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 V9GYS6 101 aa-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 CEP162Q5TB80 1403 aa-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 STAB2Q8WWQ8 2551 aa-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 KIAA1551Q9HCM1 1747 aa-0.42□□□□□ -2.48
CCDC7-209ENST00000539197 HERC1Q15751 4861 aa-0.43□□□□□ -2.48
CCDC7-209ENST00000539197 CRYBG1Q9Y4K1 1723 aa-0.43□□□□□ -2.48
CCDC7-209ENST00000539197 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.43□□□□□ -2.48
CCDC7-209ENST00000539197 TROQ12816 1431 aaPredicted RBP-0.43□□□□□ -2.48
CCDC7-209ENST00000539197 RPL38P63173 70 aaKnown RBP-0.43□□□□□ -2.48
CCDC7-209ENST00000539197 ANKRD36A6QL64 1941 aa-0.43□□□□□ -2.48
CCDC7-209ENST00000539197 LAMA5O15230 3695 aa-0.43□□□□□ -2.48
CCDC7-209ENST00000539197 SETD2Q9BYW2 2564 aaPredicted RBP-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 TRANK1O15050 2925 aa-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 TGP01266 2768 aa-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 SNRPFP62306 86 aaKnown RBP-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 COX6B2Q6YFQ2 88 aa-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 WFDC9Q8NEX5 89 aa-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 ANKRD26Q9UPS8 1709 aa-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 KNL1Q8NG31 2342 aa-0.44□□□□□ -2.48
CCDC7-209ENST00000539197 PLIN4Q96Q06 1357 aa-0.45□□□□□ -2.48
CCDC7-209ENST00000539197 LRRC9Q6ZRR7 1453 aa-0.45□□□□□ -2.48
CCDC7-209ENST00000539197 CEBPZOSA8MTT3 80 aa-0.45□□□□□ -2.48
CCDC7-209ENST00000539197 H0YGG7 62 aa-0.45□□□□□ -2.48
CCDC7-209ENST00000539197 LINC00643Q86TS7 51 aa-0.45□□□□□ -2.48
CCDC7-209ENST00000539197 PRRC2CQ9Y520 2896 aaKnown RBP-0.45□□□□□ -2.48
CCDC7-209ENST00000539197 PKD1P98161 4303 aa-0.46□□□□□ -2.48
CCDC7-209ENST00000539197 RGPD2P0DJD1 1756 aa-0.46□□□□□ -2.48
CCDC7-209ENST00000539197 PVALEFA0A1B0GWK0 134 aa-0.46□□□□□ -2.48
CCDC7-209ENST00000539197 TDRG1Q3Y452 100 aa-0.46□□□□□ -2.48
CCDC7-209ENST00000539197 ADAMTS12P58397 1594 aa-0.47□□□□□ -2.48
CCDC7-209ENST00000539197 STARD9Q9P2P6 4700 aa-0.47□□□□□ -2.48
CCDC7-209ENST00000539197 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
CCDC7-209ENST00000539197 KRTAP19-8Q3LI54 63 aa-0.47□□□□□ -2.48
CCDC7-209ENST00000539197 RABAC1Q9UI14 185 aa-0.47□□□□□ -2.48
CCDC7-209ENST00000539197 CICQ96RK0 1608 aaPredicted RBP-0.47□□□□□ -2.48
CCDC7-209ENST00000539197 PTPN23Q9H3S7 1636 aa-0.47□□□□□ -2.48
CCDC7-209ENST00000539197 HECTD1Q9ULT8 2610 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 NF1P21359 2839 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 MYO3AQ8NEV4 1616 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 ALKQ9UM73 1620 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 RGPD1P0DJD0 1748 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 AKAP12Q02952 1782 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 BCORQ6W2J9 1755 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 LYSTQ99698 3801 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 FAT1Q14517 4588 aa-0.48□□□□□ -2.49
CCDC7-209ENST00000539197 USP32Q8NFA0 1604 aa-0.49□□□□□ -2.49
CCDC7-209ENST00000539197 COL14A1Q05707 1796 aaKnown RBP-0.49□□□□□ -2.49
CCDC7-209ENST00000539197 TNRC18O15417 2968 aaPredicted RBP-0.49□□□□□ -2.49
CCDC7-209ENST00000539197 KIF20BQ96Q89 1820 aa-0.49□□□□□ -2.49
CCDC7-209ENST00000539197 UBR3Q6ZT12 1888 aa-0.49□□□□□ -2.49
CCDC7-209ENST00000539197 MYH4Q9Y623 1939 aa-0.49□□□□□ -2.49
CCDC7-209ENST00000539197 PREX1Q8TCU6 1659 aa-0.49□□□□□ -2.49
CCDC7-209ENST00000539197 SONP18583 2426 aaKnown RBP-0.5□□□□□ -2.49
CCDC7-209ENST00000539197 NDUFB1O75438 58 aa-0.5□□□□□ -2.49
CCDC7-209ENST00000539197 ACYP1P07311 99 aa-0.5□□□□□ -2.49
CCDC7-209ENST00000539197 NCOA2Q15596 1464 aa-0.5□□□□□ -2.49
CCDC7-209ENST00000539197 QSER1Q2KHR3 1735 aa-0.5□□□□□ -2.49
CCDC7-209ENST00000539197 PKD1L3Q7Z443 1732 aa-0.5□□□□□ -2.49
CCDC7-209ENST00000539197 NBEAL2Q6ZNJ1 2754 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 NBPF19A0A087WUL8 3843 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 LINC00158P58513 81 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 UBR1Q8IWV7 1749 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 DNAH6Q9C0G6 4158 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 PRO3102Q9H379 93 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 MXRA5Q9NR99 2828 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 DNAH9Q9NYC9 4486 aa-0.51□□□□□ -2.49
CCDC7-209ENST00000539197 NBASA2RRP1 2371 aa-0.52□□□□□ -2.49
CCDC7-209ENST00000539197 PDE4DIPQ5VU43 2346 aa-0.52□□□□□ -2.49
CCDC7-209ENST00000539197 C3orf79P0CE67 100 aa-0.52□□□□□ -2.49
CCDC7-209ENST00000539197 CREBBPQ92793 2442 aa-0.53□□□□□ -2.49
CCDC7-209ENST00000539197 TTC37Q6PGP7 1564 aa-0.53□□□□□ -2.49
CCDC7-209ENST00000539197 ABCC3O15438 1527 aa-0.53□□□□□ -2.49
CCDC7-209ENST00000539197 FAT3Q8TDW7 4589 aa-0.53□□□□□ -2.49
CCDC7-209ENST00000539197 H3BNG1 76 aa-0.53□□□□□ -2.49
CCDC7-209ENST00000539197 IFI6P09912 130 aa-0.53□□□□□ -2.49
CCDC7-209ENST00000539197 DEFA5Q01523 94 aa-0.53□□□□□ -2.49
CCDC7-209ENST00000539197 CUBNO60494 3623 aa-0.53□□□□□ -2.5
CCDC7-209ENST00000539197 KANTRA0A1W2PQU2 76 aa-0.54□□□□□ -2.5
CCDC7-209ENST00000539197 UMAD1C9J7I0 102 aa-0.54□□□□□ -2.5
CCDC7-209ENST00000539197 IFI27P40305 119 aaPredicted RBP-0.54□□□□□ -2.5
CCDC7-209ENST00000539197 GNG2P59768 71 aa-0.54□□□□□ -2.5
CCDC7-209ENST00000539197 RGPD8O14715 1765 aaPredicted RBP-0.55□□□□□ -2.5
CCDC7-209ENST00000539197 RGPD5Q99666 1765 aa-0.55□□□□□ -2.5
CCDC7-209ENST00000539197 TMEM131LA2VDJ0 1609 aa-0.55□□□□□ -2.5
CCDC7-209ENST00000539197 URB2Q14146 1524 aaKnown RBP-0.55□□□□□ -2.5
CCDC7-209ENST00000539197 AKAP9Q99996 3911 aa-0.55□□□□□ -2.5
CCDC7-209ENST00000539197 UACAQ9BZF9 1416 aa-0.55□□□□□ -2.5
CCDC7-209ENST00000539197 ZNF831Q5JPB2 1677 aa-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 VPS13DQ5THJ4 4388 aa-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 TACC2O95359 2948 aa-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 H0YAA0 97 aa-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 HTTP42858 3142 aa-0.56□□□□□ -2.5
CCDC7-209ENST00000539197 EPG5Q9HCE0 2579 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms