RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 Q9BRP9 147 aa4.89□□□□□ -1.63
SPARC-208ENST00000538026 TIMM17BO60830 172 aa4.88□□□□□ -1.63
SPARC-208ENST00000538026 PCP2Q8IVA1 136 aa4.88□□□□□ -1.63
SPARC-208ENST00000538026 TYMSOSQ8TAI1 123 aa4.88□□□□□ -1.63
SPARC-208ENST00000538026 HIGD2AQ9BW72 106 aa4.88□□□□□ -1.63
SPARC-208ENST00000538026 SPANXB1Q9NS25 103 aaPredicted RBP4.88□□□□□ -1.63
SPARC-208ENST00000538026 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
SPARC-208ENST00000538026 ZNF815PA8K554 130 aa4.87□□□□□ -1.63
SPARC-208ENST00000538026 TSPAN13O95857 204 aa4.87□□□□□ -1.63
SPARC-208ENST00000538026 DDTP30046 118 aa4.87□□□□□ -1.63
SPARC-208ENST00000538026 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
SPARC-208ENST00000538026 ETDCA0A1B0GVM5 59 aa4.85□□□□□ -1.63
SPARC-208ENST00000538026 LINC00483Q53H64 154 aa4.85□□□□□ -1.63
SPARC-208ENST00000538026 SNRPEP62304 92 aaKnown RBP4.84□□□□□ -1.63
SPARC-208ENST00000538026 Q6ZRX8 168 aa4.84□□□□□ -1.63
SPARC-208ENST00000538026 MIEN1Q9BRT3 115 aa4.84□□□□□ -1.63
SPARC-208ENST00000538026 SPANXDQ9BXN6 97 aa4.84□□□□□ -1.63
SPARC-208ENST00000538026 PPDPFQ9H3Y8 114 aa4.84□□□□□ -1.63
SPARC-208ENST00000538026 SPANXCQ9NY87 97 aa4.84□□□□□ -1.63
SPARC-208ENST00000538026 TRAV23DV6A0A075B6W5 121 aa4.83□□□□□ -1.64
SPARC-208ENST00000538026 C5orf52A6NGY3 159 aa4.83□□□□□ -1.64
SPARC-208ENST00000538026 LINC00304Q8N9R0 145 aa4.83□□□□□ -1.64
SPARC-208ENST00000538026 C20orf202A1L168 122 aa4.82□□□□□ -1.64
SPARC-208ENST00000538026 ZNF73O43830 326 aaPredicted RBP4.82□□□□□ -1.64
SPARC-208ENST00000538026 S100A7L2Q5SY68 101 aa4.82□□□□□ -1.64
SPARC-208ENST00000538026 ST20-AS1Q8NBB2 130 aa4.82□□□□□ -1.64
SPARC-208ENST00000538026 RETNLBQ9BQ08 111 aa4.82□□□□□ -1.64
SPARC-208ENST00000538026 SMCPP49901 116 aaPredicted RBP4.81□□□□□ -1.64
SPARC-208ENST00000538026 PRR4Q16378 134 aa4.81□□□□□ -1.64
SPARC-208ENST00000538026 GAGE2AQ6NT46 116 aa4.81□□□□□ -1.64
SPARC-208ENST00000538026 MUSTN1Q8IVN3 82 aa4.81□□□□□ -1.64
SPARC-208ENST00000538026 S100A2P29034 98 aa4.8□□□□□ -1.64
SPARC-208ENST00000538026 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
SPARC-208ENST00000538026 Q8NBF4 154 aa4.79□□□□□ -1.64
SPARC-208ENST00000538026 OR13C6PQ8NH95 151 aa4.79□□□□□ -1.64
SPARC-208ENST00000538026 ZNF706Q9Y5V0 76 aaPredicted RBP4.79□□□□□ -1.64
SPARC-208ENST00000538026 S100A6P06703 90 aa4.78□□□□□ -1.64
SPARC-208ENST00000538026 IFITM1P13164 125 aa4.78□□□□□ -1.64
SPARC-208ENST00000538026 C6orf99Q4VX62 202 aa4.78□□□□□ -1.64
SPARC-208ENST00000538026 SPRR1BP22528 89 aa4.77□□□□□ -1.65
SPARC-208ENST00000538026 S100A12P80511 92 aa4.77□□□□□ -1.65
SPARC-208ENST00000538026 MOBPQ13875 183 aa4.77□□□□□ -1.65
SPARC-208ENST00000538026 Q6ZVH6 145 aa4.77□□□□□ -1.65
SPARC-208ENST00000538026 LINC00518Q8N0U6 118 aa4.77□□□□□ -1.65
SPARC-208ENST00000538026 IGLV9-49A0A0B4J1Y8 123 aa4.76□□□□□ -1.65
SPARC-208ENST00000538026 AKR1D1P51857 326 aa4.76□□□□□ -1.65
SPARC-208ENST00000538026 LINC01547P58512 204 aaPredicted RBP4.76□□□□□ -1.65
SPARC-208ENST00000538026 ELOF1P60002 83 aaKnown RBP4.76□□□□□ -1.65
SPARC-208ENST00000538026 CTAG1AP78358 180 aa4.76□□□□□ -1.65
SPARC-208ENST00000538026 SCGB1D1O95968 90 aa4.75□□□□□ -1.65
SPARC-208ENST00000538026 JOSD1Q15040 202 aaPredicted RBP4.75□□□□□ -1.65
SPARC-208ENST00000538026 SPAG11AQ6PDA7 123 aa4.75□□□□□ -1.65
SPARC-208ENST00000538026 SMIM11BQ8TCY0 68 aa4.75□□□□□ -1.65
SPARC-208ENST00000538026 TRBV7-6A0A0J9YX20 115 aa4.74□□□□□ -1.65
SPARC-208ENST00000538026 A4D1N5 150 aa4.74□□□□□ -1.65
SPARC-208ENST00000538026 A6NDN8 102 aa4.74□□□□□ -1.65
SPARC-208ENST00000538026 COX8AP10176 69 aa4.74□□□□□ -1.65
SPARC-208ENST00000538026 COX7BP24311 80 aa4.74□□□□□ -1.65
SPARC-208ENST00000538026 SSBP3-AS1Q7Z2R9 100 aa4.74□□□□□ -1.65
SPARC-208ENST00000538026 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
SPARC-208ENST00000538026 IGLV7-46A0A075B6I9 117 aa4.73□□□□□ -1.65
SPARC-208ENST00000538026 Q8N377 158 aa4.73□□□□□ -1.65
SPARC-208ENST00000538026 DHRS4-AS1Q9P1J3 65 aa4.73□□□□□ -1.65
SPARC-208ENST00000538026 HSBP1L1C9JCN9 74 aa4.72□□□□□ -1.65
SPARC-208ENST00000538026 DLEU1O43261 78 aa4.72□□□□□ -1.65
SPARC-208ENST00000538026 SPINK1P00995 79 aa4.72□□□□□ -1.65
SPARC-208ENST00000538026 HINT1P49773 126 aaPredicted RBP4.72□□□□□ -1.65
SPARC-208ENST00000538026 C2orf91Q6ZV80 131 aa4.72□□□□□ -1.65
SPARC-208ENST00000538026 C14orf144Q96I85 54 aa4.72□□□□□ -1.65
SPARC-208ENST00000538026 CBY1Q9Y3M2 126 aa4.72□□□□□ -1.65
SPARC-208ENST00000538026 IGLV5-48A0A075B6I7 105 aa4.71□□□□□ -1.66
SPARC-208ENST00000538026 TRAV13-2A0A0B4J235 113 aa4.71□□□□□ -1.66
SPARC-208ENST00000538026 A0A0G2JQZ4 141 aa4.71□□□□□ -1.66
SPARC-208ENST00000538026 A0A1B0GWB2 263 aa4.71□□□□□ -1.66
SPARC-208ENST00000538026 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
SPARC-208ENST00000538026 COPS9Q8WXC6 57 aa4.71□□□□□ -1.66
SPARC-208ENST00000538026 PAM16Q9Y3D7 125 aa4.71□□□□□ -1.66
SPARC-208ENST00000538026 KRTAP13-3Q3SY46 172 aa4.7□□□□□ -1.66
SPARC-208ENST00000538026 DEFB105AQ8NG35 78 aa4.7□□□□□ -1.66
SPARC-208ENST00000538026 C12orf57Q99622 126 aa4.7□□□□□ -1.66
SPARC-208ENST00000538026 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
SPARC-208ENST00000538026 SPATA45Q537H7 98 aa4.69□□□□□ -1.66
SPARC-208ENST00000538026 PYY3Q5JQD4 70 aa4.69□□□□□ -1.66
SPARC-208ENST00000538026 C9orf153Q5TBE3 101 aa4.69□□□□□ -1.66
SPARC-208ENST00000538026 TEX49A0A1B0GTD5 131 aa4.68□□□□□ -1.66
SPARC-208ENST00000538026 CFC1BP0CG36 223 aa4.68□□□□□ -1.66
SPARC-208ENST00000538026 CFC1P0CG37 223 aa4.68□□□□□ -1.66
SPARC-208ENST00000538026 TAL2Q16559 108 aa4.68□□□□□ -1.66
SPARC-208ENST00000538026 Q1RN00 199 aa4.68□□□□□ -1.66
SPARC-208ENST00000538026 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
SPARC-208ENST00000538026 FP248Q71RG6 208 aaPredicted RBP4.68□□□□□ -1.66
SPARC-208ENST00000538026 HIST1H4GQ99525 98 aa4.68□□□□□ -1.66
SPARC-208ENST00000538026 HRCT1Q6UXD1 115 aa4.67□□□□□ -1.66
SPARC-208ENST00000538026 HIGD1BQ9P298 99 aa4.67□□□□□ -1.66
SPARC-208ENST00000538026 VAMP8Q9BV40 100 aa4.66□□□□□ -1.66
SPARC-208ENST00000538026 KRTAP4-1Q9BYQ7 146 aa4.66□□□□□ -1.66
SPARC-208ENST00000538026 LAMTOR3Q9UHA4 124 aa4.66□□□□□ -1.66
SPARC-208ENST00000538026 SLC25A20O43772 301 aa4.65□□□□□ -1.67
SPARC-208ENST00000538026 SLC25A34Q6PIV7 304 aa4.65□□□□□ -1.67
SPARC-208ENST00000538026 CDIP1Q9H305 208 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms