RNA–Protein interactions for RNA: ENST00000537380.1

CIITA-203, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best)

Gene CIITA, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-203ENST00000537380 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 M0QXV9 152 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 ZNF73O43830 326 aaPredicted RBP5.94□□□□□ -1.46
CIITA-203ENST00000537380 SPRR1AP35321 89 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 UBE2V1Q13404 147 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 ATXN8Q156A1 80 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 Q6ZSA8 131 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 DIRC1Q969H9 104 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 LINC00167Q96N53 147 aa5.94□□□□□ -1.46
CIITA-203ENST00000537380 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
CIITA-203ENST00000537380 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
CIITA-203ENST00000537380 LST1O00453 97 aa5.93□□□□□ -1.46
CIITA-203ENST00000537380 SNCGO76070 127 aa5.93□□□□□ -1.46
CIITA-203ENST00000537380 TRACP01848 142 aa5.93□□□□□ -1.46
CIITA-203ENST00000537380 FAM19A5Q7Z5A7 132 aaPredicted RBP5.93□□□□□ -1.46
CIITA-203ENST00000537380 LINC01600Q96MT4 127 aa5.93□□□□□ -1.46
CIITA-203ENST00000537380 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
CIITA-203ENST00000537380 TCL1BO95988 128 aa5.92□□□□□ -1.46
CIITA-203ENST00000537380 CHTF8P0CG12 524 aa5.92□□□□□ -1.46
CIITA-203ENST00000537380 INAFM2P0DMQ5 153 aa5.92□□□□□ -1.46
CIITA-203ENST00000537380 C6orf99Q4VX62 202 aa5.92□□□□□ -1.46
CIITA-203ENST00000537380 A0A087WYN8 130 aa5.91□□□□□ -1.46
CIITA-203ENST00000537380 H3BQ85 93 aa5.91□□□□□ -1.46
CIITA-203ENST00000537380 ELOF1P60002 83 aaKnown RBP5.91□□□□□ -1.46
CIITA-203ENST00000537380 LINC01620Q4KN68 170 aa5.91□□□□□ -1.46
CIITA-203ENST00000537380 Q8N1X5 172 aa5.91□□□□□ -1.46
CIITA-203ENST00000537380 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
CIITA-203ENST00000537380 F8W1H4 67 aa5.9□□□□□ -1.46
CIITA-203ENST00000537380 H0Y9J4 135 aa5.9□□□□□ -1.46
CIITA-203ENST00000537380 PANO1I0J062 215 aa5.9□□□□□ -1.46
CIITA-203ENST00000537380 FUSP35637 526 aaKnown RBP eCLIP5.9□□□□□ -1.46
CIITA-203ENST00000537380 LINC00575Q6W349 94 aa5.9□□□□□ -1.46
CIITA-203ENST00000537380 H3BMG7 143 aa5.89□□□□□ -1.47
CIITA-203ENST00000537380 GHRHP01286 108 aa5.89□□□□□ -1.47
CIITA-203ENST00000537380 COX7BP24311 80 aa5.89□□□□□ -1.47
CIITA-203ENST00000537380 REG3GQ6UW15 175 aa5.89□□□□□ -1.47
CIITA-203ENST00000537380 LINC00528Q8N1L1 170 aa5.89□□□□□ -1.47
CIITA-203ENST00000537380 DPH3Q96FX2 82 aa5.89□□□□□ -1.47
CIITA-203ENST00000537380 SLC25A20O43772 301 aa5.88□□□□□ -1.47
CIITA-203ENST00000537380 OCIAD2Q56VL3 154 aa5.88□□□□□ -1.47
CIITA-203ENST00000537380 CLEC2BQ92478 149 aa5.88□□□□□ -1.47
CIITA-203ENST00000537380 DHRS4-AS1Q9P1J3 65 aa5.88□□□□□ -1.47
CIITA-203ENST00000537380 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 hADV29S1A0JD25 119 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 RPL37AP8A6NKH3 93 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 B5MCH6 92 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 H3BT86 120 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 Q6ZRX8 168 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 FAM218AQ96MZ4 157 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 PRO0461Q9UI25 63 aa5.87□□□□□ -1.47
CIITA-203ENST00000537380 ETDCA0A1B0GVM5 59 aa5.86□□□□□ -1.47
CIITA-203ENST00000537380 FAM229AH3BQW9 127 aa5.86□□□□□ -1.47
CIITA-203ENST00000537380 DNAL4O96015 105 aa5.86□□□□□ -1.47
CIITA-203ENST00000537380 UBE2BP63146 152 aa5.86□□□□□ -1.47
CIITA-203ENST00000537380 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.86□□□□□ -1.47
CIITA-203ENST00000537380 PHF5AQ7RTV0 110 aaKnown RBP5.86□□□□□ -1.47
CIITA-203ENST00000537380 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
CIITA-203ENST00000537380 XGP55808 180 aa5.85□□□□□ -1.47
CIITA-203ENST00000537380 PPDPFLQ8WWR9 84 aa5.85□□□□□ -1.47
CIITA-203ENST00000537380 C9JAW5 83 aa5.84□□□□□ -1.47
CIITA-203ENST00000537380 BCE1O60756 84 aa5.84□□□□□ -1.47
CIITA-203ENST00000537380 CIRBP-AS1Q8TBR5 109 aa5.84□□□□□ -1.47
CIITA-203ENST00000537380 FAM30AQ9NZY2 134 aa5.84□□□□□ -1.47
CIITA-203ENST00000537380 TMEM256-PLSCR3K7ERE1 68 aa5.83□□□□□ -1.48
CIITA-203ENST00000537380 ANKRD29Q8N6D5 301 aa5.83□□□□□ -1.48
CIITA-203ENST00000537380 KRTAP4-5Q9BYR2 181 aa5.83□□□□□ -1.48
CIITA-203ENST00000537380 ORMDL1Q9P0S3 153 aa5.83□□□□□ -1.48
CIITA-203ENST00000537380 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
CIITA-203ENST00000537380 VPS13BQ7Z7G8 4022 aa5.83□□□□□ -1.48
CIITA-203ENST00000537380 BAALC-AS2P0C853 105 aa5.82□□□□□ -1.48
CIITA-203ENST00000537380 Q5VSD8 79 aa5.82□□□□□ -1.48
CIITA-203ENST00000537380 SCXQ7RTU7 201 aa5.82□□□□□ -1.48
CIITA-203ENST00000537380 KRTAP13-1Q8IUC0 172 aa5.82□□□□□ -1.48
CIITA-203ENST00000537380 FAT1Q14517 4588 aa5.81□□□□□ -1.48
CIITA-203ENST00000537380 SMCPP49901 116 aaPredicted RBP5.81□□□□□ -1.48
CIITA-203ENST00000537380 KRTAP11-1Q8IUC1 163 aa5.81□□□□□ -1.48
CIITA-203ENST00000537380 Q9BRP9 147 aa5.81□□□□□ -1.48
CIITA-203ENST00000537380 FAM19A1Q7Z5A9 133 aa5.8□□□□□ -1.48
CIITA-203ENST00000537380 PSORS1C2Q9UIG4 136 aa5.8□□□□□ -1.48
CIITA-203ENST00000537380 IGLV5-48A0A075B6I7 105 aa5.79□□□□□ -1.48
CIITA-203ENST00000537380 SMR3BP02814 79 aaPredicted RBP5.79□□□□□ -1.48
CIITA-203ENST00000537380 Q6ZQY7 126 aa5.79□□□□□ -1.48
CIITA-203ENST00000537380 TEN1Q86WV5 123 aa5.79□□□□□ -1.48
CIITA-203ENST00000537380 SMCR5Q8TEV8 140 aa5.79□□□□□ -1.48
CIITA-203ENST00000537380 SRRM2Q9UQ35 2752 aaKnown RBP5.79□□□□□ -1.48
CIITA-203ENST00000537380 PLA2G1BP04054 148 aaKnown RBP5.78□□□□□ -1.48
CIITA-203ENST00000537380 UBE2AP49459 152 aa5.78□□□□□ -1.48
CIITA-203ENST00000537380 C21orf62-AS1Q17RA5 79 aa5.78□□□□□ -1.48
CIITA-203ENST00000537380 OBSCN-AS1Q96MR7 158 aa5.78□□□□□ -1.48
CIITA-203ENST00000537380 J3QL48 77 aa5.77□□□□□ -1.49
CIITA-203ENST00000537380 ZNF861PO60384 105 aa5.77□□□□□ -1.49
CIITA-203ENST00000537380 JMJD7-PLA2G4BH0Y9G9 81 aa5.76□□□□□ -1.49
CIITA-203ENST00000537380 IGLV7-43P04211 117 aa5.76□□□□□ -1.49
CIITA-203ENST00000537380 SPRR1BP22528 89 aa5.76□□□□□ -1.49
CIITA-203ENST00000537380 LINC01547P58512 204 aaPredicted RBP5.76□□□□□ -1.49
CIITA-203ENST00000537380 HAMPP81172 84 aa5.76□□□□□ -1.49
CIITA-203ENST00000537380 TEX49A0A1B0GTD5 131 aa5.75□□□□□ -1.49
CIITA-203ENST00000537380 PRLHP81277 87 aa5.75□□□□□ -1.49
CIITA-203ENST00000537380 ETDBQ3ZM63 59 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms