RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
HDAC4-214ENST00000535493 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
HDAC4-214ENST00000535493 LINC00528Q8N1L1 170 aa8.82□□□□□ -1
HDAC4-214ENST00000535493 TMEM254Q8TBM7 123 aa8.82□□□□□ -1
HDAC4-214ENST00000535493 STAB1Q9NY15 2570 aa8.82□□□□□ -1
HDAC4-214ENST00000535493 C15orf56Q8N910 161 aa8.82□□□□□ -1
HDAC4-214ENST00000535493 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
HDAC4-214ENST00000535493 RPL37AP8A6NKH3 93 aa8.81□□□□□ -1
HDAC4-214ENST00000535493 M0R378 163 aa8.81□□□□□ -1
HDAC4-214ENST00000535493 IGKV4-1P06312 121 aa8.81□□□□□ -1
HDAC4-214ENST00000535493 FAM229BQ4G0N7 80 aa8.81□□□□□ -1
HDAC4-214ENST00000535493 EPM2AB3EWF7 344 aa8.8□□□□□ -1
HDAC4-214ENST00000535493 KPRPQ5T749 579 aaPredicted RBP8.8□□□□□ -1
HDAC4-214ENST00000535493 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
HDAC4-214ENST00000535493 IGKV2D-24A0A075B6R9 120 aa8.79□□□□□ -1
HDAC4-214ENST00000535493 COL6A5A8TX70 2615 aa8.79□□□□□ -1
HDAC4-214ENST00000535493 SERTAD4-AS1Q5TG53 156 aa8.79□□□□□ -1
HDAC4-214ENST00000535493 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
HDAC4-214ENST00000535493 BCE1O60756 84 aa8.78□□□□□ -1
HDAC4-214ENST00000535493 Q6ZTC4 211 aa8.78□□□□□ -1
HDAC4-214ENST00000535493 WIPF1O43516 503 aa8.78□□□□□ -1
HDAC4-214ENST00000535493 KRTAP26-1Q6PEX3 210 aa8.78□□□□□ -1
HDAC4-214ENST00000535493 INAFM1C9JVW0 142 aa8.77□□□□□ -1.01
HDAC4-214ENST00000535493 EGFEM1PQ0D2K5 195 aa8.77□□□□□ -1.01
HDAC4-214ENST00000535493 FAM30AQ9NZY2 134 aa8.77□□□□□ -1.01
HDAC4-214ENST00000535493 FAM168BA1KXE4 195 aa8.76□□□□□ -1.01
HDAC4-214ENST00000535493 Q8N377 158 aa8.76□□□□□ -1.01
HDAC4-214ENST00000535493 ESRGQ1W209 222 aa8.76□□□□□ -1.01
HDAC4-214ENST00000535493 LYSTQ99698 3801 aa8.76□□□□□ -1.01
HDAC4-214ENST00000535493 A0A0G2JQZ4 141 aa8.75□□□□□ -1.01
HDAC4-214ENST00000535493 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
HDAC4-214ENST00000535493 LRCOL1A6NCL2 159 aa8.75□□□□□ -1.01
HDAC4-214ENST00000535493 ST20-AS1Q8NBB2 130 aa8.75□□□□□ -1.01
HDAC4-214ENST00000535493 KMT2BQ9UMN6 2715 aaPredicted RBP8.75□□□□□ -1.01
HDAC4-214ENST00000535493 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 NBEAL1Q6ZS30 2694 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 NKAPP1Q8N9T2 125 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 H3BQ85 93 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 C7orf33Q8WU49 177 aa8.74□□□□□ -1.01
HDAC4-214ENST00000535493 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
HDAC4-214ENST00000535493 PKIGQ9Y2B9 76 aa8.73□□□□□ -1.01
HDAC4-214ENST00000535493 SYCNQ0VAF6 134 aa8.71□□□□□ -1.01
HDAC4-214ENST00000535493 PRYO14603 147 aa8.71□□□□□ -1.02
HDAC4-214ENST00000535493 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
HDAC4-214ENST00000535493 A0A1W2PNM2 257 aa8.7□□□□□ -1.02
HDAC4-214ENST00000535493 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
HDAC4-214ENST00000535493 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
HDAC4-214ENST00000535493 PRB2P02812 416 aaPredicted RBP8.7□□□□□ -1.02
HDAC4-214ENST00000535493 Q9BRP9 147 aa8.7□□□□□ -1.02
HDAC4-214ENST00000535493 DNAH10Q8IVF4 4471 aa8.7□□□□□ -1.02
HDAC4-214ENST00000535493 NDUFC1O43677 76 aa8.69□□□□□ -1.02
HDAC4-214ENST00000535493 CASC10Q5T4H9 136 aa8.69□□□□□ -1.02
HDAC4-214ENST00000535493 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
HDAC4-214ENST00000535493 FUSP35637 526 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDAC4-214ENST00000535493 ERC2-IT1O76042 136 aa8.68□□□□□ -1.02
HDAC4-214ENST00000535493 PRR4Q16378 134 aa8.68□□□□□ -1.02
HDAC4-214ENST00000535493 PRO0628Q9UI54 55 aa8.68□□□□□ -1.02
HDAC4-214ENST00000535493 KCNQ1DNQ9H478 68 aa8.67□□□□□ -1.02
HDAC4-214ENST00000535493 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
HDAC4-214ENST00000535493 TENM2Q9NT68 2774 aa8.65□□□□□ -1.02
HDAC4-214ENST00000535493 MRAPQ8TCY5 172 aa8.65□□□□□ -1.03
HDAC4-214ENST00000535493 IGLV5-48A0A075B6I7 105 aa8.64□□□□□ -1.03
HDAC4-214ENST00000535493 K7EQZ3 153 aa8.64□□□□□ -1.03
HDAC4-214ENST00000535493 Q6ZRX8 168 aa8.64□□□□□ -1.03
HDAC4-214ENST00000535493 ETDCA0A1B0GVM5 59 aa8.63□□□□□ -1.03
HDAC4-214ENST00000535493 KRTAP10-11P60412 298 aa8.63□□□□□ -1.03
HDAC4-214ENST00000535493 KRTAP7-1Q8IUC3 87 aa8.63□□□□□ -1.03
HDAC4-214ENST00000535493 DEFB131BA0A096LNP1 70 aa8.62□□□□□ -1.03
HDAC4-214ENST00000535493 UBE2BP63146 152 aa8.61□□□□□ -1.03
HDAC4-214ENST00000535493 DSCR10P59022 87 aa8.61□□□□□ -1.03
HDAC4-214ENST00000535493 CMYA5Q8N3K9 4069 aa8.6□□□□□ -1.03
HDAC4-214ENST00000535493 IGLV1-50A0A075B6I6 118 aa8.6□□□□□ -1.03
HDAC4-214ENST00000535493 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.03
HDAC4-214ENST00000535493 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
HDAC4-214ENST00000535493 LINC01556Q5JQF7 62 aa8.59□□□□□ -1.03
HDAC4-214ENST00000535493 Q8NBF4 154 aa8.58□□□□□ -1.04
HDAC4-214ENST00000535493 DHRS4-AS1Q9P1J3 65 aa8.58□□□□□ -1.04
HDAC4-214ENST00000535493 TNP2Q05952 138 aa8.57□□□□□ -1.04
HDAC4-214ENST00000535493 DNAH1Q9P2D7 4330 aa8.56□□□□□ -1.04
HDAC4-214ENST00000535493 J3QKU1 62 aa8.56□□□□□ -1.04
HDAC4-214ENST00000535493 WFDC13Q8IUB5 93 aa8.56□□□□□ -1.04
HDAC4-214ENST00000535493 C1orf64Q8NEQ6 169 aa8.56□□□□□ -1.04
HDAC4-214ENST00000535493 C11orf45Q8TAV5 145 aa8.56□□□□□ -1.04
HDAC4-214ENST00000535493 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.55□□□□□ -1.04
HDAC4-214ENST00000535493 H3BNG1 76 aa8.54□□□□□ -1.04
HDAC4-214ENST00000535493 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
HDAC4-214ENST00000535493 PRLHP81277 87 aa8.54□□□□□ -1.04
HDAC4-214ENST00000535493 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
HDAC4-214ENST00000535493 STAB2Q8WWQ8 2551 aa8.54□□□□□ -1.04
HDAC4-214ENST00000535493 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
HDAC4-214ENST00000535493 LINC00476Q8WZB0 136 aa8.53□□□□□ -1.04
HDAC4-214ENST00000535493 PSPHP1O15172 72 aa8.53□□□□□ -1.04
HDAC4-214ENST00000535493 PSCAO43653 123 aa8.52□□□□□ -1.05
HDAC4-214ENST00000535493 LINC00588Q9Y4M8 146 aa8.52□□□□□ -1.05
HDAC4-214ENST00000535493 hDV103S1A0JD37 113 aa8.52□□□□□ -1.05
HDAC4-214ENST00000535493 SPRR1AP35321 89 aa8.52□□□□□ -1.05
HDAC4-214ENST00000535493 SPRR4Q96PI1 79 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms