RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CHTOPQ9Y3Y2 248 aaKnown RBP4.47□□□□□ -1.69
CHFR-211ENST00000535897 TRAV12-1A0A0B4J245 112 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 NCR3O14931 201 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 CFC1BP0CG36 223 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 COL5A1-AS1Q5SY13 56 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 TMEM170BQ5T4T1 132 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 XP32Q5T750 250 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 LCE2CQ5TA81 110 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 Q8N377 158 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 UQCR10Q9UDW1 63 aa4.46□□□□□ -1.7
CHFR-211ENST00000535897 LINC00310P59036 64 aa4.45□□□□□ -1.7
CHFR-211ENST00000535897 KRTDAPP60985 99 aa4.45□□□□□ -1.7
CHFR-211ENST00000535897 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
CHFR-211ENST00000535897 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
CHFR-211ENST00000535897 PLNP26678 52 aa4.44□□□□□ -1.7
CHFR-211ENST00000535897 MT1HP80294 61 aa4.44□□□□□ -1.7
CHFR-211ENST00000535897 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
CHFR-211ENST00000535897 MEIG1Q5JSS6 88 aa4.44□□□□□ -1.7
CHFR-211ENST00000535897 PMCHL2Q9BQD1 86 aa4.44□□□□□ -1.7
CHFR-211ENST00000535897 CBY1Q9Y3M2 126 aa4.44□□□□□ -1.7
CHFR-211ENST00000535897 IGLV8-61A0A075B6I0 122 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 TRBV10-3A0A0K0K1G6 114 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 C11orf86A6NJI1 115 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 HSBP1L1C9JCN9 74 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 SYS1-DBNDD2H3BUS1 97 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 DPM2O94777 84 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 HERVK_113P61574 105 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 C9orf153Q5TBE3 101 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 SSBP3-AS1Q7Z2R9 100 aa4.43□□□□□ -1.7
CHFR-211ENST00000535897 M0R2T5 61 aa4.42□□□□□ -1.7
CHFR-211ENST00000535897 IGKCP01834 107 aa4.42□□□□□ -1.7
CHFR-211ENST00000535897 SMIM13P0DJ93 91 aa4.42□□□□□ -1.7
CHFR-211ENST00000535897 SPRR1AP35321 89 aa4.42□□□□□ -1.7
CHFR-211ENST00000535897 PCOTHQ58A44 107 aa4.42□□□□□ -1.7
CHFR-211ENST00000535897 KCNQ1DNQ9H478 68 aa4.42□□□□□ -1.7
CHFR-211ENST00000535897 KRTAP4-16G5E9R7 235 aaPredicted RBP4.41□□□□□ -1.7
CHFR-211ENST00000535897 ERC2-IT1O76042 136 aa4.41□□□□□ -1.7
CHFR-211ENST00000535897 C3orf79P0CE67 100 aa4.41□□□□□ -1.7
CHFR-211ENST00000535897 MIR7-3HGQ8N6C7 128 aa4.41□□□□□ -1.7
CHFR-211ENST00000535897 PRO1933Q9H354 126 aa4.41□□□□□ -1.7
CHFR-211ENST00000535897 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
CHFR-211ENST00000535897 B5MCH6 92 aa4.4□□□□□ -1.71
CHFR-211ENST00000535897 DLEU1O43261 78 aa4.4□□□□□ -1.71
CHFR-211ENST00000535897 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.71
CHFR-211ENST00000535897 LINC01545Q5VT33 79 aa4.4□□□□□ -1.71
CHFR-211ENST00000535897 A0A1B0GV90 55 aa4.39□□□□□ -1.71
CHFR-211ENST00000535897 TMEM223A0PJW6 202 aa4.39□□□□□ -1.71
CHFR-211ENST00000535897 SNHG12Q9BXW3 62 aa4.39□□□□□ -1.71
CHFR-211ENST00000535897 LGALS3P17931 250 aaKnown RBP4.38□□□□□ -1.71
CHFR-211ENST00000535897 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
CHFR-211ENST00000535897 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
CHFR-211ENST00000535897 HERV-K104P63124 156 aa4.38□□□□□ -1.71
CHFR-211ENST00000535897 SPATA45Q537H7 98 aa4.38□□□□□ -1.71
CHFR-211ENST00000535897 COX6B2Q6YFQ2 88 aa4.38□□□□□ -1.71
CHFR-211ENST00000535897 Q6ZRX8 168 aa4.38□□□□□ -1.71
CHFR-211ENST00000535897 Q9BRP9 147 aa4.38□□□□□ -1.71
CHFR-211ENST00000535897 MYMXA0A1B0GTQ4 84 aa4.37□□□□□ -1.71
CHFR-211ENST00000535897 LEPROTO15243 131 aa4.37□□□□□ -1.71
CHFR-211ENST00000535897 HRCT1Q6UXD1 115 aa4.37□□□□□ -1.71
CHFR-211ENST00000535897 LIMD2Q9BT23 127 aa4.37□□□□□ -1.71
CHFR-211ENST00000535897 S100A7L2Q5SY68 101 aa4.36□□□□□ -1.71
CHFR-211ENST00000535897 SLC25A34Q6PIV7 304 aa4.36□□□□□ -1.71
CHFR-211ENST00000535897 ATOH7Q8N100 152 aa4.36□□□□□ -1.71
CHFR-211ENST00000535897 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
CHFR-211ENST00000535897 E9PLD3 99 aa4.35□□□□□ -1.71
CHFR-211ENST00000535897 J3QQQ9 107 aa4.35□□□□□ -1.71
CHFR-211ENST00000535897 NMUP48645 174 aa4.35□□□□□ -1.71
CHFR-211ENST00000535897 ST20-AS1Q8NBB2 130 aa4.35□□□□□ -1.71
CHFR-211ENST00000535897 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
CHFR-211ENST00000535897 TRBV10-2A0A0K0K1G8 114 aa4.34□□□□□ -1.71
CHFR-211ENST00000535897 A6NDN8 102 aa4.34□□□□□ -1.71
CHFR-211ENST00000535897 IGLV6-57P01721 117 aa4.34□□□□□ -1.71
CHFR-211ENST00000535897 UBE2V1Q13404 147 aa4.34□□□□□ -1.71
CHFR-211ENST00000535897 SPANXB1Q9NS25 103 aaPredicted RBP4.34□□□□□ -1.71
CHFR-211ENST00000535897 ZNF815PA8K554 130 aa4.33□□□□□ -1.72
CHFR-211ENST00000535897 GTF2H5Q6ZYL4 71 aa4.33□□□□□ -1.72
CHFR-211ENST00000535897 K7ERU9 68 aa4.32□□□□□ -1.72
CHFR-211ENST00000535897 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
CHFR-211ENST00000535897 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
CHFR-211ENST00000535897 SCGB1D4Q6XE38 83 aa4.32□□□□□ -1.72
CHFR-211ENST00000535897 H7C2G1 150 aa4.31□□□□□ -1.72
CHFR-211ENST00000535897 COX8AP10176 69 aa4.31□□□□□ -1.72
CHFR-211ENST00000535897 COPS9Q8WXC6 57 aa4.31□□□□□ -1.72
CHFR-211ENST00000535897 HIGD1BQ9P298 99 aa4.31□□□□□ -1.72
CHFR-211ENST00000535897 LOC107984156A0A0G2JMH3 177 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 NDUFC2O95298 119 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 TSPEAR-AS2P59090 65 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 NPC2P61916 151 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 TAL2Q16559 108 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 ANKRD39Q53RE8 183 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 ARL17AQ8IVW1 177 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 LAMTOR3Q9UHA4 124 aa4.3□□□□□ -1.72
CHFR-211ENST00000535897 A0A0J9YXY3 114 aa4.29□□□□□ -1.72
CHFR-211ENST00000535897 HSD52Q0P140 79 aa4.29□□□□□ -1.72
CHFR-211ENST00000535897 BATFQ16520 125 aa4.29□□□□□ -1.72
CHFR-211ENST00000535897 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
CHFR-211ENST00000535897 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
CHFR-211ENST00000535897 J3QR89 54 aa4.28□□□□□ -1.72
CHFR-211ENST00000535897 TIMM17BO60830 172 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms