RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 LOC107984640A0A0U1RRK4 108 aa7.36□□□□□ -1.23
SLC28A1-204ENST00000538177 CCDC179H3BU77 68 aa7.36□□□□□ -1.23
SLC28A1-204ENST00000538177 KRTAP7-1Q8IUC3 87 aa7.36□□□□□ -1.23
SLC28A1-204ENST00000538177 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
SLC28A1-204ENST00000538177 FAM168BA1KXE4 195 aa7.36□□□□□ -1.23
SLC28A1-204ENST00000538177 ATP5EP2Q5VTU8 51 aa7.36□□□□□ -1.23
SLC28A1-204ENST00000538177 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
SLC28A1-204ENST00000538177 PRYO14603 147 aa7.35□□□□□ -1.23
SLC28A1-204ENST00000538177 KRTAP4-16G5E9R7 235 aaPredicted RBP7.35□□□□□ -1.23
SLC28A1-204ENST00000538177 M0R2N4 97 aa7.35□□□□□ -1.23
SLC28A1-204ENST00000538177 SPRR1AP35321 89 aa7.35□□□□□ -1.23
SLC28A1-204ENST00000538177 RPL37AP8A6NKH3 93 aa7.33□□□□□ -1.24
SLC28A1-204ENST00000538177 B5MCH6 92 aa7.33□□□□□ -1.24
SLC28A1-204ENST00000538177 UBE2DNLQ8IWF7 75 aa7.33□□□□□ -1.24
SLC28A1-204ENST00000538177 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
SLC28A1-204ENST00000538177 Q6ZRX8 168 aa7.32□□□□□ -1.24
SLC28A1-204ENST00000538177 MRPL55Q7Z7F7 128 aaKnown RBP7.32□□□□□ -1.24
SLC28A1-204ENST00000538177 DHRS4-AS1Q9P1J3 65 aa7.32□□□□□ -1.24
SLC28A1-204ENST00000538177 DYNC2H1Q8NCM8 4307 aaKnown RBP7.32□□□□□ -1.24
SLC28A1-204ENST00000538177 COL7A1Q02388 2944 aa7.32□□□□□ -1.24
SLC28A1-204ENST00000538177 A0A087WVE0 104 aa7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 ATOX1O00244 68 aa7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 FAM19A5Q7Z5A7 132 aaPredicted RBP7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 Q8N377 158 aa7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 ETDCA0A1B0GVM5 59 aa7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 PSCAO43653 123 aa7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 LINC01547P58512 204 aaPredicted RBP7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 Q6ZVQ6 151 aa7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 Q9BRP9 147 aa7.3□□□□□ -1.24
SLC28A1-204ENST00000538177 C16orf90A8MZG2 172 aa7.29□□□□□ -1.24
SLC28A1-204ENST00000538177 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
SLC28A1-204ENST00000538177 A0A096LNI7 61 aa7.27□□□□□ -1.24
SLC28A1-204ENST00000538177 FAM19A1Q7Z5A9 133 aa7.27□□□□□ -1.24
SLC28A1-204ENST00000538177 C3orf22Q8N5N4 141 aa7.27□□□□□ -1.24
SLC28A1-204ENST00000538177 NUPR2A6NF83 97 aa7.27□□□□□ -1.25
SLC28A1-204ENST00000538177 UQCRQO14949 82 aa7.27□□□□□ -1.25
SLC28A1-204ENST00000538177 DEFB105AQ8NG35 78 aa7.27□□□□□ -1.25
SLC28A1-204ENST00000538177 IGLV5-48A0A075B6I7 105 aa7.26□□□□□ -1.25
SLC28A1-204ENST00000538177 COX7CP15954 63 aa7.26□□□□□ -1.25
SLC28A1-204ENST00000538177 DNAH10Q8IVF4 4471 aa7.26□□□□□ -1.25
SLC28A1-204ENST00000538177 REG3GQ6UW15 175 aa7.26□□□□□ -1.25
SLC28A1-204ENST00000538177 CXCL6P80162 114 aa7.25□□□□□ -1.25
SLC28A1-204ENST00000538177 HAMPP81172 84 aa7.25□□□□□ -1.25
SLC28A1-204ENST00000538177 NBDYA0A0U1RRE5 68 aa7.25□□□□□ -1.25
SLC28A1-204ENST00000538177 A0A1W2PNN7 141 aa7.25□□□□□ -1.25
SLC28A1-204ENST00000538177 PLECQ15149 4684 aaKnown RBP7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 IGKV2-24A0A0C4DH68 120 aa7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 LRCOL1A6NCL2 159 aa7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 ERC2-IT1O76042 136 aa7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 ST20-AS1Q8NBB2 130 aa7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 LYSTQ99698 3801 aa7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 TNP2Q05952 138 aa7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
SLC28A1-204ENST00000538177 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.22□□□□□ -1.25
SLC28A1-204ENST00000538177 UBE2BP63146 152 aa7.22□□□□□ -1.25
SLC28A1-204ENST00000538177 C9orf153Q5TBE3 101 aa7.22□□□□□ -1.25
SLC28A1-204ENST00000538177 SS18L2Q9UHA2 77 aa7.22□□□□□ -1.25
SLC28A1-204ENST00000538177 Q6ZRN7 208 aaPredicted RBP7.21□□□□□ -1.26
SLC28A1-204ENST00000538177 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
SLC28A1-204ENST00000538177 CSMD3Q7Z407 3707 aa7.2□□□□□ -1.26
SLC28A1-204ENST00000538177 A0A1B0GW54 56 aa7.2□□□□□ -1.26
SLC28A1-204ENST00000538177 CRYGAP11844 174 aa7.2□□□□□ -1.26
SLC28A1-204ENST00000538177 BCE1O60756 84 aa7.19□□□□□ -1.26
SLC28A1-204ENST00000538177 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
SLC28A1-204ENST00000538177 CHTF8P0CG12 524 aa7.18□□□□□ -1.26
SLC28A1-204ENST00000538177 TENM2Q9NT68 2774 aa7.18□□□□□ -1.26
SLC28A1-204ENST00000538177 A0A1W2PNM2 257 aa7.18□□□□□ -1.26
SLC28A1-204ENST00000538177 NREPQ16612 68 aa7.18□□□□□ -1.26
SLC28A1-204ENST00000538177 C1orf137Q5JT78 98 aa7.18□□□□□ -1.26
SLC28A1-204ENST00000538177 DNAH7Q8WXX0 4024 aa7.17□□□□□ -1.26
SLC28A1-204ENST00000538177 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
SLC28A1-204ENST00000538177 SCXQ7RTU7 201 aa7.17□□□□□ -1.26
SLC28A1-204ENST00000538177 SMIM29Q86T20 159 aa7.17□□□□□ -1.26
SLC28A1-204ENST00000538177 DNHD1Q96M86 4753 aa7.16□□□□□ -1.26
SLC28A1-204ENST00000538177 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
SLC28A1-204ENST00000538177 PRLHP81277 87 aa7.16□□□□□ -1.26
SLC28A1-204ENST00000538177 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
SLC28A1-204ENST00000538177 Q8NBF4 154 aa7.16□□□□□ -1.26
SLC28A1-204ENST00000538177 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
SLC28A1-204ENST00000538177 KRTAP11-1Q8IUC1 163 aa7.15□□□□□ -1.26
SLC28A1-204ENST00000538177 LINC00474Q9P2X8 69 aa7.15□□□□□ -1.26
SLC28A1-204ENST00000538177 SPRR4Q96PI1 79 aa7.15□□□□□ -1.27
SLC28A1-204ENST00000538177 STARD9Q9P2P6 4700 aa7.14□□□□□ -1.27
SLC28A1-204ENST00000538177 H0Y9J4 135 aa7.14□□□□□ -1.27
SLC28A1-204ENST00000538177 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
SLC28A1-204ENST00000538177 IGLV8-61A0A075B6I0 122 aa7.12□□□□□ -1.27
SLC28A1-204ENST00000538177 BPY2O14599 106 aa7.12□□□□□ -1.27
SLC28A1-204ENST00000538177 SMIM20Q8N5G0 67 aa7.12□□□□□ -1.27
SLC28A1-204ENST00000538177 HIGD2AQ9BW72 106 aa7.12□□□□□ -1.27
SLC28A1-204ENST00000538177 TRAV7A0A075B6U4 112 aa7.12□□□□□ -1.27
SLC28A1-204ENST00000538177 F8WEM9 126 aa7.12□□□□□ -1.27
SLC28A1-204ENST00000538177 LINC00476Q8WZB0 136 aa7.12□□□□□ -1.27
SLC28A1-204ENST00000538177 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
SLC28A1-204ENST00000538177 PANO1I0J062 215 aa7.11□□□□□ -1.27
SLC28A1-204ENST00000538177 IGKV4-1P06312 121 aa7.11□□□□□ -1.27
SLC28A1-204ENST00000538177 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
SLC28A1-204ENST00000538177 A0A087WTM6 91 aa7.1□□□□□ -1.27
SLC28A1-204ENST00000538177 Q6ZR54 194 aa7.1□□□□□ -1.27
SLC28A1-204ENST00000538177 SPRR1BP22528 89 aa7.09□□□□□ -1.27
SLC28A1-204ENST00000538177 Q8N9L7 120 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms